CX671605

Overview
NameCX671605
Unique NameCX671605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: YJGB_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjgB OS=Escherichia coli (strain K12) GN=yjgB PE=3 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.584e-23
Identity = 65/229 (28.38%), Postives = 111/229 (48.47%), Query Frame = 1
Query:   31 WAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXA--CHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQLQ 711
            +AA+++ G L  + +   E   +DV ++V YCGICH+DL+ I NEWGFS +P+V GHE+ G V                       A  C  C++C +  +  C +      ++ T   +  GG+++ + A+ ++++  P+++ +++A PLLC GITV+ PL    +                                 S++P+K+ E L  +GAD  +NSRDP  L+
Sbjct:    7 YAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQ-----GAVPT--IMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHIT-ATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLA-MGADKVVNSRDPQALK 226          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: ADH6_YEAST (NADP-dependent alcohol dehydrogenase 6 OS=Saccharomyces cerevisiae GN=ADH6 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.407e-23
Identity = 51/140 (36.43%), Postives = 76/140 (54.29%), Query Frame = 1
Query:   94 DEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXX-ACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPL 510
            D D+ +K+  CG+C +D+      WG    P+V GHEI G+V +                      +C  C+ C ND E YC K + TYS    DG ++ GGY++++  +E ++V  P+++P   AAPLLC G+TVYSPL
Sbjct:   33 DHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPL 172          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: YL498_MIMIV (Probable zinc-type alcohol dehydrogenase-like protein L498 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L498 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.047e-20
Identity = 49/172 (28.49%), Postives = 82/172 (47.67%), Query Frame = 1
Query:   22 AFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTY--------SSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 513
            A G+   D    +    F R++  + +V +++ Y GICH+D   I  EW    FP++PGHE+ G V +                     +C  C+ C + +E +C                 I   G IT+GGYS+ ++  + ++ +FP ++ ++  APL+CAG T YSPL+
Sbjct:   71 ALGFGVTDVGKPVELLVFDRKKPTNNEVSIEIYYTGICHSDWHFIVGEWKAD-FPLIPGHELIGRVIDIGPNVDKYSIGDIVCVSPVIDSCGHCKMCTHHIEQHCMNGATEIYNQKTRLPGDIKPSGPITYGGYSNIVIIKQHFVYKFPKNLDIERCAPLMCAGATTYSPLR 241          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: ADH7_YEAST (NADP-dependent alcohol dehydrogenase 7 OS=Saccharomyces cerevisiae GN=ADH7 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.269e-18
Identity = 52/154 (33.77%), Postives = 75/154 (48.70%), Query Frame = 1
Query:   55 HLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXX-ACHSCESCANDLENYCPK-MILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPL 510
            H    +F  +  GD DV +++  CGIC +D       WG      + GHEI G V +                      AC  CE C +D E YC    +LT  +   DG I+ GG++ H+  +E + ++ P+++P   AAPLLC GITV+SPL
Sbjct:   20 HPKLVSFDPKPFGDHDVDVEIEACGICGSDFHIAVGNWGPVPENQILGHEIIGRVVKVGSKCHTGVKIGDRVGVGAQALACFECERCKSDNEQYCTNDHVLTMWTPYKDGYISQGGFASHVRLHEHFAIQIPENIPSPLAAPLLCGGITVFSPL 173          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: ADH1_ASPFN (Alcohol dehydrogenase 1 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=adh1 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.051e-17
Identity = 50/146 (34.25%), Postives = 70/146 (47.95%), Query Frame = 1
Query:   91 GDEDVRLKVLYCGICHTDLANIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGL 525
            G +++ +KV Y G+CHTDL  +K +W   +  P+V GHE AG V                       +C +CE C    E  CP   L  S    DGT     +  + +    +  + P ++PLDA AP+LCAGITVY  LK  G+
Sbjct:   30 GPDEILVKVRYSGVCHTDLHALKGDWPLPVKMPLVGGHEGAGVVVARGDLVTEFEIGDHAGLKWLNGSCLACEFCKQADEPLCPNASL--SGYTVDGT-----FQQYAIGKATHASKLPKNVPLDAVAPVLCAGITVYKGLKESGV 168          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: ADH_SCHPO (Alcohol dehydrogenase OS=Schizosaccharomyces pombe GN=adh1 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.051e-16
Identity = 47/144 (32.64%), Postives = 71/144 (49.31%), Query Frame = 1
Query:   85 ETGDEDVRLKVLYCGICHTDLANIKNEWGF-SLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 513
            E G ++V + + Y G+CHTDL  ++ +W   +  P++ GHE AG V +                     +C +CE C    E  CP + L  S    DGT     +  + +AN  +    P+S+PL+ AAP++CAGIT Y  LK
Sbjct:   30 EPGQDEVLVNIKYTGVCHTDLHALQGDWPLPAKMPLIGGHEGAGVVVKVGAGVTRLKIGDRVGVKWMNSSCGNCEYCMKAEETICPHIQL--SGYTVDGT-----FQHYCIANATHATIIPESVPLEVAAPIMCAGITCYRALK 166          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: ADH3_EMENI (Alcohol dehydrogenase 3 OS=Emericella nidulans GN=alcC PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.059e-16
Identity = 52/147 (35.37%), Postives = 70/147 (47.62%), Query Frame = 1
Query:   91 GDEDVRLKVLYCGICHTDLANIKNEWGF-SLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXX--ACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFG 522
            G +++ +K+ Y G+CHTDL  +K +W   S  P++ GHE AG V                         +C SCE C    E  CP   L  S    DGT     +  + +       + PD++PLDAAAP+LCAGITVY  LK  G
Sbjct:   30 GPDEILVKMRYSGVCHTDLHAMKGDWPLPSKMPLIGGHEGAGVVVAKGELVKDEDFKIGDRAGIKWLNGSCLSCEMCMQADEPLCPHASL--SGYTVDGT-----FQQYTIGKAALASKIPDNVPLDAAAPILCAGITVYKGLKESG 169          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: ADH2_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adh PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.901e-16
Identity = 46/149 (30.87%), Postives = 67/149 (44.97%), Query Frame = 1
Query:   79 RRETGDEDVRLKVLYCGICHTDLANIKNEWGFS-LFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFG 522
            R +  + +V +K+  CG+CHTDL     +W      P++PGHE  G V E                     AC  CE C    E  CP  +    S++       GGY+++  A   Y+ + PD++     AP+LCAG+T Y  LK  G
Sbjct:   20 RPKLEEGEVLVKIEACGVCHTDLHAAHGDWPIKPKLPLIPGHEGVGIVVEVAKGVKSIKVGDRVGIPWLYSACGECEYCLTGQETLCPHQLNGGYSVD-------GGYAEYCKAPADYVAKIPDNLDPVEVAPILCAGVTTYKALKVSG 161          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: ADH1_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adhT PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.382e-15
Identity = 42/142 (29.58%), Postives = 66/142 (46.48%), Query Frame = 1
Query:  100 DVRLKVLYCGICHTDLANIKNEWGFS-LFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFG 522
            +V +++  CG+CHTDL     +W      P++PGHE  G + E                     AC  C+ C +  E  C +      S++       GGY+++  A   Y+V+ PD++  + AAP+ CAG+T Y  LK  G
Sbjct:   27 EVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGVIEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCERQQNAGYSVD-------GGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG 161          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: ADH1_NEUCR (Alcohol dehydrogenase 1 OS=Neurospora crassa GN=adh-1 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.769e-15
Identity = 44/149 (29.53%), Postives = 70/149 (46.98%), Query Frame = 1
Query:   82 RETGDEDVRLKVLYCGICHTDLANIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGL 525
            ++ G ++V + V Y G+CHTDL  +K +W  +   P+V GHE AG V                       +C +C  C    E  CP  +L+  +++       G +  + +A   ++ + P    L+  AP+LCAGITVY  LK  G+
Sbjct:   30 QKPGPDEVLINVKYSGVCHTDLHAMKGDWPLATKMPLVGGHEGAGVVVAKGELVTEVEVGDHAGIKWLNGSCLACSFCMQADEPLCPHALLSGYTVD-------GSFQQYAIAKAAHVAKIPKGCDLETTAPVLCAGITVYKGLKESGV 171          
The following BLAST results are available for this feature:
BLAST of CX671605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
YJGB_ECOLI2.584e-2328.38Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADH6_YEAST4.407e-2336.43NADP-dependent alcohol dehydrogenase 6 OS=Saccharo... [more]
YL498_MIMIV2.047e-2028.49Probable zinc-type alcohol dehydrogenase-like prot... [more]
ADH7_YEAST3.269e-1833.77NADP-dependent alcohol dehydrogenase 7 OS=Saccharo... [more]
ADH1_ASPFN8.051e-1734.25Alcohol dehydrogenase 1 OS=Aspergillus flavus (str... [more]
ADH_SCHPO1.051e-1632.64Alcohol dehydrogenase OS=Schizosaccharomyces pombe... [more]
ADH3_EMENI3.059e-1635.37Alcohol dehydrogenase 3 OS=Emericella nidulans GN=... [more]
ADH2_BACST8.901e-1630.87Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH1_BACST3.382e-1529.58Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH1_NEUCR5.769e-1529.53Alcohol dehydrogenase 1 OS=Neurospora crassa GN=ad... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_12B01_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B01-D2-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671605 ID=CX671605; Name=CX671605; organism=Citrus sinensis; type=EST; length=711bp
GAAGAAGAACATCCAGTAAAGGCCTTCGGGTGGGCAGCCCGAGACAGCTC
CGGCCATCTCTCCCCATTCAACTTCTCCAGAAGGGAAACGGGTGATGAGG
ATGTGAGGCTGAAGGTATTGTATTGTGGGATCTGCCATACTGATCTCGCC
AACATCAAGAATGAATGGGGCTTCTCTCTCTTCCCTATGGTTCCTGGGCA
TGAAATTGCAGGGGAAGTGACAGAAGTTGGTAGCAAAGTAAGAAAGGTTA
AAGTGGGAGATAAAGTTGGAGTTGGATGCATGGTTGGTGCATGCCACAGC
TGCGAGAGCTGTGCCAATGACCTTGAAAATTACTGTCCGAAAATGATACT
CACCTACAGTTCCATTAACACTGACGGAACAATCACATTCGGAGGCTACT
CTGATCACATGGTTGCCAATGAGCGCTACATTGTTCGATTCCCTGATAGC
ATGCCCCTTGATGCTGCTGCTCCTCTGCTTTGCGCCGGGATTACCGTGTA
CAGTCCATTGAAATACTTTGGACTAGCAGAACAAGGAAAGCATGTAGGCA
TCGTTGGCCTTGGCGGGCTTGGTCATGTCGCTGTCAAATTTGCCAAGGCT
TTTGGGGCCAAAGTGACAGTAATTAGCACCTCTCCAAGCAAGAAGACTGA
AGCTCTTGAACATCTTGGCGCTGATTCATTTTTGAATAGCCGTGACCCTG
ACCAATTGCAG
back to top