EY680240

Overview
NameEY680240
Unique NameEY680240
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: RH12_ARATH (DEAD-box ATP-dependent RNA helicase 12 OS=Arabidopsis thaliana GN=RH12 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.980e-22
Identity = 76/202 (37.62%), Postives = 115/202 (56.93%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLK---ILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598
            D  L  +LLKG+Y E  F+KPS IQ  S+P+ LT    +++A+A+NG+GKT  F + +L ++DPN    QA+ + PTRELA+Q  +V +++ K+  I  +  V T  T+      R      +++GTPG I   +   K G   LK   +LV DEAD +L  A F+     +++ + ++    Q L+FSATF  TVK F  R
Sbjct:  128 DYFLKRDLLKGIY-EKGFEKPSPIQEESIPIALTGS--DILARAKNGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNI--QVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRI---LDLTKKGVCVLKDCAMLVMDEADKLL-SAEFQPSLEELIQFLPQNR---QFLMFSATFPVTVKAFKDR 317          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DDX6_XENLA (ATP-dependent RNA helicase ddx6 OS=Xenopus laevis GN=ddx6 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.980e-22
Identity = 72/199 (36.18%), Postives = 116/199 (58.29%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERS-SGHCQVLLFSATFNETVKNFVT 595
            D  L  ELL G++ EM ++KPS IQ  S+P+ L+   R+++A+A+NG+GK+  +++ +L R+D      QA+ I PTRELA+Q  ++  ++ KH G  ++    T  TN      R   T  VVI TPG I   +         ++++V DEAD +L +     D ++IM+DI  +   + Q+LL+SATF  +V+ F+T
Sbjct:   99 DYCLKRELLMGIF-EMGWEKPSPIQEESIPIALSG--RDILARAKNGTGKSGAYLIPLLERLDLKKDCIQAMVIVPTRELALQVSQICIQVSKHMG-GAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHIQMIVLDEADKLLSQ-----DFMQIMEDIIMTLPKNRQILLYSATFPLSVQKFMT 288          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: IF4A_CANGA (ATP-dependent RNA helicase eIF4A OS=Candida glabrata GN=TIF1 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.892e-22
Identity = 69/193 (35.75%), Postives = 112/193 (58.03%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETV 580
            D+NL+ +LL+G++    F KPS IQ  ++  I+     +++AQA++G+GKT  F +  L R+DP +KAPQAL + PTRELA+Q  +V+  +G H  I     +    T++V  ++     AQ+V+GTPG +   +  +K     +K+ + DEAD ML   GF++   +I   +  ++   QV+L SAT    V
Sbjct:   27 DMNLNEKLLRGVF-GYGFNKPSAIQQRAIMPIIEG--NDVLAQAQSGTGKTGTFSIAALQRIDPAIKAPQALMLAPTRELALQIQKVVMALGFHMDIKVHACI--GGTSFVEDAEGLR-DAQIVVGTPGRVFDNIQRRKFKVDNIKMFILDEADEML-STGFKEQIYQIFTMLPPTT---QVVLLSATMPRDV 209          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DHH1_NEOFI (ATP-dependent RNA helicase dhh1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dhh1 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.892e-22
Identity = 71/196 (36.22%), Postives = 105/196 (53.57%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNF 589
            D  +  EL+ G++ E  F+KPS IQ  ++P+ LT   R+++A+A+NG+GKT  FV+  L R++P     QAL + PTRELA+Q  +V + +GKH GI     V T  T  +    R      +++GTPG +    S      S     V DEAD +L      + +  I + +       QV+LFSATF   VK+F
Sbjct:   51 DFYIKRELMMGIF-EAGFEKPSPIQEETIPVALTG--RDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSQVCKTLGKHLGI--NVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLLSP----EFTPVIEQLLSFHPKDRQVMLFSATFPLIVKSF 237          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DHH1_GIBZE (ATP-dependent RNA helicase DHH1 OS=Gibberella zeae GN=DHH1 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.892e-22
Identity = 73/197 (37.06%), Postives = 104/197 (52.79%), Query Frame = 2
Query:   11 LSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIER----SSGHCQVLLFSATFNETVKNF 589
            L  +LL G++ E  F+KPS IQ  S+P+ LT   R+++A+A+NG+GKT  FV+  L R++P +   Q L + PTRELA+Q  +V + +GKH GI     V T  T       R      +V+GTPG I           S   + + DEAD +L        S+     IE+         QV+LFSATF  +VK+F
Sbjct:   49 LKRDLLMGIF-EAGFEKPSPIQEESIPVALTG--RDILARAKNGTGKTAAFVIPTLERINPKISKIQCLILVPTRELAMQTSQVCKTLGKHLGI--NVMVTTGGTGLRDDIIRLQDPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLL--------SIEFTPVIEQLLQFHPKDRQVMLFSATFPLSVKDF 232          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DHH1_ASPFU (ATP-dependent RNA helicase dhh1 OS=Aspergillus fumigatus GN=dhh1 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.892e-22
Identity = 71/196 (36.22%), Postives = 105/196 (53.57%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNF 589
            D  +  EL+ G++ E  F+KPS IQ  ++P+ LT   R+++A+A+NG+GKT  FV+  L R++P     QAL + PTRELA+Q  +V + +GKH GI     V T  T  +    R      +++GTPG +    S      S     V DEAD +L      + +  I + +       QV+LFSATF   VK+F
Sbjct:   51 DFYIKRELMMGIF-EAGFEKPSPIQEETIPVALTG--RDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSQVCKTLGKHLGI--NVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLLSP----EFTPVIEQLLSFHPKDRQVMLFSATFPLIVKSF 237          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DHH1_ASPCL (ATP-dependent RNA helicase dhh1 OS=Aspergillus clavatus GN=dhh1 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.892e-22
Identity = 71/196 (36.22%), Postives = 105/196 (53.57%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNF 589
            D  +  EL+ G++ E  F+KPS IQ  ++P+ LT   R+++A+A+NG+GKT  FV+  L R++P     QAL + PTRELA+Q  +V + +GKH GI     V T  T  +    R      +++GTPG +    S      S     V DEAD +L      + +  I + +       QV+LFSATF   VK+F
Sbjct:   51 DFYIKRELMMGIF-EAGFEKPSPIQEETIPVALTG--RDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSQVCKTLGKHLGI--NVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLLSP----EFTPVIEQLLSFHPKDRQVMLFSATFPLIVKSF 237          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DDX6_DROME (Putative ATP-dependent RNA helicase me31b OS=Drosophila melanogaster GN=me31B PE=1 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 3.892e-22
Identity = 75/199 (37.69%), Postives = 111/199 (55.78%), Query Frame = 2
Query:   11 LSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHM--LDEAGFRDD-SLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598
            L  ELL G++ E  +++PS IQ  ++P+ L+   ++++A+A+NG+GKT  + + +L ++DP     QAL + PTRELA+Q  ++  ++ KH  I     V T  T       R     Q++I TPG I   M  K    S  +ILV DEAD +  LD  G  D   L++ KD        Q+LLFSATF  TVKNF+ +
Sbjct:   65 LKRELLMGIF-EKGWERPSPIQEAAIPIALSG--KDVLARAKNGTGKTGAYCIPVLEQIDPTKDYIQALVMVPTRELALQTSQICIELAKHLDI--RVMVTTGGTILKDDILRIYQKVQLIIATPGRILDLMDKKVADMSHCRILVLDEADKLLSLDFQGMLDHVILKLPKD-------PQILLFSATFPLTVKNFMEK 251          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: IF4A_SCLS1 (ATP-dependent RNA helicase eIF4A OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tif1 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.083e-22
Identity = 71/198 (35.86%), Postives = 110/198 (55.56%), Query Frame = 2
Query:    5 LNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598
            +NL PELL+G+Y    F++PS IQ  ++  ++     ++IAQA++G+GKT  F + +L ++DPN+K  QAL + PTRELA Q  +V+  +G    +  EC      T+     K      QVV+GTPG +   +  + L    +K+ V DEAD ML   GF +    I + + +S+   QV+L SAT  + V    T+
Sbjct:   30 MNLKPELLRGVYA-YGFERPSAIQQRAIMPVIKG--HDVIAQAQSGTGKTATFSISVLQKLDPNVKQCQALILAPTRELAQQIQKVVVAIGDFMNV--ECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSR-GFTEQIYDIFQLLPQST---QVVLLSATMPQDVLEVTTK 218          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: IF4A_BOTFB (ATP-dependent RNA helicase eIF4A OS=Botryotinia fuckeliana (strain B05.10) GN=tif1 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.083e-22
Identity = 71/198 (35.86%), Postives = 110/198 (55.56%), Query Frame = 2
Query:    5 LNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598
            +NL PELL+G+Y    F++PS IQ  ++  ++     ++IAQA++G+GKT  F + +L ++DPN+K  QAL + PTRELA Q  +V+  +G    +  EC      T+     K      QVV+GTPG +   +  + L    +K+ V DEAD ML   GF +    I + + +S+   QV+L SAT  + V    T+
Sbjct:   30 MNLKPELLRGVYA-YGFERPSAIQQRAIMPVIKG--HDVIAQAQSGTGKTATFSISVLQKLDPNVKQCQALILAPTRELAQQIQKVVVAIGDFMNV--ECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSR-GFTEQIYDIFQLLPQST---QVVLLSATMPQDVLEVTTK 218          
The following BLAST results are available for this feature:
BLAST of EY680240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RH12_ARATH2.980e-2237.62DEAD-box ATP-dependent RNA helicase 12 OS=Arabidop... [more]
DDX6_XENLA2.980e-2236.18ATP-dependent RNA helicase ddx6 OS=Xenopus laevis ... [more]
IF4A_CANGA3.892e-2235.75ATP-dependent RNA helicase eIF4A OS=Candida glabra... [more]
DHH1_NEOFI3.892e-2236.22ATP-dependent RNA helicase dhh1 OS=Neosartorya fis... [more]
DHH1_GIBZE3.892e-2237.06ATP-dependent RNA helicase DHH1 OS=Gibberella zeae... [more]
DHH1_ASPFU3.892e-2236.22ATP-dependent RNA helicase dhh1 OS=Aspergillus fum... [more]
DHH1_ASPCL3.892e-2236.22ATP-dependent RNA helicase dhh1 OS=Aspergillus cla... [more]
DDX6_DROME3.892e-2237.69Putative ATP-dependent RNA helicase me31b OS=Droso... [more]
IF4A_SCLS15.083e-2235.86ATP-dependent RNA helicase eIF4A OS=Sclerotinia sc... [more]
IF4A_BOTFB5.083e-2235.86ATP-dependent RNA helicase eIF4A OS=Botryotinia fu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-008-H09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680240 ID=EY680240; Name=EY680240; organism=Citrus sinensis; type=EST; length=856bp
AGATTTGAATCTCTCACCAGAGCTCCTAAAGGGATTATACGTGGAAATGA
AATTCCAGAAGCCTAGCAAGATTCAAGCCATCAGTTTGCCTATGATCTTG
ACTCCTCCCTACAGAAATTTGATTGCTCAGGCACGTAATGGTTCTGGCAA
GACGACTTGTTTTGTGCTTGGGATGTTGAGCCGTGTTGATCCAAACCTCA
AGGCTCCACAAGCACTTTGCATTTGTCCTACCAGAGAATTGGCAATTCAG
AATTTGGAGGTTCTTCGTAAGATGGGGAAGCACACAGGGATAACTTCAGA
ATGTGCTGTGCCAACAGACAGCACCAATTATGTGCCAATATCAAAAAGGC
CACCAGTTACAGCACAAGTAGTGATTGGCACTCCTGGTACCATTAAGAAA
TGGATGTCAGCAAAGAAATTGGGTTTCAGTCGTTTGAAAATTCTTGTGTA
TGATGAGGCCGATCACATGCTTGATGAGGCTGGCTTTAGAGATGATTCTT
TGAGGATTATGAAGGACATTGAAAGAAGCAGTGGTCATTGCCAGGTTCTT
CTATTTTCAGCCACATTCAACGAAACTGTCAAGAATTTTGTAACAAGGAT
TTGTTAAAGATTATAATCAACTTTTTGTCAAGAAAAAAGAGTTGTCATTT
AAAATCAGTAAAGCAGTATAAAGTTTTACTGTCCCGACGAACTTGCCAAG
GTTATGGTAATCAGGGGAAAAATTTTTGGAACTGGGAAAAAAAAAGGGGC
AAAAAATTATATTTTTGCCCCACAAAAAAAATTGGAAAGCGCCTTGCCAA
AAACCCTTTAAAAAATTTGGGTTAAAAAAGCCCCAAAAATTTAGGGGGGG
CCAAAA
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