CX671609

Overview
NameCX671609
Unique NameCX671609
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.139e-34
Identity = 82/194 (42.27%), Postives = 120/194 (61.86%), Query Frame = -1
Query:  280 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKME----MGKNMCGIATCASYPV 843
            S   ++E+      G  ISLSEQ+LVDC +++N +GC+GGL   AFE++  NGG+DTEE YPY  ++GVC    +N  V  +DS  ++ +  E  LQ AV   +PVS+A E     F+ YKSG+++  KCG     V+H VV  GYG E+G+ YW+++NSWG N  ++GY +++        +CG+A   SYPV
Sbjct:   46 SAVAAMESINAIVTGNLISLSEQELVDCDRSYN-EGCDGGLMDYAFEFVIKNGGIDTEEDYPYKERNGVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVA-HQPVSIALEAGGRDFQHYKSGIFTG-KCGTA---VDHGVVIAGYGTENGMDYWIVRNSWGANCRENGYLRVQRNVSSSSGLCGLAIEPSYPV 233          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.314e-34
Identity = 88/204 (43.14%), Postives = 115/204 (56.37%), Query Frame = -1
Query:  262 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS----SENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYPVVA*SAP 843
            ST  S+E       G  +SLSEQ+L+DC  A +N GC GGL   AFEYIK NGGL TE AYPY    G C  +    +  V V +    ++   +E++L  AV   +PVSVA E     F FY  GV++    G+   +++H V  VGYGV EDG  YW +KNSWG +WG+ GY ++E        +CGIA  ASYPV   + P
Sbjct:  162 STVVSVEGINAIRTGSLVSLSEQELIDCDTA-DNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVA-NQPVSVAVEASGKAFMFYSEGVFT----GDCGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVKTYNKP 359          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.314e-34
Identity = 85/195 (43.59%), Postives = 115/195 (58.97%), Query Frame = -1
Query:  283 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKF-SSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKN----MCGIATCASYP 843
            S  G++E       G+ ISLSEQ+LVDC + F N GC+GG+ + AFE+I  NGG++T++ YPY   D G+C    + N  V  +D   ++    E  L+ AV   +PVSVA E     F+ YKSGV + T CG   + ++H VV VGYG   G  YW+I+NSWG NWGD GY K++   +     CGIA   SYP
Sbjct:  158 SAVGAVEGINQITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNANDLGLCNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVA-HQPVSVAIEASSQAFQLYKSGVMTGT-CG---ISLDHGVVVVGYGSTSGEDYWIIRNSWGLNWGDSGYVKLQRNIDDPFGKCGIAMMPSYP 347          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.259e-33
Identity = 78/194 (40.21%), Postives = 108/194 (55.67%), Query Frame = -1
Query:  277 STTGSLEAAYHQAFGKGISLSEQQLVDCA--QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD--GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVV 843
            S  G+LE       GK +SLS Q LVDC+  + + N+GC GG  ++AF+YI  +  +D+E +YPY   D  C +  +N        + +  G E+ L+ AV    PVSV  +      F  Y+SGVY    C     ++NH V+ VGYG  DG  YWL+KNSWG ++GD GY +M    KN CGIA+  SYP +
Sbjct:  141 SAEGALEGQLKLKTGKLVSLSAQNLVDCSTEEKYGNKGCGGGFMTEAFQYI-IDTSIDSEASYPYKAMDEKCLYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGIDDASHSSFFLYQSGVYDDPSCTE---NMNHGVLVVGYGTLDGKDYWLVKNSWGLHFGDQGYIRMARNNKNHCGIASYCSYPEI 330          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.644e-33
Identity = 81/180 (45.00%), Postives = 106/180 (58.89%), Query Frame = -1
Query:  304 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 843
            S   ++E+ YH      + LSEQQLVDC +   N GCNGGL S AFE I   GG+  E  YPYTG DGVCK ++  V  Q+       L +E +L+  +    PVSVA +VVD    YKSGV    K  +    +NH V+ VGYG E+ V YW +KNSWG +WG+ G+F+++   N CGI
Sbjct:  161 SAVANIESLYHIKHNVSLDLSEQQLVDCDKV--NNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVDGVCKNTTRYV--QLSGCYAYDLRSEKKLRQVLHEKGPVSVAIDVVD-LTNYKSGV---AKHCSVDHGLNHGVLLVGYGQENDVKYWTLKNSWGSDWGEQGFFRIKRDVNSCGI 332          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.664e-33
Identity = 73/193 (37.82%), Postives = 112/193 (58.03%), Query Frame = -1
Query:  274 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG--FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVVA 843
            ST  ++E+      G  + LS QQLVDC+ ++ N GCNGG     FEY+K NG L+++  YPY+GK+  CK + ++  V  L        +E  L+ AVG + P+S    VV G   + Y  G++  + C     +++H V  VGYG+E+G  YW+IKN+WG +WG+ GY ++     + CG+   ASYP++A
Sbjct:  138 STAAAIESQSAIKSGSKVPLSPQQLVDCSTSYGNHGCNGGFAVNGFEYVKDNG-LESDADYPYSGKEDKCKANDKSRSVVELTGYKKVTASETSLKEAVGTIGPISA---VVFGKPMKSYGGGIFDDSSCLGD--NLHHGVNVVGYGIENGQKYWIIKNTWGADWGESGYIRLIRDTDHSCGVEKMASYPILA 324          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.664e-33
Identity = 78/191 (40.84%), Postives = 113/191 (59.16%), Query Frame = -1
Query:  277 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR--PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 843
            S TG++E  +    G  +SLSEQ+L+DC +   ++ C GGLPS A+  IK  GGL+TE+ Y Y G    C FS+E   V + DSV ++   ++E + A  L +  P+SVA     G +FY+ G+    +   +P  ++HAV+ VGYG    VP+W IKNSWG +WG+ GY+ +  G   CG+ T AS  VV
Sbjct:  299 SVTGNVEGQWFLNQGTLLSLSEQELLDCDKM--DKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAKVYINDSVELS---QNEQKLAAWLAKRGPISVAINAF-GMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 483          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.249e-33
Identity = 75/189 (39.68%), Postives = 111/189 (58.73%), Query Frame = -1
Query:  277 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 843
            S TG++E  +    G  +SLSEQ+L+DC +   ++ C GGLPS A+  IK  GGL+TE+ Y Y G    C FS++   V + DSV ++   E+++   +    P+SVA     G +FY+ G+    +   +P  ++HAV+ VGYG    +PYW IKNSWG +WG+ GY+ +  G   CG+ T AS  VV
Sbjct:  277 SVTGNVEGQWFLNRGTLLSLSEQELLDCDKV--DKACLGGLPSNAYAAIKNLGGLETEDDYGYQGHVQTCNFSAQMAKVYINDSVELSRN-ENKIAAWLAQKGPISVAINAF-GMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAIKNSWGSDWGEEGYYYLYRGSGACGVNTMASSAVV 461          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.162e-33
Identity = 83/195 (42.56%), Postives = 109/195 (55.90%), Query Frame = -1
Query:  274 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKME----MGKNMCGIATCASYPVVA 843
            S   ++E+      G+ ISLSEQ+LVDC  A  + GCNGG  + AF+YI  NGG+DT++ YPY+   G CK     V V +     +T   E  LQ AV   +PVSV  E     F+ Y SG+++   CG      NH VV VGYG + G  YW+++NSWG+NWG+ GY  ME        +CGIA   SYP  A
Sbjct:   29 SAVAAVESINKIRTGQLISLSEQELVDCDTA--SHGCNGGWMNNAFQYIITNGGIDTQQNYPYSAVQGSCKPYRLRV-VSINGFQRVTRNNESALQSAVAS-QPVSVTVEAAGAPFQHYSSGIFTGP-CGTAQ---NHGVVIVGYGTQSGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTKA 215          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.392e-32
Identity = 80/192 (41.67%), Postives = 114/192 (59.38%), Query Frame = -1
Query:  277 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR--PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 843
            STTG++E+ + +  GK +SLSEQQLVDC     + GCNGGLPS A+E I   GGL  E+ YPY  K+  C   ++ V V +  SVN+T   +DE + A  L     +SV    +   +FY+ G+        +   ++HAV+ VGYGV E   P+W++KNSWG  WG++GYF+M  G   CGI T A+  ++
Sbjct:  133 STTGNVESQWFRKTGKLLSLSEQQLVDCDGL--DDGCNGGLPSNAYESIIKMGGLMLEDNYPYDAKNEKCHLKTDGVAVYINSSVNLT---QDETELAAWLYHNSTISVGMNAL-LLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGENGYFRMYRGDGSCGINTVATSAMI 318          
The following BLAST results are available for this feature:
BLAST of CX671609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
CYSPL_SOLLC1.139e-3442.27Low-temperature-induced cysteine proteinase (Fragm... [more]
CYSP1_HORVU3.314e-3443.14Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
CPR1_ARATH3.314e-3443.59Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
CATS_RAT1.259e-3340.21Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
CATV_GVXN1.644e-3345.00Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CATLL_PHACE3.664e-3337.82Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CATF_HUMAN3.664e-3340.84Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CATF_MOUSE6.249e-3339.68Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
ERVB_TABDI8.162e-3342.56Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
CATL_SCHMA1.392e-3241.67Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B04_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B04-D8-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671609 ID=CX671609; Name=CX671609; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTTTTTTGCATTGACAAAATATATATAACATCGNTTGGTG
TCCTAGTCACAATGACTGTTTACATGGACATAGATCTCAGAATTTATTTT
GAACATCAAGCAGCCATGCATTGCTATTGTAGATTATATGGACATTAATC
TCCGAATTTATTTCGTACATAAAGCCAACCATTCTGCTATCATTCTTGAG
TGAAATAATATAAGTTTTATGAGCAAATGACTTGCTGATAGCCAGATCCA
ACTATTTCTTCAGGAGCAGACTAAGCCACAACTGGGTATGATGCACAAGT
TGCAATACCACACATGTTCTTCCCCATCTCCATCTTAAAGTAGCCATGAT
CGCCCCAGTTCTCTCCCCAAGAGTTCTTAATCAGCCAATATGGAACACCA
TCTTCAACTCCGTACCCAACAGCAACGACGGCATGGTTCACATCCATGGG
AGTATTTCCACATTTAGTGCTGCTGTAAACTCCACTCTTGTAAAATCGGA
ATCCATCTACTACTTCAAATGCCACACTCACAGGTCGAACAAGACCAACT
GCATGCTGTAATTCATCTTCAGCACCCAAGGTAATGTTGACTGAGTCCAG
GACTTGGACGCCAACATTTTCAGATGAGAATTTGCAGACACCATCTTTTC
CGGTGTAGGGATATGCTTCCTCAGTATCAAGGCCACCATTGTACTTGATG
TATTCAAAGGCTTGGGATGGCAACCCACCATTGCATCCCTGGTTGTTGAA
AGCTTGGGCACAGTCTACAAGCTGCTGTTCTGACAAAGAGATACCCTTTC
CAAAGGCCTGGTGGTAAGCAGCCTCAAGAGATCCAGTCGTGCT
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