CX671609

Overview
NameCX671609
Unique NameCX671609
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 2.143e-41
Identity = 95/195 (48.72%), Postives = 115/195 (58.97%), Query Frame = -1
Query:  277 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 843
            S +G LE       GK ISLSEQ LVDC+ A  NQGCNGGL   AF+YIK NGGLD+EE+YPY  KDG CK+ +E         V+I    E  L  AV  V P+SVA +      +FY SG+Y    C +  +D  H V+ VGYG E    +   YWL+KNSWG  WG  GY K+   + N CG+AT ASYPVV
Sbjct:  142 SASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEFAVANDTGFVDIP-QQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLD--HGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 4.774e-41
Identity = 93/195 (47.69%), Postives = 116/195 (59.49%), Query Frame = -1
Query:  277 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 843
            S +G LE       GK ISLSEQ LVDC+    NQGCNGGL   AF+YIK NGGLD+EE+YPY  KDG CK+ +E         V+I    E  L  AV  V P+SVA +      +FY SG+Y    C +   D++H V+ VGYG E    +   YWL+KNSWG+ WG  GY K+   + N CG+AT ASYP+V
Sbjct:  142 SASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEYAVANDTGFVDIP-QQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSS--KDLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDRNNHCGLATAASYPIV 333          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 6.235e-41
Identity = 91/195 (46.67%), Postives = 119/195 (61.03%), Query Frame = -1
Query:  277 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 843
            S TGSLE    +   + I LSEQ L+DC  +    GC+GG    AF+Y+K NGGL TEE+YPY G+   C++ +EN    V D V I  G+E+ L  AV  V P+SVA +   G F+FY SG+Y   +C    + +NHAV+ VGYG E    DG  +WL+KNSWGE WG  GY K+     N CGIAT ++YP+V
Sbjct:  142 SATGSLEGQMFRKTERLIPLSEQNLLDCMGSNVTHGCSGGFMQYAFQYVKDNGGLATEESYPYRGQGRECRYHAENSAANVRDFVQIP-GSEEALMKAVAKVGPISVAVDASHGSFQFYGSGIYYEPQCKR--VHLNHAVLVVGYGFEGEESDGNSFWLVKNSWGEEWGMKGYMKLAKDWSNHCGIATYSTYPIV 333          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 6.235e-41
Identity = 88/191 (46.07%), Postives = 124/191 (64.92%), Query Frame = -1
Query:  280 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGK-DGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPV 843
            STTGS+E       GK +SLSEQ ++DC+ +F N+GCNGGL + AFEYI  N GL++EE YPY  K +  CKF   +V  ++     I  G E++LQ+A+ L+ PVSVA +   + F+ Y +GVY    C +   D++H V+AVG G ++G  Y+++KNSWG +WG +GY  M   K N CGI+T ASYP+
Sbjct:  149 STTGSVEGVTAIKTGKLVSLSEQNILDCSSSFGNEGCNGGLMTNAFEYIIKNNGLNSEEQYPYEMKVNDECKFQEGSVAAKITSYKEIEAGDENDLQNAL-LLNPVSVAIDASHNSFQLYTAGVYYEPACSSE--DLDHGVLAVGMGTDNGEDYYIVKNSWGPSWGLNGYIHMARNKDNNCGISTMASYPI 336          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.143e-41
Identity = 85/190 (44.74%), Postives = 119/190 (62.63%), Query Frame = -1
Query:  280 TTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENV-GVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPV 840
            +TGSLE       G+ +SLSEQQLVDCA    +QGC GG  S AF+Y+   G L TE  YPY  ++G+C+  +    GV +   VN+T G+E  LQ+A+    PV++A +  VD FR+Y SGVY++  C N   D++H V+A+GYG   G  Y+L+KNSW  NWG  GY  M     N+CG+++ A+YP+
Sbjct:  338 STGSLEGTNCVTNGELVSLSEQQLVDCAILTGSQGCGGGFASSAFQYVMEIGSLATESNYPYLMQNGLCRDRTVTPSGVSITGYVNVTSGSESALQNAIATTGPVAIAIDASVDDFRYYMSGVYNNPACKNGLDDLDHEVLAIGYGTYQGQDYFLVKNSWSTNWGMDGYVYMARNDNNLCGVSSQATYPI 527          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.389e-40
Identity = 92/195 (47.18%), Postives = 114/195 (58.46%), Query Frame = -1
Query:  277 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 843
            S TG+LE    +  GK +SLSEQ LVDC+    N+GCNGGL   AF+Y+  NGGLD+EE+YPY   +  CK++ E         V+I    E  L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D   YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct:  142 SATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVADNGGLDSEESYPYEATEESCKYNPEYSVANDTGFVDIP-KQEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDNSKYWLVKNSWGEEWGMGGYIKMAKDRRNHCGIASAASYPTV 333          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.814e-40
Identity = 91/192 (47.40%), Postives = 115/192 (59.90%), Query Frame = -1
Query:  277 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 843
            S TG+LE    +  GK +SLSEQ LVD ++   NQGCNGGL   AF+YIK NGGLD+EE+YPY   D  C +  E    +    V+I    E  L  AV  V P+SVA +     F+FYKSG+Y    C +   D++H V+ VGYG E     +W++KNSWG  WG+ GY KM   + N CGIAT ASYP V
Sbjct:   29 SATGALEGQMFRKTGKLVSLSEQNLVDSSRPQGNQGCNGGLMDNAFQYIKENGGLDSEESYPYEATDTSCNYKPEYSAAKDTGFVDIP-QREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSS--KDLDHGVLVVGYGFEGTNNKFWIVKNSWGPEWGNKGYVKMAKDQNNHCGIATAASYPTV 217          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.369e-40
Identity = 89/192 (46.35%), Postives = 112/192 (58.33%), Query Frame = -1
Query:  277 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 843
            S   +LE A+    G  +SLSEQ LVDC+ ++ NQGCNGG P QA++YI  N G+DTE +YPY   D  C++ + N+G  V   V    G E  LQHAV    PVSV  +     F  Y  GVY    C +     NHAV AVGYG + +G  YW++KNSWG  WG+ GY KM   + N C IAT + YPVV
Sbjct:  134 SAVAALEGAHFLKTGDLVSLSEQNLVDCSSSYGNQGCNGGWPYQAYQYIIANRGIDTESSYPYKAIDDNCRYDAGNIGATVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQSSFGSYGGGVYYEPNCDS--WYANHAVTAVGYGTDANGGDYWIVKNSWGAWWGESGYIKMARNRDNNCAIATYSVYPVV 323          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.094e-40
Identity = 91/196 (46.43%), Postives = 118/196 (60.20%), Query Frame = -1
Query:  277 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 843
            S TG+LE    +  GK +SLSEQ LVDC++   NQGCNGGL   AF+Y+K NGGLDTEE+YPY G++   C +  E         V+I    E  L  AV  V P+SVA +     F+FYKSG+Y    C +   D++H V+ VGYG E    +   +W++KNSWG  WG +GY KM   + N CGI+T ASYP V
Sbjct:  142 SATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRETNSCTYKPECSAANDTGFVDIP-QREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSS--KDLDHGVLVVGYGFEGTDSNSSKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGISTAASYPTV 334          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 4.041e-40
Identity = 91/210 (43.33%), Postives = 122/210 (58.10%), Query Frame = -1
Query:  277 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGV-------------------PYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 843
            STTGS E A+ Q+ G+ +SLSEQ L+DC+    N GC+GGL + AFEYI  N G+DTE +YPY  ++G C++ SEN G  +     +T G+E  L+ AV  V PVSVA +     F+ Y SG+Y   +C +  +D  H V+AVGYG   G                     YW++KNSWG +WG  GY  M   + N CGIA+ AS+PVV
Sbjct:  140 STTGSTEGAHFQSKGELVSLSEQNLIDCST--ENSGCDGGLMTYAFEYIINNNGIDTESSYPYKAENGKCEYKSENSGATLSSYKTVTAGSESSLESAVN-VNPVSVAIDASHQSFQLYTSGIYYEPECSSENLD--HGVLAVGYGSGSGSSSGQSSGQSSGNLSASSSNEYWIVKNSWGTSWGIEGYILMSRNRDNNCGIASSASFPVV 344          
The following BLAST results are available for this feature:
BLAST of CX671609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
CATL1_MOUSE2.143e-4148.72Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CATL1_RAT4.774e-4147.69Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
TEST2_RAT6.235e-4146.67Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
CYSP3_DICDI6.235e-4146.07Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
CFAD_DICDI8.143e-4144.74Counting factor associated protein D OS=Dictyostel... [more]
CATL1_CERAE1.389e-4047.18Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CATL1_SHEEP1.814e-4047.40Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]
CRUST_PANBO2.369e-4046.35Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CATL1_PIG3.094e-4046.43Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CYSP5_DICDI4.041e-4043.33Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_12B04_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B04-D8-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671609 ID=CX671609; Name=CX671609; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTTTTTTGCATTGACAAAATATATATAACATCGNTTGGTG
TCCTAGTCACAATGACTGTTTACATGGACATAGATCTCAGAATTTATTTT
GAACATCAAGCAGCCATGCATTGCTATTGTAGATTATATGGACATTAATC
TCCGAATTTATTTCGTACATAAAGCCAACCATTCTGCTATCATTCTTGAG
TGAAATAATATAAGTTTTATGAGCAAATGACTTGCTGATAGCCAGATCCA
ACTATTTCTTCAGGAGCAGACTAAGCCACAACTGGGTATGATGCACAAGT
TGCAATACCACACATGTTCTTCCCCATCTCCATCTTAAAGTAGCCATGAT
CGCCCCAGTTCTCTCCCCAAGAGTTCTTAATCAGCCAATATGGAACACCA
TCTTCAACTCCGTACCCAACAGCAACGACGGCATGGTTCACATCCATGGG
AGTATTTCCACATTTAGTGCTGCTGTAAACTCCACTCTTGTAAAATCGGA
ATCCATCTACTACTTCAAATGCCACACTCACAGGTCGAACAAGACCAACT
GCATGCTGTAATTCATCTTCAGCACCCAAGGTAATGTTGACTGAGTCCAG
GACTTGGACGCCAACATTTTCAGATGAGAATTTGCAGACACCATCTTTTC
CGGTGTAGGGATATGCTTCCTCAGTATCAAGGCCACCATTGTACTTGATG
TATTCAAAGGCTTGGGATGGCAACCCACCATTGCATCCCTGGTTGTTGAA
AGCTTGGGCACAGTCTACAAGCTGCTGTTCTGACAAAGAGATACCCTTTC
CAAAGGCCTGGTGGTAAGCAGCCTCAAGAGATCCAGTCGTGCT
back to top