EY680240
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DBP5_PICST (ATP-dependent RNA helicase DBP5 OS=Pichia stipitis GN=DBP5 PE=3 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 4.139e-40 Identity = 86/199 (43.22%), Postives = 129/199 (64.82%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598 +L L+PELLKGLY MKF KPSKIQ +LP++++ P RN+I Q+++G+GKT F L MLSRVDP + + Q LC+ PTRELA Q LEV+ MGK T IT++ VP + + A +++GTPG + + K++ + +K+ V DEAD+MLD G D +R+ + + +++ Q++LFSATF V+ + + Sbjct: 114 ELGLTPELLKGLYA-MKFNKPSKIQEKALPLLISNPPRNMIGQSQSGTGKTAAFSLTMLSRVDPKVPSTQCLCLAPTRELARQTLEVISTMGKFTNITTQLIVPD------ALPRGSSTNAHIIVGTPGIVMDLIRRKQINVNGVKVFVLDEADNMLDAQGLGDQCVRVKRTLPKTT---QLVLFSATFPTKVRQYAEK 302
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DBP5_PICGU (ATP-dependent RNA helicase DBP5 OS=Pichia guilliermondii GN=DBP5 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.060e-40 Identity = 102/268 (38.06%), Postives = 150/268 (55.97%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRIC*RL*STFCQEKRVVI*NQ*SSIKFYCPDELAKVMVIRGKIFGT---------GKKKGAKNYIFAPQK 778 +L LSPELLKGLY MKF KPSKIQ +LP++++ P +N+I Q+++G+GKT F L MLSRVD N Q +C+ PTRELA Q LEV+ MGK T +T++ VP + K A +V+GTPGT+ + K L ++K+ V DEAD+MLD G +R+ K + S CQ++LFSATF V+ + + S +++ + + + + C E K V+ +++G K K NY++A K Sbjct: 96 ELGLSPELLKGLYA-MKFNKPSKIQEKALPLLISNPPKNMIGQSQSGTGKTAAFSLTMLSRVDVNDPNTQCICLSPTRELARQTLEVITTMGKFTKVTTQLVVPQ------AMEKNQGTQAHIVVGTPGTLLDMIKRKLLRTGKVKVFVLDEADNMLDGQGLAAQCIRVKKVLPTS---CQLVLFSATFPTEVRKYAEKFVPNANSLELKQEELNV-DAIKQLYMDCDSEKHKAEVL-SELYGLLTIGSSIIFVKTKATANYLYAKMK 351
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DBP5_YARLI (ATP-dependent RNA helicase DBP5 OS=Yarrowia lipolytica GN=DBP5 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.966e-38 Identity = 90/201 (44.78%), Postives = 129/201 (64.18%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRIC 604 DL L LLKGLY MKF KPSKIQ +LP++L+ P N+I Q+++G+GKT F L MLSRVDPNLKA Q +C+ P+RELA Q L+V+ +M K T IT+ VP + + VT+Q+++GTPG++ + K++ +K+ V DEAD+M+D + RI K + S+ QV+LFSATF E+V + ++C Sbjct: 103 DLGLDENLLKGLYA-MKFNKPSKIQEKALPLLLSDPPHNMIGQSQSGTGKTGAFSLTMLSRVDPNLKAVQCICLAPSRELARQTLDVVDEMKKFTDITTHLIVPEST------ERGQKVTSQILVGTPGSVAGLLQKKQIDAKHVKVFVLDEADNMVD-SSMGSTCARIKKYLPSST---QVVLFSATFPESVLDLAGKMC 292
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DDX25_BOVIN (ATP-dependent RNA helicase DDX25 OS=Bos taurus GN=DDX25 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.874e-38 Identity = 92/201 (45.77%), Postives = 126/201 (62.69%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKL-GFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRI 601 +L L ELLKG+Y M F +PSKIQ ++LPM+L P +NLIAQ+++G+GKT FVL MLSRV+ PQ LC+ PT ELA+Q V+ +MGK + N +P + VT Q+VIGTPGT+ W +KL +++++ V DEAD M+D GF D S+RI + + CQ+LLFSATF ++V F RI Sbjct: 101 ELRLKEELLKGIYA-MGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALKLFPQCLCLAPTYELALQTGRVVERMGKF--CVDVQVMYAIRGNRIP--RGTDVTKQIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFEDQSIRIQRAL---PSECQMLLFSATFEDSVWQFAERI 293
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DBP5_USTMA (ATP-dependent RNA helicase DBP5 OS=Ustilago maydis GN=DBP5 PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.874e-38 Identity = 84/199 (42.21%), Postives = 129/199 (64.82%), Query Frame = 2 Query: 5 LNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRI 601 L L LLKG+Y MK+QKPSKIQ +LP++L P +N+I Q+++G+GKT F+L MLSR+D +L+ PQA+ + P+RELA Q ++V R M K T +T+ +P + + + +TAQ++IGTPG + +K + + +K+ V DEAD+MLD+ + S+R+ + +S CQ++LFSATF V +F RI Sbjct: 69 LGLHENLLKGIYA-MKYQKPSKIQEKALPLLLQNPPKNMIGQSQSGTGKTAAFILTMLSRIDYDLQKPQAIALAPSRELARQIMDVARTMSKFTNVTTCLCLPDE------VKRGEKITAQLIIGTPGKTFDMIKSKGIDTAAIKVFVLDEADNMLDQQSLGEQSIRVKNTMPKS---CQLVLFSATFPTNVYDFAVRI 257
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DD19A_MOUSE (ATP-dependent RNA helicase DDX19A OS=Mus musculus GN=Ddx19a PE=1 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.608e-38 Identity = 90/202 (44.55%), Postives = 131/202 (64.85%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGK-HTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKK-LGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRI 601 +L L P+LL+G+Y M F +PSKIQ +LPM+L P +NLIAQ+++G+GKT FVL MLSRV+P + PQ LC+ PT ELA+Q +V+ +MGK H + AV + + + V+ Q+VIGTPGT+ W S K + ++K+ V DEAD M+ G +D S+RI + + R +CQ+LLFSATF ++V F ++ Sbjct: 95 ELRLKPQLLQGVYA-MGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPADRYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNK-----LERGQKVSEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRIVPR---NCQMLLFSATFEDSVWKFAQKV 287
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DDX25_MOUSE (ATP-dependent RNA helicase DDX25 OS=Mus musculus GN=Ddx25 PE=1 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 8.631e-38 Identity = 91/201 (45.27%), Postives = 125/201 (62.19%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKL-GFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRI 601 +L L ELLKG+Y M F +PSKIQ ++LPM+L P +NLIAQ+++G+GKT FVL MLSRV+ PQ LC+ PT ELA+Q V+ +MGK + E I + VT Q++IGTPGT+ W +KL +++++ V DEAD M+D GF D S+RI + + CQ+LLFSATF ++V F RI Sbjct: 102 ELRLKEELLKGIYA-MGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVERMGKFC-VDVEVMYAIRGNR---IPRGTEVTKQIIIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRAL---PSECQMLLFSATFEDSVWQFAERI 294
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DDX25_RAT (ATP-dependent RNA helicase DDX25 OS=Rattus norvegicus GN=Ddx25 PE=1 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 1.472e-37 Identity = 91/201 (45.27%), Postives = 125/201 (62.19%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKL-GFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRI 601 +L L ELLKG+Y M F +PSKIQ ++LPM+L P +NLIAQ+++G+GKT FVL ML+RV+ PQ LC+ PT ELA+Q V+ +MGK + E I + VT Q+VIGTPGT+ W +KL +++++ V DEAD M+D GF D S+RI + + CQ+LLFSATF ++V F RI Sbjct: 101 ELRLKEELLKGIYA-MGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLNRVNALELFPQCLCLAPTYELALQTGRVVERMGKFC-VDVEVMYAIRGNR---IPRGTDVTKQIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRAL---PSECQMLLFSATFEDSVWQFAERI 293
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DD19A_HUMAN (ATP-dependent RNA helicase DDX19A OS=Homo sapiens GN=DDX19A PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.511e-37 Identity = 88/202 (43.56%), Postives = 132/202 (65.35%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGK-HTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKK-LGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRI 601 +L L P+LL+G+Y M F +PSKIQ +LPM+L P +NLIAQ+++G+GKT FVL MLSRV+P+ + PQ LC+ PT ELA+Q +V+ +MGK + + AV + + + ++ Q+VIGTPGT+ W S K + ++K+ V DEAD M+ G +D S+RI + + R +CQ+LLFSATF ++V F ++ Sbjct: 95 ELRLKPQLLQGVYA-MGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNK-----LERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPR---NCQMLLFSATFEDSVWKFAQKV 287
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DDX25_HUMAN (ATP-dependent RNA helicase DDX25 OS=Homo sapiens GN=DDX25 PE=1 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 3.280e-37 Identity = 89/201 (44.28%), Postives = 126/201 (62.69%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKW-MSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRI 601 +L L ELLKG+Y M F +PSKIQ ++LPM+L P +NLIAQ+++G+GKT FVL MLSRV+ PQ LC+ PT ELA+Q V+ +MGK + N +P + +T Q++IGTPGT+ W K + +++++ V DEAD M+D GF D S+RI + + CQ+LLFSATF ++V +F RI Sbjct: 101 ELRLKEELLKGIYA-MGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKF--CVDVQVMYAIRGNRIP--RGTDITKQIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRAL---PSECQMLLFSATFEDSVWHFAERI 293 The following BLAST results are available for this feature:
BLAST of EY680240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY680240 ID=EY680240; Name=EY680240; organism=Citrus sinensis; type=EST; length=856bpback to top |