EG358274

Overview
NameEG358274
Unique NameEG358274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358274 vs. ExPASy Swiss-Prot
Match: 2NPD_STAA2 (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain JH1) GN=SaurJH1_0937 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.861e-19
Identity = 53/137 (38.69%), Postives = 83/137 (60.58%), Query Frame = 3
Query:  276 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYA 659
            +I  I+ ++V V   ++G  +E ++     A +K++    S DEA     AG+DAI+ QG EAGGH          +   G ISL+P +VD++    IP+IAAGGI+D RG +A++ LGA+G+ +GT F+ S++S A
Sbjct:  117 HIDTIIKKQVPVCCFTFGIPNESIIERLKEANIKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNA 250          
BLAST of EG358274 vs. ExPASy Swiss-Prot
Match: 2NPD_STAAW (Probable 2-nitropropane dioxygenase OS=Staphylococcus aureus (strain MW2) GN=MW0803 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.654e-19
Identity = 53/137 (38.69%), Postives = 82/137 (59.85%), Query Frame = 3
Query:  276 NIKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH---------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYA 659
            +I   + ++V V   ++G  SE ++     A +K++    S DEA     AG+DAI+ QG EAGGH          +   G ISL+P +VD++    IP+IAAGGI+D RG +A++ LGA+G+ +GT F+ S++S A
Sbjct:  117 HIDTTIKKQVPVCCFTFGIPSESIIKRLKEANIKLIGTATSVDEAIANEKAGMDAIVAQGSEAGGHRGSFLKPKNQLPMVGTISLVPQIVDVVS---IPVIAAGGIMDGRGVLASIVLGAEGVQMGTAFLTSQDSNA 250          
BLAST of EG358274 vs. ExPASy Swiss-Prot
Match: 2NPD_BACSU (Probable 2-nitropropane dioxygenase OS=Bacillus subtilis GN=yrpB PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.885e-17
Identity = 70/238 (29.41%), Postives = 105/238 (44.12%), Query Frame = 3
Query:   78 IVQAPLGPDISGPEXXXXXXXXXXXXXXRAPDWEAPDYLRDLIRKTRSLTERPFGVGVV----LAFPHNENIK------------------------------AILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH------VIGQD--GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAHP 665
            I+QAP+   I+ P                A  +  PD L   I++   LT+ PF + V     L  P  + IK                               IL  KV     ++    E+ V E  +AG  ++    + +EA      G+D +++QG EAGGH        G+   GL++L+P   D +    +P+IAAGG++D RG  AAL+LGAQG+ +G+ F+   ES AHP
Sbjct:   14 IIQAPMAGGITKPRLASAVSNQGALGSL-ASGYLTPDLLEQQIKEIFELTDAPFQINVFVPLGLEMPPKDQIKKWKENIPLANQVNQFTSVQEEWDDFYQKIDLILKYKVKACSFTFDLPPEDAVKELKTAGCCLIGTASTVEEALLMEERGMDIVVLQGSEAGGHRGAFLPSKGESAVGLMALIPQAADAL---SVPVIAAGGMIDHRGVKAALTLGAQGVQIGSAFLICHESNAHP 247          
BLAST of EG358274 vs. ExPASy Swiss-Prot
Match: 2NPD_STAHJ (Probable 2-nitropropane dioxygenase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH2032 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.644e-16
Identity = 49/138 (35.51%), Postives = 82/138 (59.42%), Query Frame = 3
Query:  279 IKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH------VIGQD----GLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYAH 662
            I+ ++  +V V   ++G  S+E++ +   A + ++    + DEA    +AG+D ++ QG EAGGH         Q     G +SL+P +VD +    IP++AAGG++D RG +A+  LGAQG+ +GT F+ +EES A+
Sbjct:  118 IQTVIKYRVPVCCFTFGIPSKEIIEQLKGAKITLIGTATTVDEAIANEHAGMDIVVAQGSEAGGHRGSFLTTNNQREPLIGTMSLIPQIVDHVS---IPVVAAGGVMDGRGILASQILGAQGVQMGTAFLTTEESGAN 252          
BLAST of EG358274 vs. ExPASy Swiss-Prot
Match: 2NPD_STAS1 (Probable 2-nitropropane dioxygenase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1854 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.765e-15
Identity = 48/137 (35.04%), Postives = 80/137 (58.39%), Query Frame = 3
Query:  279 IKAILSEKVAVLQVSWGEYSEELVLEAHSAGVKVVPQVGSFDEARKAVNAGVDAIIVQGREAGGH----------VIGQDGLISLLPMVVDLIGDRDIPIIAAGGIVDARGYVAALSLGAQGICLGTRFVASEESYA 659
            I  ++ + V  +  ++G   + ++ +     +K++    S +EA    +AG+D +I QG EAGGH          +    G +SL+P +VD I   +IP++AAGGI+D RG VA++ LGA+G+ +GT F+ S+ES A
Sbjct:  118 IDLVIEKGVPAVSFTFGIPEQTVIEKLKERHIKLIGTATSVEEAIANESAGMDMVIAQGSEAGGHRGAFSETASQLTPLIGTMSLVPQMVDQI---NIPVVAAGGIMDGRGLVASMVLGAEGVQMGTAFLTSDESGA 251          
The following BLAST results are available for this feature:
BLAST of EG358274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
2NPD_STAA25.861e-1938.69Probable 2-nitropropane dioxygenase OS=Staphylococ... [more]
2NPD_STAAW7.654e-1938.69Probable 2-nitropropane dioxygenase OS=Staphylococ... [more]
2NPD_BACSU1.885e-1729.41Probable 2-nitropropane dioxygenase OS=Bacillus su... [more]
2NPD_STAHJ4.644e-1635.51Probable 2-nitropropane dioxygenase OS=Staphylococ... [more]
2NPD_STAS11.765e-1535.04Probable 2-nitropropane dioxygenase OS=Staphylococ... [more]

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Properties
Property NameValue
Genbank description4c10 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl004c10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358274 ID=EG358274; Name=EG358274; organism=Citrus sinensis; type=EST; length=668bp
ACGCGGGGACAGTTCATTTGTATACTTTGAAGTTTACTCTAATGGGTTGG
AGAGGAATGCTGGGTTTCGAGTATGGGATTGTTCAGGCACCATTGGGACC
TGATATTTCAGGCCCGGAGCTTGTAGCTGCTGTTGCTAATGCCGGTGGTC
TTGGTCTTCTTAGAGCCCCCGATTGGGAAGCACCAGATTACTTGAGGGAT
CTGATAAGGAAGACAAGATCATTAACAGAGCGACCATTTGGGGTTGGTGT
GGTTCTAGCATTTCCCCACAACGAAAATATAAAGGCTATACTTAGTGAAA
AAGTAGCAGTTTTGCAAGTTTCCTGGGGTGAATATTCAGAGGAGCTCGTT
CTTGAAGCTCATAGTGCTGGAGTCAAAGTTGTCCCCCAAGTTGGGAGTTT
TGACGAAGCAAGAAAAGCAGTTAACGCAGGTGTAGATGCAATTATAGTCC
AAGGACGTGAAGCTGGGGGCCATGTAATTGGACAGGATGGTTTGATTTCC
TTATTGCCAATGGTGGTTGATCTTATCGGGGATCGAGATATTCCAATAAT
TGCTGCAGGTGGTATTGTGGATGCACGTGGTTATGTTGCAGCCCTGTCTC
TTGGTGCTCAAGGCATCTGCTTAGGCACAAGGTTTGTGGCAAGTGAGGAA
AGCTATGCGCATCCTGAG
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