CX671609

Overview
NameCX671609
Unique NameCX671609
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATM_MOUSE (Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.818e-32
Identity = 81/195 (41.54%), Postives = 105/195 (53.85%), Query Frame = -1
Query:  277 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV----EDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 843
            S TG++E    +  G+ I LS Q LVDC++   N GC  G    A  Y+  NGGL++E  YPY  KDG C++S EN    +          ED L +AV  + P+SVA +     F FYK G+Y    C +    V H+++ VGYG      DG  YWL+KNS G  WG+ GY K+   K N CGIAT A YP V
Sbjct:  142 SVTGAIEGQMFRKTGQLIPLSVQNLVDCSRPQGNWGCYLGNTYLALHYVMENGGLESEATYPYEEKDGSCRYSPENSTANI-TGFEFVPKNEDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCSSCV--VTHSMLLVGYGFTGRESDGRKYWLVKNSMGTQWGNKGYMKISRDKGNHCGIATYALYPRV 333          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.375e-32
Identity = 83/189 (43.92%), Postives = 105/189 (55.56%), Query Frame = -1
Query:  283 TTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSG-VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM-GKNMCGIATCASYP 840
            TT  LE   ++  GK  S SEQQLVDC  + N  GC GG PS + ++I+ N GL  E  YPY    G CK   +NV   V  S  +T G+E  LQ  +    PV+V  +     F+ YK G +YS TKC +  M  NH V AVGYG      YW+I+NSWG +WGD GYF +     NMCGI   ++YP
Sbjct:  120 TTAVLEGRVNKDLGKLYSFSEQQLVDCDASDN--GCEGGHPSNSLKFIQENNGLGLESDYPYKAVAGTCK-KVKNVAT-VTGSRRVTDGSETGLQTIIAENGPVAVGMDASRPSFQLYKKGTIYSDTKCRSRMM--NHCVTAVGYGSNSNGKYWIIRNSWGTSWGDAGYFLLARDSNNMCGIGRDSNYP 302          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.909e-32
Identity = 84/201 (41.79%), Postives = 110/201 (54.73%), Query Frame = -1
Query:  289 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFN-------NQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGF-RFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVP-------YWLIKNSWGENWGDHGYFKMEMGKNMCGIATCAS 843
            S TG+LE A   A GK +SLSEQQLVDC    +       + GCNGGL + AFEY    GGL  EE YPYTGKDG  CK     +   V    N ++ + DE Q A  LV+   +A  +  G+ + Y  GV     C      +NH V+ VGYG     P       YW+IKNSWGE WG++G++K+  G+N+CG+ +  S
Sbjct:  163 SATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKTCKLDKSKIVASVS---NFSVISIDEEQIAANLVKNGPLAVAINAGYMQTYIGGVSCPYICTRR---LNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVDSMVS 357          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.179e-31
Identity = 75/205 (36.59%), Postives = 119/205 (58.05%), Query Frame = -1
Query:  277 STTGSLEAAYHQAFGKGISLSEQQLVDC--------AQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR--PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGV-----PYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 843
            STTG++E  +  +  K +SLSEQ LVDC         +   ++GCNGGL   A+ YI  NGG+ TE +YPYT + G  C F+S N+G ++    N T+  ++E   A  +V   P+++A + V+ ++FY  GV+    C   P  ++H ++ VGY  ++ +     PYW++KNSWG +WG+ GY  +  GKN CG++   S  ++
Sbjct:  146 STTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKIS---NFTMIPKNETVMAGYIVSTGPLAIAADAVE-WQFYIGGVFD-IPCN--PNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSII 343          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CPP3_ENTHI (Cysteine proteinase 3 (Fragment) OS=Entamoeba histolytica GN=CPNP PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.179e-31
Identity = 75/173 (43.35%), Postives = 97/173 (56.07%), Query Frame = -1
Query:  283 ISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV--GLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 792
            + LSE+ LV C +   N GCNGGL S  ++YI  NG +  E  YPYTG D  CK ++     ++     +    E EL+ A+  GLV    V+ +     F+ YKSG YS TKC N    +NH V AVGYGV DG   W+++NSWG  WGD GY  M +  N CG+AT   YP
Sbjct:  135 LDLSEEHLVQCTRDNGNNGCNGGLGSNVYDYIIQNG-VAKESDYPYTGTDSTCK-TNVKAFAKITGYNKVPRNNEAELKAALSQGLV---DVSIDASSAKFQLYKSGAYSDTKCKNNFFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGDKGYINMVIEGNTCGVATDPLYP 302          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.539e-31
Identity = 72/180 (40.00%), Postives = 104/180 (57.78%), Query Frame = -1
Query:  304 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 843
            +T  SLE+ +     + I+LSEQQL+DC   + + GCNGGL   A+E +   GG+  E  YPY G DG C+       V+V          E++L+  + +V P+ VA +  D    Y+ G+     C N     NHAV+ VGYGVE+ VPYW++KN+WGE+WG+ GYF+++   N CGI
Sbjct:  141 ATLASLESQFAIKHNQLINLSEQQLIDCD--YVDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDGNCRVDVAKFVVKVKKCYRYIAVFEEKLKDLLRIVGPIPVAIDASDIVN-YRRGIMRY--CSN--YGFNHAVLLVGYGVENNVPYWILKNTWGEDWGEQGYFRVQQNINACGI 313          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.010e-31
Identity = 78/192 (40.62%), Postives = 106/192 (55.21%), Query Frame = -1
Query:  283 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYP 843
            ST  ++E       G   SLSEQ+L+DC   FN+ GCNGGL   AF+YI   GGL  E+ YPY  ++G+C+   E+V    +         +DE        +PVSVA E     F+FYK GV++  KCG    D++H V AVGYG   G  Y ++KNSWG  WG+ G+ +M+      + +CGI   ASYP
Sbjct:  165 STVAAVEGINQITTGNLSSLSEQELIDCDTTFNS-GCNGGLMDYAFQYIISTGGLHKEDDYPYLMEEGICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQFYKGGVFNG-KCGT---DLDHGVAAVGYGSSKGSDYVIVKNSWGPRWGEKGFIRMKRNTGKPEGLCGINKMASYP 351          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.010e-31
Identity = 65/177 (36.72%), Postives = 106/177 (59.89%), Query Frame = -1
Query:  304 GSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 834
            G++E+ Y     K I LSEQQL+DC +   + GCNGGL   AF+ +   GG++TE  YPY G + +C   +  + V++       +  E++L+  V    PV++A + +D    Y+ G+ +         D+NHAV+ +G+G+E+ VPYW+IKNSWGE+WG++G+ ++    N CG+
Sbjct:  187 GNIESQYAIRHNKLIDLSEQQLLDCDEV--DLGCNGGLMHLAFQELLLMGGVETEADYPYQGSEQMCTLDNRKIAVKLNSCFKYDIRDENKLKELVYTTGPVAIAVDAMDIIN-YRRGILNQCHI----YDLNHAVLLIGWGIENNVPYWIIKNSWGEDWGENGFLRVRRNVNACGL 356          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.429e-31
Identity = 72/173 (41.62%), Postives = 97/173 (56.07%), Query Frame = -1
Query:  283 ISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV--GLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 792
            + LSE+ +V C +   N GCNGGL S  ++YI    G+  E  YPYTG D  CK + ++   ++     +    E EL+ A+  GLV    V+ +     F+ YKSG Y+ TKC N    +NH V AVGYGV DG   W+++NSWG  WGD GY  M +  N CG+AT   YP
Sbjct:  142 LDLSEEHMVQCTRDNGNNGCNGGLGSNVYDYI-IEHGVAKESDYPYTGSDSTCKTNVKSFA-KITGYTKVPRNNEAELKAALSQGLV---DVSIDASSAKFQLYKSGAYTDTKCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGDKGYINMVIEGNTCGVATDPLYP 309          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.429e-31
Identity = 73/172 (42.44%), Postives = 96/172 (55.81%), Query Frame = -1
Query:  283 ISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAV--GLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 792
            + LSE+ +V C +   N GCNGGL S  + YI  NG +  E  YPYTG D  C+ S      ++     +    E EL+ A+  GLV  VS+    V  F+ YKSG Y+ T+C N    +NH V AVGYGV DG   W+++NSWG  WG+ GY  M +  N CG+AT   YP
Sbjct:  142 LDLSEEHMVQCTREDGNNGCNGGLGSNVYNYIMENG-IAKESDYPYTGSDSTCR-SDVKAFAKIKSYNRVARNNEVELKAAISQGLV-DVSIDASSVQ-FQLYKSGAYTDTQCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGEKGYINMVIEGNTCGVATDPLYP 309          
The following BLAST results are available for this feature:
BLAST of CX671609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
CATM_MOUSE1.818e-3241.54Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1[more]
ACP1_ENTHI2.375e-3243.92Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
RD19A_ARATH6.909e-3241.79Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
CYSP1_DICDI1.179e-3136.59Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CPP3_ENTHI1.179e-3143.35Cysteine proteinase 3 (Fragment) OS=Entamoeba hist... [more]
CATV_NPVHC1.539e-3140.00Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
XCP1_ARATH2.010e-3140.63Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
CATV_NPVHZ2.010e-3136.72Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CPP2_ENTHI3.429e-3141.62Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]
CPP1_ENTHI3.429e-3142.44Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_12B04_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B04-D8-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671609 ID=CX671609; Name=CX671609; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTTTTTTGCATTGACAAAATATATATAACATCGNTTGGTG
TCCTAGTCACAATGACTGTTTACATGGACATAGATCTCAGAATTTATTTT
GAACATCAAGCAGCCATGCATTGCTATTGTAGATTATATGGACATTAATC
TCCGAATTTATTTCGTACATAAAGCCAACCATTCTGCTATCATTCTTGAG
TGAAATAATATAAGTTTTATGAGCAAATGACTTGCTGATAGCCAGATCCA
ACTATTTCTTCAGGAGCAGACTAAGCCACAACTGGGTATGATGCACAAGT
TGCAATACCACACATGTTCTTCCCCATCTCCATCTTAAAGTAGCCATGAT
CGCCCCAGTTCTCTCCCCAAGAGTTCTTAATCAGCCAATATGGAACACCA
TCTTCAACTCCGTACCCAACAGCAACGACGGCATGGTTCACATCCATGGG
AGTATTTCCACATTTAGTGCTGCTGTAAACTCCACTCTTGTAAAATCGGA
ATCCATCTACTACTTCAAATGCCACACTCACAGGTCGAACAAGACCAACT
GCATGCTGTAATTCATCTTCAGCACCCAAGGTAATGTTGACTGAGTCCAG
GACTTGGACGCCAACATTTTCAGATGAGAATTTGCAGACACCATCTTTTC
CGGTGTAGGGATATGCTTCCTCAGTATCAAGGCCACCATTGTACTTGATG
TATTCAAAGGCTTGGGATGGCAACCCACCATTGCATCCCTGGTTGTTGAA
AGCTTGGGCACAGTCTACAAGCTGCTGTTCTGACAAAGAGATACCCTTTC
CAAAGGCCTGGTGGTAAGCAGCCTCAAGAGATCCAGTCGTGCT
back to top