CX671605

Overview
NameCX671605
Unique NameCX671605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.965e-47
Identity = 96/242 (39.67%), Postives = 132/242 (54.55%), Query Frame = 1
Query:    4 EEHPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFP------DSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQLQ 711
            E+ P    GWAARD++G LSPF++  R  GDEDV +K+L+CGICH+DL+ IKNEWG + +P+VPGHEI G V E                      C +C +C +  ENYC  ++ ++++   DG    GG+S+  V N+RY+VR P         PLD  APLLCAG+TVY P++  GL                                ISTSP K+ EA+E LGAD+FL S + +Q++
Sbjct:    2 EQQPKMVTGWAARDANGLLSPFSYPLRAKGDEDVVVKILFCGICHSDLSTIKNEWGNAKYPVVPGHEIVGVVAEVGSSVARFAAGDTVGVGYIASTCRACANCRDGFENYCAGLVPSFNAALPDGATVHGGFSELAVVNQRYVVRIPGGGGGASPAPLDRLAPLLCAGVTVYCPMRRLGLDRPGVHLGVAGLGGLGHLAVKFGKAFGVKVTVISTSPWKEAEAVERLGADAFLLSTNAEQMK 243          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.663e-46
Identity = 91/226 (40.27%), Postives = 124/226 (54.87%), Query Frame = 1
Query:   19 KAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRD 696
            K  GWAARD SG LSP+ ++ RETG EDV ++++ CGICHTDL   KN+ G S +PMVPGHE+ GEV E                      C  C  C  DLE YCPK I +Y+ +  +G  T GG++   V +++++V+ P+ M ++ AAPLLCAG+TVYSPL +FGL +                              IS+S  K+ EAL+ LGAD ++   D
Sbjct:    9 KTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSD 234          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 3.705e-46
Identity = 90/227 (39.65%), Postives = 130/227 (57.27%), Query Frame = 1
Query:   31 WAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQLQ 711
            WAARD SG LSP+ F+RRE   EDV L++ +CG+C+ D+   +N +  S++P+VPGHEIAG VTE                     +C  CE+C + LEN+C K ++TY+S+++DGT+T GGYS H++ ++RY  + P   PL  AAPLLCAGITVY+P+    + +                               STS SK+ EA+  LGAD+F+ S D +Q++
Sbjct:   13 WAARDPSGILSPYKFNRREVQSEDVSLRITHCGVCYADVIWTRNMFNDSIYPLVPGHEIAGVVTEVGADVKGFKVGDHVGVGVYVNSCQDCENCNSSLENHCSKCVVTYNSVDSDGTVTKGGYSSHILVHQRYCFKIPADYPLSKAAPLLCAGITVYTPMIRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFSTSESKREEAINLLGADNFVISSDENQME 239          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.402e-45
Identity = 94/228 (41.23%), Postives = 126/228 (55.26%), Query Frame = 1
Query:   28 GWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQLQ 711
            GWAARD SG LSP+ +S R TG ED+ +KVL CGICH+D+  IKN+ G S +PMVPGHE+ GEV E                      C SC  C +D E YC K I  Y+ + TDG  T GG++  +V  +R++V+ PD +  +  A ++CAG+TVYSPL  FGL +                              IS+S  K+TEALEHLGAD++L S D + ++
Sbjct:   12 GWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCGPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGQRFVVKIPDGLESEQDA-VMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMK 238          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.137e-45
Identity = 90/228 (39.47%), Postives = 127/228 (55.70%), Query Frame = 1
Query:   28 GWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQLQ 711
            G AA+D SG L+P+ ++ R TG +DV +K+ YCG+CH+DL  IKN+ G S +PMVPGHE+ GEV E                      C SC +C +++E YC K I +Y+ + TDG IT GG+++  V  ++++V+ P+ +  +  APLLCAG+TVYSPL +FGL                                IS+S  KK EALE LGAD++L S D   +Q
Sbjct:   13 GLAAKDPSGILTPYTYTLRNTGPDDVYIKIHYCGVCHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNVTRFKVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIWSYNDVYTDGKITQGGFAESTVVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFGLKTPGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSDKKKKEALEDLGADNYLVSSDTVGMQ 240          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.182e-40
Identity = 87/227 (38.33%), Postives = 120/227 (52.86%), Query Frame = 1
Query:   31 WAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQLQ 711
            WAARD SG LSP   +RR    +DV L + +CG+C+ D+   +N+ G S +P+VPGHEIAG VT+                     +C  CE C    E  C K + T++ I+ DG++T GGYS H+V +ERY  + P   PL++AAPLLCAGITVY+P+    + +                               STS SKK EAL  LGA++F+ S D DQ++
Sbjct:   14 WAARDPSGLLSPHTITRRSVTTDDVSLTITHCGVCYADVIWSRNQHGDSKYPLVPGHEIAGIVTKVGPNVQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAKGVFTFNGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGITVYAPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSISKKEEALNLLGAENFVISSDHDQMK 240          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.907e-34
Identity = 70/164 (42.68%), Postives = 97/164 (59.15%), Query Frame = 1
Query:   31 WAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYC-PKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYF 519
            +AA  ++  L+    +RR+ G  DV + + + GICH+D+  +K EWG   +P+VPGHEIAG VT                      +C  C SC   +E YC P    TY+SI  DG  T GGYS+ +V +E Y++R PD +PLD AAPLLCAGIT+YSPL+++
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHW 170          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.907e-34
Identity = 70/164 (42.68%), Postives = 97/164 (59.15%), Query Frame = 1
Query:   31 WAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYC-PKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYF 519
            +AA  ++  L+    +RR+ G  DV + + + GICH+D+  +K EWG   +P+VPGHEIAG VT                      +C  C SC   +E YC P    TY+SI  DG  T GGYS+ +V +E Y++R PD +PLD AAPLLCAGIT+YSPL+++
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHW 170          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.013e-33
Identity = 83/233 (35.62%), Postives = 117/233 (50.21%), Query Frame = 1
Query:   16 VKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGT-ITFGGYSDHMVANERYIVRFPDSM-PLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQL 708
            +KA G  A  +   L P + +RRE G  DV++++ YCG+CH+DL  +++EW  +++P VPGHEI G V                       +C  CE C + LENYC  M  TY+S   D    T GGYS  +V +ERY++R       L A APLLCAGIT YSPL+++  A                                +TS +K+ EA + LGAD  +NSR+ D++
Sbjct:    3 IKAVG--AYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHW-QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADEVVNSRNADEM 231          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.785e-32
Identity = 77/208 (37.02%), Postives = 108/208 (51.92%), Query Frame = 1
Query:   79 RRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPK-MILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDP 699
            RR     DV + + + GICH+D+ +  +EWG  +FPMVPGHEIAG VT                      +C  CE C N  E +C K ++ TY+S++ DG  T+GGYS  +V  +R++VR PD + +D A+PLLCAGIT YSPLK++ +                                +S S +KK EALE LGA+ +  + DP
Sbjct:   26 RRGLRPHDVLIDIKFSGICHSDIHSAFDEWGGGIFPMVPGHEIAGVVTAVGTKVTKLAVGDRVGVGCFVDSCGECEYCLNAEEQFCTKGVVQTYNSVDYDGNPTYGGYSQKIVVTDRFVVRIPDRLEMDVASPLLCAGITTYSPLKHWNVG-PGKKVAIVGVGGLGHLAIQFAHAMGAEVTVLSRSMNKKEEALE-LGANHYFATSDP 231          
The following BLAST results are available for this feature:
BLAST of CX671605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
CADH9_ORYSJ1.965e-4739.67Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]
CADH5_ARATH1.663e-4640.27Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]
CADH4_ORYSJ3.705e-4639.65Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza... [more]
CADH_EUCBO2.402e-4541.23Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH_MEDSA3.137e-4539.47Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH1_ARATH5.182e-4038.33Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
ADHC_MYCTU1.907e-3442.68NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO1.907e-3442.68NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
YAHK_ECOLI8.013e-3335.62Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADHA_BACSU1.785e-3237.02Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B01_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B01-D2-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671605 ID=CX671605; Name=CX671605; organism=Citrus sinensis; type=EST; length=711bp
GAAGAAGAACATCCAGTAAAGGCCTTCGGGTGGGCAGCCCGAGACAGCTC
CGGCCATCTCTCCCCATTCAACTTCTCCAGAAGGGAAACGGGTGATGAGG
ATGTGAGGCTGAAGGTATTGTATTGTGGGATCTGCCATACTGATCTCGCC
AACATCAAGAATGAATGGGGCTTCTCTCTCTTCCCTATGGTTCCTGGGCA
TGAAATTGCAGGGGAAGTGACAGAAGTTGGTAGCAAAGTAAGAAAGGTTA
AAGTGGGAGATAAAGTTGGAGTTGGATGCATGGTTGGTGCATGCCACAGC
TGCGAGAGCTGTGCCAATGACCTTGAAAATTACTGTCCGAAAATGATACT
CACCTACAGTTCCATTAACACTGACGGAACAATCACATTCGGAGGCTACT
CTGATCACATGGTTGCCAATGAGCGCTACATTGTTCGATTCCCTGATAGC
ATGCCCCTTGATGCTGCTGCTCCTCTGCTTTGCGCCGGGATTACCGTGTA
CAGTCCATTGAAATACTTTGGACTAGCAGAACAAGGAAAGCATGTAGGCA
TCGTTGGCCTTGGCGGGCTTGGTCATGTCGCTGTCAAATTTGCCAAGGCT
TTTGGGGCCAAAGTGACAGTAATTAGCACCTCTCCAAGCAAGAAGACTGA
AGCTCTTGAACATCTTGGCGCTGATTCATTTTTGAATAGCCGTGACCCTG
ACCAATTGCAG
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