CX671601

Overview
NameCX671601
Unique NameCX671601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_PSEPF (NADH pyrophosphatase OS=Pseudomonas fluorescens (strain Pf0-1) GN=nudC PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16
Identity = 49/118 (41.53%), Postives = 66/118 (55.93%), Query Frame = 1 
Query:  433 IAGHARALLEWHNVSRFCGHCGEKT--IPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            + G+A  +  W    RFCG+CG+    +P+E     Q     C  R YPR+ P +I+LV     D VLL+R  RFV  ++S +AGF EPGES E+ + RE  EE  IEV  + Y  SQ
Sbjct:   95 VLGYAAQIGTWAREHRFCGNCGQAMTQVPRERAMYCQ----PCDLRSYPRISPSMIVLVT--RGDEVLLARSPRFVTGVYSTLAGFAEPGESAEDCLIREVREEVQIEVKNIQYMGSQ 206
[Close]
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_SALTY (NADH pyrophosphatase OS=Salmonella typhimurium GN=nudC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 1 
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   +FCG+CG    P +      CS+  C++R YP++ P +I+ +  R  D +LL++  R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKFCGYCGHPMHPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RREDSILLAQHVRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192
[Close]
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_SALSV (NADH pyrophosphatase OS=Salmonella schwarzengrund (strain CVM19633) GN=nudC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 1 
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   +FCG+CG    P +      CS+  C++R YP++ P +I+ +  R  D +LL++  R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKFCGYCGHPMHPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RREDSILLAQHVRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192
[Close]
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_SALPK (NADH pyrophosphatase OS=Salmonella paratyphi A (strain AKU_12601) GN=nudC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 1 
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   +FCG+CG    P +      CS+  C++R YP++ P +I+ +  R  D +LL++  R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKFCGYCGHPMHPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RREDSILLAQHVRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192
[Close]
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_SALPC (NADH pyrophosphatase OS=Salmonella paratyphi C (strain RKS4594) GN=nudC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 1 
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   +FCG+CG    P +      CS+  C++R YP++ P +I+ +  R  D +LL++  R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKFCGYCGHPMHPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RREDSILLAQHVRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192
[Close]
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_SALPB (NADH pyrophosphatase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=nudC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 1 
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   +FCG+CG    P +      CS+  C++R YP++ P +I+ +  R  D +LL++  R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKFCGYCGHPMHPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RREDSILLAQHVRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192
[Close]
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_SALPA (NADH pyrophosphatase OS=Salmonella paratyphi A GN=nudC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 1 
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   +FCG+CG    P +      CS+  C++R YP++ P +I+ +  R  D +LL++  R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKFCGYCGHPMHPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RREDSILLAQHVRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192
[Close]
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_SALNS (NADH pyrophosphatase OS=Salmonella newport (strain SL254) GN=nudC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 1 
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   +FCG+CG    P +      CS+  C++R YP++ P +I+ +  R  D +LL++  R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKFCGYCGHPMHPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RREDSILLAQHVRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192
[Close]
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_SALG2 (NADH pyrophosphatase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=nudC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 1 
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   +FCG+CG    P +      CS+  C++R YP++ P +I+ +  R  D +LL++  R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKFCGYCGHPMHPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RREDSILLAQHVRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192
[Close]
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_SALEP (NADH pyrophosphatase OS=Salmonella enteritidis PT4 (strain P125109) GN=nudC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 1 
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   +FCG+CG    P +      CS+  C++R YP++ P +I+ +  R  D +LL++  R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKFCGYCGHPMHPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RREDSILLAQHVRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192
The following BLAST results are available for this feature:
BLAST of CX671601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
NUDC_PSEPF6.126e-1641.53NADH pyrophosphatase OS=Pseudomonas fluorescens (s... [more]
NUDC_SALTY1.045e-1537.93NADH pyrophosphatase OS=Salmonella typhimurium GN=... [more]
NUDC_SALSV1.045e-1537.93NADH pyrophosphatase OS=Salmonella schwarzengrund ... [more]
NUDC_SALPK1.045e-1537.93NADH pyrophosphatase OS=Salmonella paratyphi A (st... [more]
NUDC_SALPC1.045e-1537.93NADH pyrophosphatase OS=Salmonella paratyphi C (st... [more]
NUDC_SALPB1.045e-1537.93NADH pyrophosphatase OS=Salmonella paratyphi B (st... [more]
NUDC_SALPA1.045e-1537.93NADH pyrophosphatase OS=Salmonella paratyphi A GN=... [more]
NUDC_SALNS1.045e-1537.93NADH pyrophosphatase OS=Salmonella newport (strain... [more]
NUDC_SALG21.045e-1537.93NADH pyrophosphatase OS=Salmonella gallinarum (str... [more]
NUDC_SALEP1.045e-1537.93NADH pyrophosphatase OS=Salmonella enteritidis PT4... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12A11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12A11-B22-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671601 ID=CX671601; Name=CX671601; organism=Citrus sinensis; type=EST; length=780bp
CCAACTTCGGCTCTTGAATCACTCAAAACAAGACTTTTAGACAATACCCT
TCACTGCCAACCACAAAAACACCATTCATCATTATCATCATCATCTTCTT
CTTCTCCTGATTTCAAGGTCTTGCCTTTCAGAAAGGGCAGGCCTTTGACT
TATTCTGGCCCTGGTGAGACGGCGCCGGTTTGGCATCTGGGTTGGATCAG
TTTGGGTGATTGCAAGATTTTCTTGGCGAATTCTGGGATTGAGTTGAAGG
AAGAGGCTTTGGTTTATCTGGGTTCTCGGTCTGCGGATGATGTGGTTTAT
TGGGCAATTGATGTGTCTGACGGGGATAGCTTGGCTTCTGAATTCGGTAG
TAAACAATTATGCTTTGTGGAGCTGAGGACGCTTATGGTGGCTACTGATT
GGGCTGATCAGCGGGCTATGGCTGATTTGGCTATTGCCGGTCATGCCAGG
GCATTACTAGAGTGGCATAATGTATCACGGTTTTGTGGACATTGTGGGGA
AAAAACAATCCCTAAGGAAGCTGGGAAACTGAAGCAGTGCTCAAATGCAT
CGTGCAAAAAGAGGATATACCCTCGTGTTGATCCAGTGGTCATTATGTTG
GTCATTGACAGAGAGAATGATCGTGTACTTTTAAGCAGACAATCAAGATT
TGTCCCACGAATGTGGAGCTGCATAGCTGGTTTTATAGAGCCTGGAGAAA
GCTTAGAAGAAGCAGTGAGGAGAGAAACATGGGAAGAGACTGGCATTGAA
GTTGGGGAAGTTGTCTATCATACTTCTCAA
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