CX671601

Overview
NameCX671601
Unique NameCX671601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_YERPG (NADH pyrophosphatase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=nudC PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.734e-14
Identity = 42/116 (36.21%), Postives = 67/116 (57.76%), Query Frame = 1
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   RFCG+CG +           C++  C++R YP++ P VI+ +  R  D +LL++  R    + + +AGF+E GE+LE+AV RE  EE+ I +  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHRFCGYCGHEMHASRTEWASLCNH--CRERYYPQIAPCVIVAI--RRGDEILLAQHVRHRGGINTVLAGFVEVGETLEQAVSREVLEESNIHIKNLRYVTSQ 192          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_YERPE (NADH pyrophosphatase OS=Yersinia pestis GN=nudC PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.734e-14
Identity = 42/116 (36.21%), Postives = 67/116 (57.76%), Query Frame = 1
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   RFCG+CG +           C++  C++R YP++ P VI+ +  R  D +LL++  R    + + +AGF+E GE+LE+AV RE  EE+ I +  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHRFCGYCGHEMHASRTEWASLCNH--CRERYYPQIAPCVIVAI--RRGDEILLAQHVRHRGGINTVLAGFVEVGETLEQAVSREVLEESNIHIKNLRYVTSQ 192          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_YERPB (NADH pyrophosphatase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=nudC PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.734e-14
Identity = 42/116 (36.21%), Postives = 67/116 (57.76%), Query Frame = 1
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   RFCG+CG +           C++  C++R YP++ P VI+ +  R  D +LL++  R    + + +AGF+E GE+LE+AV RE  EE+ I +  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHRFCGYCGHEMHASRTEWASLCNH--CRERYYPQIAPCVIVAI--RRGDEILLAQHVRHRGGINTVLAGFVEVGETLEQAVSREVLEESNIHIKNLRYVTSQ 192          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_YERPA (NADH pyrophosphatase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=nudC PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.734e-14
Identity = 42/116 (36.21%), Postives = 67/116 (57.76%), Query Frame = 1
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   RFCG+CG +           C++  C++R YP++ P VI+ +  R  D +LL++  R    + + +AGF+E GE+LE+AV RE  EE+ I +  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHRFCGYCGHEMHASRTEWASLCNH--CRERYYPQIAPCVIVAI--RRGDEILLAQHVRHRGGINTVLAGFVEVGETLEQAVSREVLEESNIHIKNLRYVTSQ 192          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_YERP3 (NADH pyrophosphatase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=nudC PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.734e-14
Identity = 42/116 (36.21%), Postives = 67/116 (57.76%), Query Frame = 1
Query:  433 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            +AG    L E++   RFCG+CG +           C++  C++R YP++ P VI+ +  R  D +LL++  R    + + +AGF+E GE+LE+AV RE  EE+ I +  + Y TSQ
Sbjct:   81 LAGRGVQLAEFYRSHRFCGYCGHEMHASRTEWASLCNH--CRERYYPQIAPCVIVAI--RRGDEILLAQHVRHRGGINTVLAGFVEVGETLEQAVSREVLEESNIHIKNLRYVTSQ 192          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_ERWT9 (NADH pyrophosphatase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=nudC PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.716e-13
Identity = 55/196 (28.06%), Postives = 94/196 (47.96%), Query Frame = 1
Query:  193 WISLGDCKIFLANSGIELKEEALVYLGSRSADDVVYWAIDVSDGDSLASEFGSKQLCFVELRTLMVATDWADQRAMADLAIAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            W+   + KI+L    +   + A + L   S   +  W      G+++    GS+      LR L+        R  A   +AG    L E+    ++CG+CG K           C +  C++R YP++ P +I+ +  R    +LL++ +R    +++ +AGF+E GE+LE+ V RE  EE+ I+V  + Y TSQ
Sbjct:   13 WVVSEEHKIWLPAGELPHGDAASLGLAGSSGSRIGEW-----QGEAVWLIRGSRPDDMGSLRQLL-------DRDSALFRLAGRGIQLAEFFRSHQWCGYCGHKMHNSRTEWACLCHH--CRQRYYPQIAPCIIVAI--RRGAEILLAQHTRHRNGIYTVLAGFVEVGETLEQTVAREVMEESSIKVKNLRYVTSQ 192          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_ACTSZ (NADH pyrophosphatase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=nudC PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.716e-13
Identity = 41/106 (38.68%), Postives = 60/106 (56.60%), Query Frame = 1
Query:  478 RFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPR-----MWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            R CG CG +T         QC N +C  R YP + P +I+ V  R    +LL+  +R +P+     M++ +AGF+E GES E+ V RE +EETG++V  + Y  SQ
Sbjct:   97 RRCGKCGHQTEMARDEWAVQCQNDACGYRTYPVICPSIIVAV--RRGKEILLANHTRHMPKNGGSGMYTTLAGFVEIGESFEQTVEREVFEETGLKVKNIRYFGSQ 200          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_VIBSL (NADH pyrophosphatase OS=Vibrio splendidus (strain LGP32) GN=nudC PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.081e-12
Identity = 48/140 (34.29%), Postives = 70/140 (50.00%), Query Frame = 1
Query:  361 CFVELRTLMVATDWADQRAMADLAIAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            C VE+   MV+         +   IA  A          RFC  CG +          QC +  C+   YPR+ P +I+ V  R ++++LL++  R    M++ IAGF+E GE+LE+ V RE  EETGI+V  + Y  SQ
Sbjct:   62 CDVEIELSMVSLRDLLHWPESSFLIASKAIQYGHMTQSMRFCPQCGGRNHLNHNQVAMQCGD--CRTLHYPRIFPCIIVAV--RNDNKILLAQHPRHKTGMYTVIAGFLEVGETLEQCVAREVKEETGIDVSNIRYFGSQ 197          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_VIBVU (NADH pyrophosphatase OS=Vibrio vulnificus GN=nudC PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.109e-12
Identity = 41/101 (40.59%), Postives = 56/101 (55.45%), Query Frame = 1
Query:  478 RFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            RFC  CG +          QC    C+   YPR+ P +I+ V  R+   +LL++  R    M++ IAGF+E GE+LE+ V RE  EETGIEV  + Y  SQ
Sbjct:  101 RFCPQCGGRNHLNHNQLAMQCGE--CRTLHYPRIFPCIIVAV--RKQQHILLAQHPRHRSGMYTVIAGFVEVGETLEQCVAREVKEETGIEVTNIRYFGSQ 197          
BLAST of CX671601 vs. ExPASy Swiss-Prot
Match: NUDC_VIBPA (NADH pyrophosphatase OS=Vibrio parahaemolyticus GN=nudC PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.366e-12
Identity = 40/101 (39.60%), Postives = 57/101 (56.44%), Query Frame = 1
Query:  478 RFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLLSRQSRFVPRMWSCIAGFIEPGESLEEAVRRETWEETGIEVGEVVYHTSQ 780
            RFC  CG +          QC    C+   YPR+ P +I+ V  R+ +++LL++  R    M++ IAGF+E GE+LE+ V RE  EETGI V  + Y  SQ
Sbjct:  101 RFCPQCGGRNFLNNNQFAMQCGE--CRTLHYPRIFPCIIVAV--RKENQILLAQHPRHRNGMYTVIAGFLEAGETLEDCVAREVHEETGIHVKNIRYFGSQ 197          
The following BLAST results are available for this feature:
BLAST of CX671601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
NUDC_YERPG5.734e-1436.21NADH pyrophosphatase OS=Yersinia pestis bv. Antiqu... [more]
NUDC_YERPE5.734e-1436.21NADH pyrophosphatase OS=Yersinia pestis GN=nudC PE... [more]
NUDC_YERPB5.734e-1436.21NADH pyrophosphatase OS=Yersinia pseudotuberculosi... [more]
NUDC_YERPA5.734e-1436.21NADH pyrophosphatase OS=Yersinia pestis bv. Antiqu... [more]
NUDC_YERP35.734e-1436.21NADH pyrophosphatase OS=Yersinia pseudotuberculosi... [more]
NUDC_ERWT93.716e-1328.06NADH pyrophosphatase OS=Erwinia tasmaniensis (stra... [more]
NUDC_ACTSZ3.716e-1338.68NADH pyrophosphatase OS=Actinobacillus succinogene... [more]
NUDC_VIBSL1.081e-1234.29NADH pyrophosphatase OS=Vibrio splendidus (strain ... [more]
NUDC_VIBVU4.109e-1240.59NADH pyrophosphatase OS=Vibrio vulnificus GN=nudC ... [more]
NUDC_VIBPA5.366e-1239.60NADH pyrophosphatase OS=Vibrio parahaemolyticus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12A11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12A11-B22-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671601 ID=CX671601; Name=CX671601; organism=Citrus sinensis; type=EST; length=780bp
CCAACTTCGGCTCTTGAATCACTCAAAACAAGACTTTTAGACAATACCCT
TCACTGCCAACCACAAAAACACCATTCATCATTATCATCATCATCTTCTT
CTTCTCCTGATTTCAAGGTCTTGCCTTTCAGAAAGGGCAGGCCTTTGACT
TATTCTGGCCCTGGTGAGACGGCGCCGGTTTGGCATCTGGGTTGGATCAG
TTTGGGTGATTGCAAGATTTTCTTGGCGAATTCTGGGATTGAGTTGAAGG
AAGAGGCTTTGGTTTATCTGGGTTCTCGGTCTGCGGATGATGTGGTTTAT
TGGGCAATTGATGTGTCTGACGGGGATAGCTTGGCTTCTGAATTCGGTAG
TAAACAATTATGCTTTGTGGAGCTGAGGACGCTTATGGTGGCTACTGATT
GGGCTGATCAGCGGGCTATGGCTGATTTGGCTATTGCCGGTCATGCCAGG
GCATTACTAGAGTGGCATAATGTATCACGGTTTTGTGGACATTGTGGGGA
AAAAACAATCCCTAAGGAAGCTGGGAAACTGAAGCAGTGCTCAAATGCAT
CGTGCAAAAAGAGGATATACCCTCGTGTTGATCCAGTGGTCATTATGTTG
GTCATTGACAGAGAGAATGATCGTGTACTTTTAAGCAGACAATCAAGATT
TGTCCCACGAATGTGGAGCTGCATAGCTGGTTTTATAGAGCCTGGAGAAA
GCTTAGAAGAAGCAGTGAGGAGAGAAACATGGGAAGAGACTGGCATTGAA
GTTGGGGAAGTTGTCTATCATACTTCTCAA
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