CX671601

Overview
NameCX671601
Unique NameCX671601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_SALDC (NADH pyrophosphatase OS=Salmonella dublin (strain CT_02021853) GN=nudC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 1
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   +FCG+CG    P +      CS+  C++R YP++ P +I+ +  R  D +LL++  R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKFCGYCGHPMHPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RREDSILLAQHVRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_SALCH (NADH pyrophosphatase OS=Salmonella choleraesuis GN=nudC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 1
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   +FCG+CG    P +      CS+  C++R YP++ P +I+ +  R  D +LL++  R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKFCGYCGHPMHPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RREDSILLAQHVRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_SALA4 (NADH pyrophosphatase OS=Salmonella agona (strain SL483) GN=nudC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 1
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   +FCG+CG    P +      CS+  C++R YP++ P +I+ +  R  D +LL++  R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHKFCGYCGHPMHPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RREDSILLAQHVRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYITSQ 192          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_PSEE4 (NADH pyrophosphatase OS=Pseudomonas entomophila (strain L48) GN=nudC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15
Identity = 47/116 (40.52%), Postives = 62/116 (53.45%), Query Frame = 1
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            + G+A  +  W    RFCG CG+        +   C    C  R YPR+ P +I+L+     D VLL+R  RFV  ++S +AGF EPGES EE + RE  EE  IEV  + Y  SQ
Sbjct:   95 VLGYAAQIGTWAREHRFCGSCGQPMTQIHWERAMYCQ--PCDLRSYPRISPSMIVLIT--RGDEVLLARSPRFVTGVYSTLAGFAEPGESAEECLVREVREEVAIEVRNIQYVGSQ 206          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_MANSM (NADH pyrophosphatase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=nudC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15
Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = 1
Query:  478 RFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPR-----MWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +FCG CG+KT+  E     QC+N  C  R YP + P +I+ +  R    +LL+   R  P+     M++ +AGF+E GES E+ + RE +EETGI+V  + Y  SQ
Sbjct:   97 QFCGKCGDKTMQTEDEWAVQCTNEECNYRTYPVICPSIIVAI--RRGKEILLANHRRHAPKYGKGGMYTTLAGFVEVGESFEQTIHREVFEETGIKVKNIRYFGSQ 200          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_EDWI9 (NADH pyrophosphatase OS=Edwardsiella ictaluri (strain 93-146) GN=nudC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15
Identity = 55/158 (34.81%), Postives = 86/158 (54.43%), Query Frame = 1
Query:  331 LASEFGSKQLCFVELRTLMVATDWADQRAMAD-----LAIAGHARALLEWHNVSRFCGHCGEKTIPKEAGK---LKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +A   G  Q   V L  L    D A  R + D       +AG    L E+    RFCG+CG    P  AG+   ++ C  A C++R YP++ P +I+ +  R +D +LL+R +R    +++ +AGF+E GE+LE+A  RE +EE+ ++V  + Y TSQ
Sbjct:   42 MAYRIGEWQGMPVWLLCLTYPQDMASVRQLIDADRGLFQLAGRGVQLAEFFQSHRFCGYCGH---PMHAGQQEWVRLC--AHCQQRYYPQIAPCIIVAI--RRDDHILLARHNRHRNGIYTVLAGFVEVGETLEQAAAREIFEESRLQVKNLRYVTSQ 192          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_PSEU5 (NADH pyrophosphatase OS=Pseudomonas stutzeri (strain A1501) GN=nudC PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15
Identity = 43/116 (37.07%), Postives = 66/116 (56.90%), Query Frame = 1
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            + G+A  +  W +  RFCG CG     +   +   C   +C  + YPR+ P +I+LV     D +LL+R  RF P ++S +AG++EPGES+E+ V RE  EE G+++    Y  SQ
Sbjct:   95 LLGYATQIGTWVSQHRFCGSCGSPMHARAGERAMYCP--ACGVQHYPRLSPSMIVLVT--RGDELLLARSPRFAPGVYSTLAGYVEPGESVEQCVAREVREEVGVDIHPPQYIASQ 206          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_ENTS8 (NADH pyrophosphatase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=nudC PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15
Identity = 44/133 (33.08%), Postives = 77/133 (57.89%), Query Frame = 1
Query:  397 DWADQRAMAD-----LAIAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            D A  R + D       +AG    L E++   ++CG+CG +  P +      C +  C++R YP++ P +I+ +  R +D++LL++ +R    +++ +AGF+E GE+LE+AV RE  EE+ I +  + Y TSQ
Sbjct:   64 DMASVRQLIDQDAGLFQLAGRGVQLAEFYRSHKYCGYCGHEMHPSKTEWAMLCGH--CRERYYPQIAPCIIVAI--RRDDKILLAQHTRHRNGVYTVLAGFVEVGETLEQAVAREVMEESNIRIKNLRYVTSQ 192          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_KLEP3 (NADH pyrophosphatase OS=Klebsiella pneumoniae (strain 342) GN=nudC PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.328e-15
Identity = 43/116 (37.07%), Postives = 72/116 (62.07%), Query Frame = 1
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   +FCG+CG      ++     CS+  C++R YP++ P +I+ +  R +D +LL++ +R    + + +AGF+E GE+LE+AV RE  EE+GI+V  + Y TSQ
Sbjct:   81 LAGRGIQLAEFYRSHKFCGYCGHPMHASKSEWAMLCSH--CRERYYPQIAPCIIVAI--RRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQ 192          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_ERWCT (NADH pyrophosphatase OS=Erwinia carotovora subsp. atroseptica GN=nudC PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.328e-15
Identity = 45/134 (33.58%), Postives = 76/134 (56.72%), Query Frame = 1
Query:  394 TDWADQRAMAD-----LAIAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            TD A  R + D       +AG    L E++   RFCG+CG + +  +      C +  CK+R YP++ P +I+ +  R  + +LL++ +R    M++ +AGF+E GE+LE+ V RE  EE+ I++  + Y +SQ
Sbjct:   63 TDMASVRQLLDQDVGLFQLAGRGVQLAEFYRSHRFCGYCGHEMVRSKTELACLCHH--CKERYYPQIAPCIIVAI--RRGEEILLAQHNRHRGNMYTVLAGFVEVGETLEQTVVREVMEESQIQIKNLRYVSSQ 192          
The following BLAST results are available for this feature:
BLAST of CX671601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
NUDC_SALDC1.045e-1537.93NADH pyrophosphatase OS=Salmonella dublin (strain ... [more]
NUDC_SALCH1.045e-1537.93NADH pyrophosphatase OS=Salmonella choleraesuis GN... [more]
NUDC_SALA41.045e-1537.93NADH pyrophosphatase OS=Salmonella agona (strain S... [more]
NUDC_PSEE41.045e-1540.52NADH pyrophosphatase OS=Pseudomonas entomophila (s... [more]
NUDC_MANSM1.045e-1539.62NADH pyrophosphatase OS=Mannheimia succiniciproduc... [more]
NUDC_EDWI91.045e-1534.81NADH pyrophosphatase OS=Edwardsiella ictaluri (str... [more]
NUDC_PSEU51.365e-1537.07NADH pyrophosphatase OS=Pseudomonas stutzeri (stra... [more]
NUDC_ENTS81.365e-1533.08NADH pyrophosphatase OS=Enterobacter sakazakii (st... [more]
NUDC_KLEP32.328e-1537.07NADH pyrophosphatase OS=Klebsiella pneumoniae (str... [more]
NUDC_ERWCT2.328e-1533.58NADH pyrophosphatase OS=Erwinia carotovora subsp. ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12A11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12A11-B22-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671601 ID=CX671601; Name=CX671601; organism=Citrus sinensis; type=EST; length=780bp
CCAACTTCGGCTCTTGAATCACTCAAAACAAGACTTTTAGACAATACCCT
TCACTGCCAACCACAAAAACACCATTCATCATTATCATCATCATCTTCTT
CTTCTCCTGATTTCAAGGTCTTGCCTTTCAGAAAGGGCAGGCCTTTGACT
TATTCTGGCCCTGGTGAGACGGCGCCGGTTTGGCATCTGGGTTGGATCAG
TTTGGGTGATTGCAAGATTTTCTTGGCGAATTCTGGGATTGAGTTGAAGG
AAGAGGCTTTGGTTTATCTGGGTTCTCGGTCTGCGGATGATGTGGTTTAT
TGGGCAATTGATGTGTCTGACGGGGATAGCTTGGCTTCTGAATTCGGTAG
TAAACAATTATGCTTTGTGGAGCTGAGGACGCTTATGGTGGCTACTGATT
GGGCTGATCAGCGGGCTATGGCTGATTTGGCTATTGCCGGTCATGCCAGG
GCATTACTAGAGTGGCATAATGTATCACGGTTTTGTGGACATTGTGGGGA
AAAAACAATCCCTAAGGAAGCTGGGAAACTGAAGCAGTGCTCAAATGCAT
CGTGCAAAAAGAGGATATACCCTCGTGTTGATCCAGTGGTCATTATGTTG
GTCATTGACAGAGAGAATGATCGTGTACTTTTAAGCAGACAATCAAGATT
TGTCCCACGAATGTGGAGCTGCATAGCTGGTTTTATAGAGCCTGGAGAAA
GCTTAGAAGAAGCAGTGAGGAGAGAAACATGGGAAGAGACTGGCATTGAA
GTTGGGGAAGTTGTCTATCATACTTCTCAA
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