CX671601

Overview
NameCX671601
Unique NameCX671601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_SHIBS (NADH pyrophosphatase OS=Shigella boydii serotype 4 (strain Sb227) GN=nudC PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.750e-16
Identity = 43/116 (37.07%), Postives = 73/116 (62.93%), Query Frame = 1 
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   ++CG+CG +  P +      CS+  C++R YP++ P +I+ +  R +D +LL++ +R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192
[Close]
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_SHIB3 (NADH pyrophosphatase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=nudC PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.750e-16
Identity = 43/116 (37.07%), Postives = 73/116 (62.93%), Query Frame = 1 
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   ++CG+CG +  P +      CS+  C++R YP++ P +I+ +  R +D +LL++ +R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192
[Close]
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_PHOPR (NADH pyrophosphatase OS=Photobacterium profundum GN=nudC PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.750e-16
Identity = 61/204 (29.90%), Postives = 101/204 (49.51%), Query Frame = 1 
Query:  193 WISLGDCKIFLANSGIELKEEALVYLGSRSADDVVYWAIDVSDGDSLASEFGSKQLCFVELRTLMVATDWADQRAMADLA-----IAGHARALLEWHNVSRFCGHCGEKTIPKE---AGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            W  + D K++L ++ I L E++ +   + SA               +  E+    + ++E    + + D+  QR +  +      +AG A  L    +   FC  CG   +  +   A   +QCSNA      YPRV P +I+ V  R+ D++LL++  R    +++ IAGF+E GE+LE+ V RE  EETGI+V  + Y +SQ
Sbjct:   15 WCVVNDRKLYLLDNAIPLLEKSELTFNTDSA--------------RVIGEYLDHPVYWLEANNCLHSDDFYTQRELLGIDQALFDLAGRATQLSHMLHTQSFCSVCGGAAVLADDQFAMVCQQCSNAQ-----YPRVSPCIIVAV--RKEDQILLAQHPRHKTGIYTVIAGFVEAGETLEQCVAREVEEETGIQVKNIRYFSSQ 197
[Close]
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_ESCF3 (NADH pyrophosphatase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=nudC PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.750e-16
Identity = 43/116 (37.07%), Postives = 73/116 (62.93%), Query Frame = 1 
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   ++CG+CG +  P +      CS+  C++R YP++ P +I+ +  R +D +LL++ +R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192
[Close]
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_ECOUT (NADH pyrophosphatase OS=Escherichia coli (strain UTI89 / UPEC) GN=nudC PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.750e-16
Identity = 43/116 (37.07%), Postives = 73/116 (62.93%), Query Frame = 1 
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   ++CG+CG +  P +      CS+  C++R YP++ P +I+ +  R +D +LL++ +R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192
[Close]
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_ECOSM (NADH pyrophosphatase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=nudC PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.750e-16
Identity = 43/116 (37.07%), Postives = 73/116 (62.93%), Query Frame = 1 
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   ++CG+CG +  P +      CS+  C++R YP++ P +I+ +  R +D +LL++ +R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192
[Close]
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_ECOSE (NADH pyrophosphatase OS=Escherichia coli (strain SE11) GN=nudC PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.750e-16
Identity = 43/116 (37.07%), Postives = 73/116 (62.93%), Query Frame = 1 
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   ++CG+CG +  P +      CS+  C++R YP++ P +I+ +  R +D +LL++ +R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192
[Close]
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_ECOLU (NADH pyrophosphatase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=nudC PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.750e-16
Identity = 43/116 (37.07%), Postives = 73/116 (62.93%), Query Frame = 1 
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   ++CG+CG +  P +      CS+  C++R YP++ P +I+ +  R +D +LL++ +R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192
[Close]
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_ECOLI (NADH pyrophosphatase OS=Escherichia coli (strain K12) GN=nudC PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.750e-16
Identity = 43/116 (37.07%), Postives = 73/116 (62.93%), Query Frame = 1 
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   ++CG+CG +  P +      CS+  C++R YP++ P +I+ +  R +D +LL++ +R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192
[Close]
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_ECOLC (NADH pyrophosphatase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=nudC PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.750e-16
Identity = 43/116 (37.07%), Postives = 73/116 (62.93%), Query Frame = 1 
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   ++CG+CG +  P +      CS+  C++R YP++ P +I+ +  R +D +LL++ +R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192
The following BLAST results are available for this feature:
BLAST of CX671601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
NUDC_SHIBS2.750e-1637.07NADH pyrophosphatase OS=Shigella boydii serotype 4... [more]
NUDC_SHIB32.750e-1637.07NADH pyrophosphatase OS=Shigella boydii serotype 1... [more]
NUDC_PHOPR2.750e-1629.90NADH pyrophosphatase OS=Photobacterium profundum G... [more]
NUDC_ESCF32.750e-1637.07NADH pyrophosphatase OS=Escherichia fergusonii (st... [more]
NUDC_ECOUT2.750e-1637.07NADH pyrophosphatase OS=Escherichia coli (strain U... [more]
NUDC_ECOSM2.750e-1637.07NADH pyrophosphatase OS=Escherichia coli (strain S... [more]
NUDC_ECOSE2.750e-1637.07NADH pyrophosphatase OS=Escherichia coli (strain S... [more]
NUDC_ECOLU2.750e-1637.07NADH pyrophosphatase OS=Escherichia coli O17:K52:H... [more]
NUDC_ECOLI2.750e-1637.07NADH pyrophosphatase OS=Escherichia coli (strain K... [more]
NUDC_ECOLC2.750e-1637.07NADH pyrophosphatase OS=Escherichia coli (strain A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12A11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12A11-B22-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671601 ID=CX671601; Name=CX671601; organism=Citrus sinensis; type=EST; length=780bp
CCAACTTCGGCTCTTGAATCACTCAAAACAAGACTTTTAGACAATACCCT
TCACTGCCAACCACAAAAACACCATTCATCATTATCATCATCATCTTCTT
CTTCTCCTGATTTCAAGGTCTTGCCTTTCAGAAAGGGCAGGCCTTTGACT
TATTCTGGCCCTGGTGAGACGGCGCCGGTTTGGCATCTGGGTTGGATCAG
TTTGGGTGATTGCAAGATTTTCTTGGCGAATTCTGGGATTGAGTTGAAGG
AAGAGGCTTTGGTTTATCTGGGTTCTCGGTCTGCGGATGATGTGGTTTAT
TGGGCAATTGATGTGTCTGACGGGGATAGCTTGGCTTCTGAATTCGGTAG
TAAACAATTATGCTTTGTGGAGCTGAGGACGCTTATGGTGGCTACTGATT
GGGCTGATCAGCGGGCTATGGCTGATTTGGCTATTGCCGGTCATGCCAGG
GCATTACTAGAGTGGCATAATGTATCACGGTTTTGTGGACATTGTGGGGA
AAAAACAATCCCTAAGGAAGCTGGGAAACTGAAGCAGTGCTCAAATGCAT
CGTGCAAAAAGAGGATATACCCTCGTGTTGATCCAGTGGTCATTATGTTG
GTCATTGACAGAGAGAATGATCGTGTACTTTTAAGCAGACAATCAAGATT
TGTCCCACGAATGTGGAGCTGCATAGCTGGTTTTATAGAGCCTGGAGAAA
GCTTAGAAGAAGCAGTGAGGAGAGAAACATGGGAAGAGACTGGCATTGAA
GTTGGGGAAGTTGTCTATCATACTTCTCAA
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