EY680240
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: IF4A_NEUCR (ATP-dependent RNA helicase eIF4A OS=Neurospora crassa GN=tif-1 PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 4.598e-23 Identity = 73/199 (36.68%), Postives = 112/199 (56.28%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598 ++NL PELL+G+Y F++PS IQ ++ ++ ++IAQA++G+GKT F + +L ++DP+LKA QAL + PTRELA Q +V+ +G I EC T+ K QVV+GTPG + + + L +K+ V DEAD ML GF + I + + +S+ QV+L SAT + V T+ Sbjct: 28 EMNLKPELLRGIYA-YGFERPSAIQQRAIMPVIKG--HDVIAQAQSGTGKTATFSISVLQKIDPSLKACQALILAPTRELAQQIQKVVVAIGDFMNI--ECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSR-GFTEQIYDIFQLLPQST---QVVLLSATMPQDVLEVTTK 217
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DEAD_SHIFL (Cold-shock DEAD box protein A OS=Shigella flexneri GN=deaD PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 4.598e-23 Identity = 77/201 (38.31%), Postives = 107/201 (53.23%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPIS--KRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598 DL L +L+ L ++ ++KPS IQA +P +L R+++ A+ GSGKT F L +L +DP LKAPQ L + PTRELA+Q E + KH + A+ V + ++ P Q+V+GTPG + + L S+L LV DEAD ML GF +D IM I GH Q LFSAT E ++ R Sbjct: 10 DLGLKAPILEALN-DLGYEKPSPIQAECIPHLLNG--RDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGP---QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEML-RMGFIEDVETIMAQI--PEGH-QTALFSATMPEAIRRITRR 200
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DEAD_ECOLI (Cold-shock DEAD box protein A OS=Escherichia coli (strain K12) GN=deaD PE=1 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 4.598e-23 Identity = 77/201 (38.31%), Postives = 107/201 (53.23%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPIS--KRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598 DL L +L+ L ++ ++KPS IQA +P +L R+++ A+ GSGKT F L +L +DP LKAPQ L + PTRELA+Q E + KH + A+ V + ++ P Q+V+GTPG + + L S+L LV DEAD ML GF +D IM I GH Q LFSAT E ++ R Sbjct: 10 DLGLKAPILEALN-DLGYEKPSPIQAECIPHLLNG--RDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGP---QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEML-RMGFIEDVETIMAQI--PEGH-QTALFSATMPEAIRRITRR 200
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DEAD_ECOL6 (Cold-shock DEAD box protein A OS=Escherichia coli O6 GN=deaD PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 4.598e-23 Identity = 77/201 (38.31%), Postives = 107/201 (53.23%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPIS--KRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598 DL L +L+ L ++ ++KPS IQA +P +L R+++ A+ GSGKT F L +L +DP LKAPQ L + PTRELA+Q E + KH + A+ V + ++ P Q+V+GTPG + + L S+L LV DEAD ML GF +D IM I GH Q LFSAT E ++ R Sbjct: 10 DLGLKAPILEALN-DLGYEKPSPIQAECIPHLLNG--RDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGP---QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEML-RMGFIEDVETIMAQI--PEGH-QTALFSATMPEAIRRITRR 200
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DEAD_ECO57 (Cold-shock DEAD box protein A OS=Escherichia coli O157:H7 GN=deaD PE=3 SV=3) HSP 1 Score: 108.612 bits (270), Expect = 4.598e-23 Identity = 77/201 (38.31%), Postives = 107/201 (53.23%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPIS--KRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598 DL L +L+ L ++ ++KPS IQA +P +L R+++ A+ GSGKT F L +L +DP LKAPQ L + PTRELA+Q E + KH + A+ V + ++ P Q+V+GTPG + + L S+L LV DEAD ML GF +D IM I GH Q LFSAT E ++ R Sbjct: 10 DLGLKAPILEALN-DLGYEKPSPIQAECIPHLLNG--RDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGP---QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEML-RMGFIEDVETIMAQI--PEGH-QTALFSATMPEAIRRITRR 200
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: IF4A_NEOFI (ATP-dependent RNA helicase eIF4A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tif1 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.024e-22 Identity = 73/198 (36.87%), Postives = 109/198 (55.05%), Query Frame = 2 Query: 5 LNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598 + L PELL+G+Y F++PS IQ ++ I+ ++IAQA++G+GKT F + L ++DPN+K QAL + PTRELA Q +V+ +G I EC TN K QVV+GTPG ++ + + L LK+ + DEAD ML GF + I + + +S+ QV+L SAT + V T+ Sbjct: 30 MELKPELLRGIYA-YGFERPSAIQQRAILPIIKG--NDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMNI--ECHACIGGTNVREDMKALQEGPQVVVGTPGRVQDMIQRRVLRTDNLKMFILDEADEMLSR-GFTEQIYDIFQLLPQST---QVVLLSATMPQDVLEVTTK 218
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: IF4A_ASPFU (ATP-dependent RNA helicase eIF4A OS=Aspergillus fumigatus GN=tif1 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.024e-22 Identity = 73/198 (36.87%), Postives = 110/198 (55.56%), Query Frame = 2 Query: 5 LNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598 ++L PELL+G+Y F++PS IQ ++ I+ ++IAQA++G+GKT F + L ++DPN+K QAL + PTRELA Q +V+ +G I EC TN K QVV+GTPG ++ + + L LK+ + DEAD ML GF + I + + +S+ QV+L SAT + V T+ Sbjct: 30 MDLKPELLRGVYA-YGFERPSAIQQRAILPIIKG--NDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMNI--ECHACIGGTNVREDMKALQEGPQVVVGTPGRVQDMIQRRVLRTDNLKMFILDEADEMLSR-GFTEQIYDIFQLLPQST---QVVLLSATMPQDVLEVTTK 218
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DHH1_CRYNE (ATP-dependent RNA helicase DHH1 OS=Cryptococcus neoformans GN=DHH1 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.338e-22 Identity = 73/200 (36.50%), Postives = 107/200 (53.50%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHC----QVLLFSATFNETVKNF 589 D L ELL G+Y F++PS IQ ++PM LT R+++A+A+NG+GKT F++ L+R++ +L QAL + PTRELA+Q +V + +G H + + T T R +++GTPG I S ++ + V DEAD +L E M IE++ C QV+LFSATF TVK F Sbjct: 40 DFGLRRELLMGIYTA-GFERPSPIQEQAIPMALTG--RDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIP-NLQVMITTGGTTLRDDILRLQQPVHILVGTPGRILDLGSKGIASLNKCGVFVMDEADKLLSE--------DFMPVIEQTLALCPQERQVMLFSATFPWTVKEF 227
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: FAL1_PICST (ATP-dependent RNA helicase FAL1 OS=Pichia stipitis GN=FAL1 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.747e-22 Identity = 68/192 (35.42%), Postives = 109/192 (56.77%), Query Frame = 2 Query: 5 LNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETV 580 +NL P+LLKG+Y F+ PS IQ+ ++ I+ R+ IAQA++G+GKT F +GML +D N K QAL + PTRELA+Q V++ +G + I + + T+ K+ Q+V GTPG + + ++L +K+L+ DEAD + + GF++ + K + S QV++ SAT + V Sbjct: 31 MNLKPDLLKGIY-GYGFEAPSAIQSRAIMQIING--RDTIAQAQSGTGKTATFSIGMLQAIDTNAKDCQALILSPTRELAVQIQNVVKHLGDYMNIHTHACI--GGTHVGDDIKKLKQGQQIVSGTPGRVVDMVKRQQLSTRNIKMLILDEADELFTK-GFKEQIYEVYKYLPPS---VQVVVVSATLSREV 213
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DHH1_PHANO (ATP-dependent RNA helicase DHH1 OS=Phaeosphaeria nodorum GN=DHH1 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.747e-22 Identity = 74/200 (37.00%), Postives = 104/200 (52.00%), Query Frame = 2 Query: 2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSG----HCQVLLFSATFNETVKNF 589 D + EL+ G++ E F+KPS IQ ++P+ LT R+++A+A+NG+GKT FV+ L RV+P + QAL + PTRELA+Q +V + +GKH GI V T T R +++GTPG I S + V DEAD +L S +E+ G QV+LFSATF VK F Sbjct: 53 DFFIKRELMMGIF-EAGFEKPSPIQEETIPVALTG--RDILARAKNGTGKTAAFVIPTLERVNPKISKTQALILVPTRELALQTSQVCKTLGKHLGI--NVMVSTGGTGLKDDIIRLSDPVHIIVGTPGRILDLAGKGVADLSTCQTFVMDEADKLL--------SPEFTPVVEQLLGFHPKDRQVMLFSATFPIVVKTF 239 The following BLAST results are available for this feature:
BLAST of EY680240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680240 ID=EY680240; Name=EY680240; organism=Citrus sinensis; type=EST; length=856bpback to top |