CX671601

Overview
NameCX671601
Unique NameCX671601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_PSEAB (NADH pyrophosphatase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=nudC PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.548e-18
Identity = 55/141 (39.01%), Postives = 80/141 (56.74%), Query Frame = 1
Query:  358 LCFVELRTLMVATDWADQRAMADLAIAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            + +  LR  M+  D+ DQ  M      G+A  +  W   +RFCG+CG +   ++  ++ QC    C    YPR+ P +I+LV     D VLL+R  RFVP ++S +AGF+E GES+E+ V RE  EE G+EV  + Y  SQ
Sbjct:   78 MAWAPLRQFMLHGDF-DQFCML-----GYASQIGIWARHNRFCGNCGTRMQAQDHERVMQCPQ--CGLHQYPRLSPSMIVLVT--RGDEVLLARSPRFVPGVYSTLAGFVEAGESVEQCVVREVREEVGVEVANLEYIGSQ 208          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_PSEA8 (NADH pyrophosphatase OS=Pseudomonas aeruginosa (strain LESB58) GN=nudC PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.548e-18
Identity = 55/141 (39.01%), Postives = 80/141 (56.74%), Query Frame = 1
Query:  358 LCFVELRTLMVATDWADQRAMADLAIAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            + +  LR  M+  D+ DQ  M      G+A  +  W   +RFCG+CG +   ++  ++ QC    C    YPR+ P +I+LV     D VLL+R  RFVP ++S +AGF+E GES+E+ V RE  EE G+EV  + Y  SQ
Sbjct:   78 MAWAPLRQFMLHGDF-DQFCML-----GYASQIGIWARHNRFCGNCGTRMQAQDHERVMQCPQ--CGLHQYPRLSPSMIVLVT--RGDEVLLARSPRFVPGVYSTLAGFVEAGESVEQCVVREVREEVGVEVANLEYIGSQ 208          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_PSESM (NADH pyrophosphatase OS=Pseudomonas syringae pv. tomato GN=nudC PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.248e-17
Identity = 51/136 (37.50%), Postives = 73/136 (53.68%), Query Frame = 1
Query:  373 LRTLMVATDWADQRAMADLAIAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            LR  M+  D+A  + +      G+A  +  W    RFCG CG  T+     +   C + +   R+YPR+ P +I+LV     D VLL+R  RFV  M+S +AGF+EPGES E+ V RE  EE  + +  + Y  SQ
Sbjct:   83 LRQFMLEGDFAVFQML------GYAAQVATWAREHRFCGACGRATVQIAGERAMYCEHDNL--RLYPRISPSMIVLVT--RGDEVLLARSPRFVSGMYSALAGFVEPGESAEDCVHREVMEEVQVRIKNLKYMGSQ 208          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_PSEA7 (NADH pyrophosphatase OS=Pseudomonas aeruginosa (strain PA7) GN=nudC PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.248e-17
Identity = 55/141 (39.01%), Postives = 78/141 (55.32%), Query Frame = 1
Query:  358 LCFVELRTLMVATDWADQRAMADLAIAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            + +  LR  M+  D+ DQ  M      G+A  +  W   +RFCG+CG +       ++ QC    C    YPR+ P +I+LV     D VLL+R  RFVP ++S +AGF+E GES+E+ V RE  EE G+EV  + Y  SQ
Sbjct:   78 MAWTPLRQFMLHGDF-DQFCML-----GYASQIGIWARHNRFCGNCGTRMQALGHERVMQCPQ--CNLHQYPRLSPSMIVLVT--RGDEVLLARSPRFVPGVYSTLAGFVEAGESVEQCVVREVREEVGVEVANLEYIGSQ 208          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_PSEU2 (NADH pyrophosphatase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=nudC PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.541e-17
Identity = 50/136 (36.76%), Postives = 73/136 (53.68%), Query Frame = 1
Query:  373 LRTLMVATDWADQRAMADLAIAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            LR  M+  D+A  + +      G+A  +  W    RFCG CG  T+     +   C + +   R+YPR+ P +I+LV     D +LL+R  RFV  M+S +AGF+EPGES E+ V RE  EE  + +  + Y  SQ
Sbjct:   83 LRQFMLEGDFAVFQML------GYAAQVSTWAREHRFCGACGRATVQIRGERAMFCEHDNL--RLYPRISPSMIVLVT--RGDEILLARSPRFVTGMYSALAGFVEPGESAEDCVHREVMEEVQVRIKNLRYRGSQ 208          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUD13_MOUSE (Nucleoside diphosphate-linked moiety X motif 13 OS=Mus musculus GN=Nudt13 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 5.541e-17
Identity = 56/139 (40.29%), Postives = 76/139 (54.68%), Query Frame = 1
Query:  364 FVELRTLMVATDWADQRAMADLAIAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            F++LR  +       Q    D ++   A+ALL WH+  +FC   G+ T    AG  + C   S K   YP++ PVVI LV D    R LL+RQS F   ++S +AGF + GES+EE V RE  EE G+EV  + Y  SQ
Sbjct:  135 FIKLRQALF------QLNSVDSSLLFTAQALLRWHDGHQFCSKSGQPTQKNVAGSKRVCP--SSKIIYYPQMAPVVITLVSD--GARCLLARQSSFPKGLYSALAGFCDIGESVEETVHREVAEEVGLEVENIQYSASQ 263          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_PSE14 (NADH pyrophosphatase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=nudC PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.236e-17
Identity = 50/136 (36.76%), Postives = 73/136 (53.68%), Query Frame = 1
Query:  373 LRTLMVATDWADQRAMADLAIAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            LR  M+  D+A  + +      G+A  +  W    RFCG CG  T+     +   C + +   R+YPR+ P +I+LV     D +LL+R  RFV  M+S +AGF+EPGES E+ V RE  EE  + +  + Y  SQ
Sbjct:   83 LRQFMLEGDFAVFQML------GYAAQVSTWAREHRFCGACGRATVQIRGERAMFCEHDNL--RLYPRISPSMIVLVT--RGDEILLARSPRFVTGMYSALAGFVEPGESAEDCVHREVMEEVQVRIKNLKYMGSQ 208          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_SHISS (NADH pyrophosphatase OS=Shigella sonnei (strain Ss046) GN=nudC PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.750e-16
Identity = 43/116 (37.07%), Postives = 73/116 (62.93%), Query Frame = 1
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   ++CG+CG +  P +      CS+  C++R YP++ P +I+ +  R +D +LL++ +R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_SHIF8 (NADH pyrophosphatase OS=Shigella flexneri serotype 5b (strain 8401) GN=nudC PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.750e-16
Identity = 43/116 (37.07%), Postives = 73/116 (62.93%), Query Frame = 1
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   ++CG+CG +  P +      CS+  C++R YP++ P +I+ +  R +D +LL++ +R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_SHIDS (NADH pyrophosphatase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=nudC PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.750e-16
Identity = 43/116 (37.07%), Postives = 73/116 (62.93%), Query Frame = 1
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   ++CG+CG +  P +      CS+  C++R YP++ P +I+ +  R +D +LL++ +R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192          
The following BLAST results are available for this feature:
BLAST of CX671601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
NUDC_PSEAB8.548e-1839.01NADH pyrophosphatase OS=Pseudomonas aeruginosa (st... [more]
NUDC_PSEA88.548e-1839.01NADH pyrophosphatase OS=Pseudomonas aeruginosa (st... [more]
NUDC_PSESM3.248e-1737.50NADH pyrophosphatase OS=Pseudomonas syringae pv. t... [more]
NUDC_PSEA73.248e-1739.01NADH pyrophosphatase OS=Pseudomonas aeruginosa (st... [more]
NUDC_PSEU25.541e-1736.76NADH pyrophosphatase OS=Pseudomonas syringae pv. s... [more]
NUD13_MOUSE5.541e-1740.29Nucleoside diphosphate-linked moiety X motif 13 OS... [more]
NUDC_PSE147.236e-1736.76NADH pyrophosphatase OS=Pseudomonas syringae pv. p... [more]
NUDC_SHISS2.750e-1637.07NADH pyrophosphatase OS=Shigella sonnei (strain Ss... [more]
NUDC_SHIF82.750e-1637.07NADH pyrophosphatase OS=Shigella flexneri serotype... [more]
NUDC_SHIDS2.750e-1637.07NADH pyrophosphatase OS=Shigella dysenteriae serot... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12A11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12A11-B22-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671601 ID=CX671601; Name=CX671601; organism=Citrus sinensis; type=EST; length=780bp
CCAACTTCGGCTCTTGAATCACTCAAAACAAGACTTTTAGACAATACCCT
TCACTGCCAACCACAAAAACACCATTCATCATTATCATCATCATCTTCTT
CTTCTCCTGATTTCAAGGTCTTGCCTTTCAGAAAGGGCAGGCCTTTGACT
TATTCTGGCCCTGGTGAGACGGCGCCGGTTTGGCATCTGGGTTGGATCAG
TTTGGGTGATTGCAAGATTTTCTTGGCGAATTCTGGGATTGAGTTGAAGG
AAGAGGCTTTGGTTTATCTGGGTTCTCGGTCTGCGGATGATGTGGTTTAT
TGGGCAATTGATGTGTCTGACGGGGATAGCTTGGCTTCTGAATTCGGTAG
TAAACAATTATGCTTTGTGGAGCTGAGGACGCTTATGGTGGCTACTGATT
GGGCTGATCAGCGGGCTATGGCTGATTTGGCTATTGCCGGTCATGCCAGG
GCATTACTAGAGTGGCATAATGTATCACGGTTTTGTGGACATTGTGGGGA
AAAAACAATCCCTAAGGAAGCTGGGAAACTGAAGCAGTGCTCAAATGCAT
CGTGCAAAAAGAGGATATACCCTCGTGTTGATCCAGTGGTCATTATGTTG
GTCATTGACAGAGAGAATGATCGTGTACTTTTAAGCAGACAATCAAGATT
TGTCCCACGAATGTGGAGCTGCATAGCTGGTTTTATAGAGCCTGGAGAAA
GCTTAGAAGAAGCAGTGAGGAGAGAAACATGGGAAGAGACTGGCATTGAA
GTTGGGGAAGTTGTCTATCATACTTCTCAA
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