CX671604

Overview
NameCX671604
Unique NameCX671604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length812
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671604 vs. ExPASy Swiss-Prot
Match: CADH_EUCGL (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.448e-41
Identity = 88/192 (45.83%), Postives = 120/192 (62.50%), Query Frame = -1
Query:  237 LCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 812
            +CAG+TVYSPL  FGL +                             VIS+S  K+TEALEHLGAD++L S D + ++ A  +LD I DT+  VHP+ P L LLK  GKL+L G  + PL+     +++GRK+++GS  G MKET+EM++F  +  +T+ IEVI MDYVNTA+ERL K DVRYRFV+D+  +
Sbjct:  162 MCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVGS 353          
BLAST of CX671604 vs. ExPASy Swiss-Prot
Match: CADH2_EUCGU (Probable cinnamyl alcohol dehydrogenase 2 OS=Eucalyptus gunnii GN=CAD2 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.448e-41
Identity = 88/192 (45.83%), Postives = 120/192 (62.50%), Query Frame = -1
Query:  237 LCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 812
            +CAG+TVYSPL  FGL +                             VIS+S  K+TEALEHLGAD++L S D + ++ A  +LD I DT+  VHP+ P L LLK  GKL+L G  + PL+     +++GRK+++GS  G MKET+EM++F  +  +T+ IEVI MDYVNTA+ERL K DVRYRFV+D+  +
Sbjct:  162 MCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVGS 353          
BLAST of CX671604 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.882e-41
Identity = 88/192 (45.83%), Postives = 118/192 (61.46%), Query Frame = -1
Query:  237 LCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 812
            LCAGITVYSP  +FG  +                             VIS+S  K+ EALEHLGAD +L S D D++Q A  +LD IIDTV   HP+   L LLK  GKL+L+G  + PL+     +++GRK+++GS  G MKET+EM+DF  +  +T+ IE++ MDY+NTAMERL K DV YRFV+D+A +
Sbjct:  162 LCAGITVYSPFNHFGFNQSGFRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQEAADSLDYIIDTVPVGHPLELYLSLLKIDGKLILIGVINTPLQFISPMVMLGRKSITGSFIGSMKETEEMLDFCKEKGVTSQIEIVKMDYINTAMERLEKNDVSYRFVVDVAGS 353          
BLAST of CX671604 vs. ExPASy Swiss-Prot
Match: CADH_PINRA (Probable cinnamyl alcohol dehydrogenase OS=Pinus radiata GN=CAD PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.235e-40
Identity = 84/192 (43.75%), Postives = 122/192 (63.54%), Query Frame = -1
Query:  237 LCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 812
            LCAG+TV+SP+K+F + E                             VIS+S  KK EA+E LGAD++L S+D +++  A  +LD I+DT+   HP+ P L LLK+ GKLV++G   +PL      LI+GR++++GS  G M+ETQE +DF A+  +++ IEV+ +DY+NTAMERL K DVRYRFV+D+A +
Sbjct:  162 LCAGVTVFSPMKHFAMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVTVISSSDKKKEEAMEVLGADAYLVSKDTEKMMEAAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERLEKNDVRYRFVVDVAGS 353          
BLAST of CX671604 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.919e-40
Identity = 85/192 (44.27%), Postives = 119/192 (61.98%), Query Frame = -1
Query:  237 LCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 812
            LCAG+TVYSPL +FGL +                             VIS+S  K+ EAL+HLGAD +L S D  ++Q A  +LD IIDTV   HP+ P L LLK  GKL+L+G  + PL+     +++GRK+++GS  G MKE  EM++F  + ++++ IE++ MDY+NTA ERL K DVRYRFV+D+A +
Sbjct:  162 LCAGVTVYSPLNHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRAEALDHLGADDYLVSSDAARMQEAADSLDYIIDTVPVFHPLEPYLSLLKIDGKLILMGVVNTPLQFVSPMVMLGRKSITGSFIGSMKELAEMLEFCKEKDLSSTIEIVKMDYINTAFERLEKNDVRYRFVVDVAGS 353          
BLAST of CX671604 vs. ExPASy Swiss-Prot
Match: CADH_LOLPR (Probable cinnamyl alcohol dehydrogenase OS=Lolium perenne PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.226e-38
Identity = 85/192 (44.27%), Postives = 116/192 (60.42%), Query Frame = -1
Query:  237 LCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 812
            LCAG+TVYSPLK+FGL                               VIS+S  K+ EA++ LGAD +L S D  Q+  AM +LD IIDTV   HP+ P L LLK  GKLVL+G   +PL      +++GRKT++GS  G ++ET+E++ F     +T+ IEV+ MDY+N A+ERL + DVRYRFV+D+A +
Sbjct:  163 LCAGVTVYSPLKHFGLMTPGLRGGILGLGGVGHMGVKVAKSMGHHVTVISSSDKKRAEAMDDLGADDYLVSSDEAQMAAAMDSLDYIIDTVPVKHPLEPYLALLKMDGKLVLMGVIGEPLSFVSPMVMLGRKTITGSFIGSIEETEEVLRFCVDKGLTSQIEVVKMDYLNQALERLERNDVRYRFVVDVAGS 354          
BLAST of CX671604 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.568e-38
Identity = 85/189 (44.97%), Postives = 116/189 (61.38%), Query Frame = -1
Query:  246 LCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDI 812
            LCAG+TVYSPL +FGL                               VIS+S  KK EALE LGAD++L S D   +Q A  +LD IIDTV   HP+ P L LLK  GKL+L+G  + PL+     +++GRK+++GS  G +KET+EM++F  +  +T+ IE+++MDY+N A ERL K DVRYRFV+D+
Sbjct:  163 LCAGVTVYSPLSHFGLKTPGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSDKKKKEALEDLGADNYLVSSDTVGMQEAADSLDYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFVTPMVMLGRKSITGSFVGSVKETEEMLEFWKEKGLTSMIEIVTMDYINKAFERLEKNDVRYRFVVDV 351          
BLAST of CX671604 vs. ExPASy Swiss-Prot
Match: CADH1_EUCGU (Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.660e-38
Identity = 85/192 (44.27%), Postives = 118/192 (61.46%), Query Frame = -1
Query:  237 LCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 812
            +CAG+TVY PL  FGL +                             VIS+S  K+TEALEHLGAD++L S D + ++ A  +LD + DT+  VHP+ P L LLK  GKL+L G  + PL+   IS ++  ++++GS  G MKET+EM++F  +  +T+ IEVI MDYVNTA+ERL K DVRYRFV+D+  +
Sbjct:  162 MCAGVTVYRPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYVFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQF--ISPMVMLESITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVGS 351          
BLAST of CX671604 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.771e-37
Identity = 83/192 (43.23%), Postives = 113/192 (58.85%), Query Frame = -1
Query:  237 LCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 812
            LCAG+TVYSPL +FGL                               VIS+S  KK EA+EHLGAD ++ S DP ++Q    +LD IIDTV   HP+ P L  LK  GKL+L+G  + PL+     +I+GRK +SGS  G +KET+E++ F  +  +T+ IE + +D +N A ERL K DVRYRFV+D+A +
Sbjct:  163 LCAGVTVYSPLSHFGLMASGLKGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKKEEAIEHLGADDYVVSSDPAEMQRLADSLDYIIDTVPVFHPLDPYLACLKLDGKLILMGVINTPLQFVTPLVILGRKVISGSFIGSIKETEEVLAFCKEKGLTSTIETVKIDELNIAFERLRKNDVRYRFVVDVAGS 354          
BLAST of CX671604 vs. ExPASy Swiss-Prot
Match: CADH_MAIZE (Probable cinnamyl alcohol dehydrogenase OS=Zea mays GN=CAD PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.152e-37
Identity = 83/192 (43.23%), Postives = 112/192 (58.33%), Query Frame = -1
Query:  237 LCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANT 812
            LCAG+TVYSPLK+FGL                               VIS+S  K+ EA++HLGAD++L S D   +  A  +LD IIDTV   HP+ P L LLK  GKLVL+G   +PL      +++GRK ++GS  G + ET E++ F     +T+ IEV+ M YVN A+ERL + DVRYRFV+D+A +
Sbjct:  162 LCAGVTVYSPLKHFGLTNPGLRGGILGLGGVGHMGVKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVSSDAAAMAAAADSLDYIIDTVPVHHPLEPYLALLKLDGKLVLLGVIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGS 353          
The following BLAST results are available for this feature:
BLAST of CX671604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
CADH_EUCGL3.448e-4145.83Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH2_EUCGU3.448e-4145.83Probable cinnamyl alcohol dehydrogenase 2 OS=Eucal... [more]
CADH2_TOBAC5.882e-4145.83Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH_PINRA2.235e-4043.75Probable cinnamyl alcohol dehydrogenase OS=Pinus r... [more]
CADH1_OCIBA2.919e-4044.27Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
CADH_LOLPR1.226e-3844.27Probable cinnamyl alcohol dehydrogenase OS=Lolium ... [more]
CADH_MEDSA3.568e-3844.97Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH1_EUCGU4.660e-3844.27Probable cinnamyl alcohol dehydrogenase 1 OS=Eucal... [more]
CADH4_ARATH1.771e-3743.23Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]
CADH_MAIZE5.152e-3743.23Probable cinnamyl alcohol dehydrogenase OS=Zea may... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B01_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B01-D2-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671604 ID=CX671604; Name=CX671604; organism=Citrus sinensis; type=EST; length=812bp
TTTTTTTTTTTTTTTTTATATGAACAATGTTTTATTTCATTAACATTTAT
AGTTTTTTTGGCAATCACGACATAATTAGGGTGATGTAACTGGAAATTAA
AAGTAATTTAAGCGCTAAAAGAGTGTAATGATCGAGGGAGCATTACATAT
AGCAAAGTGGATCATGGAACAAAGTTGTGAATTGAAGACACCAATCTGAT
TCTGATTCTGATTCTTCAAGGTTTGGTGGCGGCCAAGGTGTTTGCAATAT
CAATGACAAATCGATACCGAACATCAGCCTTGGCGAGCCGCTCCATTGCC
GTATTGACATAATCCATCGAAATAACCTCAATGTCAGCTGTTATATTGTG
TTTTGCTGCAAAATCAATCATCTCTTGCGTCTCTTTCATTCCCCCAGTGC
TGCTCCCTGACACCGTCTTCCTCCCCATAATTAAGGAAATCACAGGTAGC
TCGAGTGGCTTGTCCGGAGCACCAACCAGAACAAGCTTGCCCTGGGACTT
TAATAGACCGAGCAATGGCAAAATGGGGTGCACAGCGGACACCGTGTCAA
TAATACCATCCAATGTGCCCATGGCACCCTGCAATTGGTCAGGGTCACGG
CTATTCAAAAATGAATCAGCGCCAAGATGTTCAAGAGCTTCAGTCTTCTT
GCTTGGAGAGGTGCTAATTACTGTCACTTTGGCCCCAAAAGCCTTGGCAA
ATTTGACAGCGACATGACCAAGCCCGCCAAGGCCAACGATGCCTACATGC
TTTCCTTGTTCTGCTAGTCCAAAGTATTTCAATGGACTGTACACGGTAAT
CCCGGCGCAAAG
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