CX671593

Overview
NameCX671593
Unique NameCX671593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671593 vs. ExPASy Swiss-Prot
Match: PSBP3_TOBAC (Oxygen-evolving enhancer protein 2-3, chloroplastic OS=Nicotiana tabacum GN=PSBP3 PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.043e-71
Identity = 128/166 (77.11%), Postives = 147/166 (88.55%), Query Frame = -3
Query:  189 YNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASVR----PPYYFLSVLTRTADGDEGGKHQLITATVKGGKLYICKAQAGDKRWFKGARKYVESTASSFSVA 674
            YNGDGFKL IPSKWNP+KE E+PGQVLR+EDNFD+ SNV V ITPTDKKSITD+GSPE+FLS+VDYLLG+QAYSGKT SEGGF+ DAVA AN+LE S        YY+LS+LTRTADG+EGGKHQL+TATV  GKLYICKAQAGDKRWFKGA+K+VE+TA+SFS+A
Sbjct:  101 YNGDGFKLQIPSKWNPNKEVEYPGQVLRFEDNFDATSNVIVAITPTDKKSITDFGSPEQFLSQVDYLLGRQAYSGKTDSEGGFESDAVAIANVLETSTAEVGGKQYYYLSILTRTADGNEGGKHQLVTATVNDGKLYICKAQAGDKRWFKGAKKFVENTATSFSLA 266          
BLAST of CX671593 vs. ExPASy Swiss-Prot
Match: PSBP_BRAJU (Oxygen-evolving enhancer protein 2, chloroplastic (Fragment) OS=Brassica juncea GN=PSBP PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.510e-70
Identity = 126/165 (76.36%), Postives = 148/165 (89.70%), Query Frame = -3
Query:  189 NGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASVR----PPYYFLSVLTRTADGDEGGKHQLITATVKGGKLYICKAQAGDKRWFKGARKYVESTASSFSVA 671
            NGDGF++ +P+KWNPS+E E+PGQVLRYEDNFD+ SN++V++TPTDKKSITDYGSPEEFLS+V+YLLGKQAY G+T+ EGGFD +AVATANILE +++     PYY+LSVLTRTAD DEGGKHQLITATV GGKLYICKAQAGDKRWFKGA K+VE  A+SFSVA
Sbjct:   53 NGDGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETACEGGFDNNAVATANILETNIQDVGGKPYYYLSVLTRTADEDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGANKFVEKAATSFSVA 217          
BLAST of CX671593 vs. ExPASy Swiss-Prot
Match: PSBP_NARPS (Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus GN=PSBP PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 1.846e-68
Identity = 128/164 (78.05%), Postives = 139/164 (84.76%), Query Frame = -3
Query:  189 GDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASV----RPPYYFLSVLTRTADGDEGGKHQLITATVKGGKLYICKAQAGDKRWFKGARKYVESTASSFSVA 668
            GDGFK+ IPSKWNPSKE EFPGQVLRYEDNFD+ SNV V++ PTDKKSI DYGSPE+FLS+VDYLLGKQAY GKT SEGGF+P+AV TANILE S        YY + VLTRTADGDEGGKH LITATV  GKLYICKAQAGDKRWFKGA+K+VES ASSFS A
Sbjct:  102 GDGFKILIPSKWNPSKEVEFPGQVLRYEDNFDTTSNVGVMVNPTDKKSIKDYGSPEQFLSQVDYLLGKQAYFGKTISEGGFEPNAVRTANILETSTPVVGGKDYYSIHVLTRTADGDEGGKHLLITATVSDGKLYICKAQAGDKRWFKGAKKFVESAASSFSAA 265          
BLAST of CX671593 vs. ExPASy Swiss-Prot
Match: PSBP_WHEAT (Oxygen-evolving enhancer protein 2, chloroplastic OS=Triticum aestivum GN=PSBP PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.013e-66
Identity = 124/166 (74.70%), Postives = 143/166 (86.14%), Query Frame = -3
Query:  189 YNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASV----RPPYYFLSVLTRTADGDEGGKHQLITATVKGGKLYICKAQAGDKRWFKGARKYVESTASSFSVA 674
            Y+G+GFKL IP+KWNPSKEREFPGQVLRYEDNFD+ SN+SVII PT KK+ITDYGSPEEFLS+V +LLG+Q+Y GKT SEGGF+ DAVATAN+LE+S        YY ++VLTRTADGDEGGKHQLITATV  GKLY+CKAQ  DKRWFKGA+K+VE+ A SFSVA
Sbjct:   94 YSGEGFKLMIPAKWNPSKEREFPGQVLRYEDNFDATSNLSVIINPTTKKTITDYGSPEEFLSQVGFLLGQQSYGGKTDSEGGFESDAVATANVLESSAPVVDGKQYYSITVLTRTADGDEGGKHQLITATVADGKLYVCKAQR-DKRWFKGAKKFVENAAGSFSVA 258          
BLAST of CX671593 vs. ExPASy Swiss-Prot
Match: PSBP2_ARATH (Putative oxygen-evolving enhancer protein 2-2 OS=Arabidopsis thaliana GN=PSBP2 PE=5 SV=3)

HSP 1 Score: 203.371 bits (516), Expect = 9.205e-52
Identity = 101/125 (80.80%), Postives = 113/125 (90.40%), Query Frame = -3
Query:  189 IITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASVRP----PYYFLSVLTRTADGDEGGKHQLITATVKGGKLYICKAQAGDKRWFKGARKYVESTASSFSVA 551
            +ITPTDKKSITDYGSPE+FLS+V+YLLGKQAY G+T+SEGGFD +AVATANILE S +      YY+LSVLTRTADGDEGGKHQLITATV GGKLYICKAQAGDKRWFKGARK+VE+ A+SFSVA
Sbjct:    1 MITPTDKKSITDYGSPEQFLSQVNYLLGKQAYVGETASEGGFDANAVATANILETSTQEIGGKEYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGARKFVENAATSFSVA 125          
BLAST of CX671593 vs. ExPASy Swiss-Prot
Match: PSBP_CHLRE (Oxygen-evolving enhancer protein 2, chloroplastic OS=Chlamydomonas reinhardtii GN=PSBP PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.125e-49
Identity = 98/168 (58.33%), Postives = 120/168 (71.43%), Query Frame = -3
Query:  192 PYNGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDSNSNVSVIITPTDKKSITDYGSPEEFLSKVDYLLGKQAYSGKTSSEGGFDPDAVATANILEASVR-----PPYYFLSVLTRTADGDEGGKHQLITATV-KGGKLYICKAQAGDKRWFKGARKYVESTASSFSV 677
            PY GDGF L +P+KWNPSKE +FPG +LRYEDNFD+ +N+ VI   TDKK+I D+GS ++FL  V YLLGKQAYSG+T SEGGF P+ V+ A++L+ S         YY   +L R+ADGDEGG+HQLI ATV    KLYI K Q GDKRWFKGA+K       SF+V
Sbjct:   77 PYAGDGFALLLPAKWNPSKENDFPGVILRYEDNFDAVNNLVVIAQDTDKKAIADFGSQDKFLESVSYLLGKQAYSGETQSEGGFAPNRVSAASLLDVSTTTDKKGKTYYKYELLVRSADGDEGGRHQLIGATVGSDNKLYIIKIQIGDKRWFKGAKKEAMGAFDSFTV 244          
The following BLAST results are available for this feature:
BLAST of CX671593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
PSBP3_TOBAC3.043e-7177.11Oxygen-evolving enhancer protein 2-3, chloroplasti... [more]
PSBP_BRAJU1.510e-7076.36Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_NARPS1.846e-6878.05Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_WHEAT1.013e-6674.70Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP2_ARATH9.205e-5280.80Putative oxygen-evolving enhancer protein 2-2 OS=A... [more]
PSBP_CHLRE1.125e-4958.33Oxygen-evolving enhancer protein 2, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12A07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12A07-B14-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671593 ID=CX671593; Name=CX671593; organism=Citrus sinensis; type=EST; length=679bp
TTTTTTTTTTTTTTTTTATACAAGAGGGCCCTTATATGCCATTAAATACT
CAAATATCCACAAGCTTTTTCCAACCAACTCCTTCAATTAGAAACTCAGA
AGCTTTTGGGGAAAGATGGGAGTAGATAATTCAAAACAAACAGCATACAT
TAAGTTGGATTTACATAAAAATTCTGATTAATGTCTCAAGCAACACTGAA
AGAACTGGCAGTGCTTTCCACATACTTTCTTGCTCCCTTAAACCACCTCT
TGTCTCCAGCTTGTGCCTTGCAGATGTAAAGCTTGCCACCTTTAACCGTG
GCTGTAATTAGTTGATGCTTGCCACCTTCATCTCCATCAGCAGTTCTTGT
TAATACAGACAAGAAGTAGTATGGTGGTCGGACTGAAGCCTCCAAGATGT
TAGCTGTTGCCACAGCATCAGGGTCGAAACCACCCTCAGACGAAGTTTTG
CCGGAATAGGCTTGTTTTCCCAGCAAGTAGTCCACCTTACTGAGGAATTC
CTCGGGGGAACCGTAGTCAGTGATGGATTTCTTGTCAGTTGGGGTGATTA
TGACGGAGACATTGCTGTTGGAATCGAAGTTGTCTTCGTATCTAAGAACC
TGACCCGGGAACTCTCTCTCTTTGCTGGGGTTCCATTTTGAGGGAATCGA
CAGCTTGAATCCATCTCCATTGTATGGCA
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