EG358272

Overview
NameEG358272
Unique NameEG358272
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EG358272 vs. ExPASy Swiss-Prot
Match: SUCC_BACC7 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus cereus (strain AH187) GN=sucC PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.766e-62
Identity = 122/231 (52.81%), Postives = 159/231 (68.83%), Query Frame = 3 
Query:    9 IMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEDQVVEAFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVALK 701
            ++LDR T+  +++   +GGT IE++AEK P  I K  ID   G+    A ++   +         A++ +  LY+ F E DC++ EINPL  T   +++A DAKLNFD NA +R K+I  LRD  +ED +E+ A+K DLNYI LDG IGCMVNGAGLAMATMDIIK + G PANFLDVGG A+ ++V EAFKI+ SD+ VK I VNIFGGIMKCDVIA G++ A KQV L+
Sbjct:  112 LVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDILELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLE 342
[Close]
BLAST of EG358272 vs. ExPASy Swiss-Prot
Match: SUCC_BACC3 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus cereus (strain 03BB102) GN=sucC PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.766e-62
Identity = 122/231 (52.81%), Postives = 159/231 (68.83%), Query Frame = 3 
Query:    9 IMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEDQVVEAFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVALK 701
            ++LDR T+  +++   +GGT IE++AEK P  I K  ID   G+    A ++   +         A++ +  LY+ F E DC++ EINPL  T   +++A DAKLNFD NA +R K+I  LRD  +ED +E+ A+K DLNYI LDG IGCMVNGAGLAMATMDIIK + G PANFLDVGG A+ ++V EAFKI+ SD+ VK I VNIFGGIMKCDVIA G++ A KQV L+
Sbjct:  112 LVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDILELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLE 342
[Close]
BLAST of EG358272 vs. ExPASy Swiss-Prot
Match: SUCC_BACC1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus cereus (strain ATCC 10987) GN=sucC PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.766e-62
Identity = 122/231 (52.81%), Postives = 159/231 (68.83%), Query Frame = 3 
Query:    9 IMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEDQVVEAFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVALK 701
            ++LDR T+  +++   +GGT IE++AEK P  I K  ID   G+    A ++   +         A++ +  LY+ F E DC++ EINPL  T   +++A DAKLNFD NA +R K+I  LRD  +ED +E+ A+K DLNYI LDG IGCMVNGAGLAMATMDIIK + G PANFLDVGG A+ ++V EAFKI+ SD+ VK I VNIFGGIMKCDVIA G++ A KQV L+
Sbjct:  112 LVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDILELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLE 342
[Close]
BLAST of EG358272 vs. ExPASy Swiss-Prot
Match: SUCC_BACAN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus anthracis GN=sucC PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.766e-62
Identity = 122/231 (52.81%), Postives = 159/231 (68.83%), Query Frame = 3 
Query:    9 IMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEDQVVEAFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVALK 701
            ++LDR T+  +++   +GGT IE++AEK P  I K  ID   G+    A ++   +         A++ +  LY+ F E DC++ EINPL  T   +++A DAKLNFD NA +R K+I  LRD  +ED +E+ A+K DLNYI LDG IGCMVNGAGLAMATMDIIK + G PANFLDVGG A+ ++V EAFKI+ SD+ VK I VNIFGGIMKCDVIA G++ A KQV L+
Sbjct:  112 LVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDILELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLE 342
[Close]
BLAST of EG358272 vs. ExPASy Swiss-Prot
Match: SUCC_BACAH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus thuringiensis (strain Al Hakam) GN=sucC PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.766e-62
Identity = 122/231 (52.81%), Postives = 159/231 (68.83%), Query Frame = 3 
Query:    9 IMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEDQVVEAFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVALK 701
            ++LDR T+  +++   +GGT IE++AEK P  I K  ID   G+    A ++   +         A++ +  LY+ F E DC++ EINPL  T   +++A DAKLNFD NA +R K+I  LRD  +ED +E+ A+K DLNYI LDG IGCMVNGAGLAMATMDIIK + G PANFLDVGG A+ ++V EAFKI+ SD+ VK I VNIFGGIMKCDVIA G++ A KQV L+
Sbjct:  112 LVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDILELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLE 342
[Close]
BLAST of EG358272 vs. ExPASy Swiss-Prot
Match: SUCC_BACAC (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=sucC PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.766e-62
Identity = 122/231 (52.81%), Postives = 159/231 (68.83%), Query Frame = 3 
Query:    9 IMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEDQVVEAFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVALK 701
            ++LDR T+  +++   +GGT IE++AEK P  I K  ID   G+    A ++   +         A++ +  LY+ F E DC++ EINPL  T   +++A DAKLNFD NA +R K+I  LRD  +ED +E+ A+K DLNYI LDG IGCMVNGAGLAMATMDIIK + G PANFLDVGG A+ ++V EAFKI+ SD+ VK I VNIFGGIMKCDVIA G++ A KQV L+
Sbjct:  112 LVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDILELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLE 342
[Close]
BLAST of EG358272 vs. ExPASy Swiss-Prot
Match: SUCC_BACAA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus anthracis (strain A0248) GN=sucC PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.766e-62
Identity = 122/231 (52.81%), Postives = 159/231 (68.83%), Query Frame = 3 
Query:    9 IMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEDQVVEAFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVALK 701
            ++LDR T+  +++   +GGT IE++AEK P  I K  ID   G+    A ++   +         A++ +  LY+ F E DC++ EINPL  T   +++A DAKLNFD NA +R K+I  LRD  +ED +E+ A+K DLNYI LDG IGCMVNGAGLAMATMDIIK + G PANFLDVGG A+ ++V EAFKI+ SD+ VK I VNIFGGIMKCDVIA G++ A KQV L+
Sbjct:  112 LVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDILELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLE 342
[Close]
BLAST of EG358272 vs. ExPASy Swiss-Prot
Match: SUCC_RHIME (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhizobium meliloti GN=sucC PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.613e-62
Identity = 123/232 (53.02%), Postives = 160/232 (68.97%), Query Frame = 3 
Query:    6 AIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEDQVVEAFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVALK 701
            +I++DR       +  ++GG  IE +AE  P  IV V ID   G+T E+   + D L  +   R DA +    LYK F E D +LLE+NPL   +  ++   DAK++FD NA FR +++ ALRD T+ED +E+ A+K DL Y+ LDG IGCMVNGAGLAMATMDIIKL+G  PANFLDVGG AS+++V +AFKI+T+D  VK ILVNIFGGIMKCDVIA G++ A K+V LK
Sbjct:  121 SILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPEKGVTAENLKTLADALKLEGEARADAEKLFPILYKAFVEKDMSLLEVNPLIVMTNGRMRVLDAKVSFDGNALFRHEDVVALRDTTEEDDKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVTQAFKIITADPAVKGILVNIFGGIMKCDVIAEGVLAAVKEVGLK 352
[Close]
BLAST of EG358272 vs. ExPASy Swiss-Prot
Match: SUCC_BARQU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella quintana GN=sucC PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.613e-62
Identity = 120/232 (51.72%), Postives = 157/232 (67.67%), Query Frame = 3 
Query:    6 AIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEDQVVEAFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVALK 701
            ++++DR       +   +GG  IE +AE+ P  I+ +P+D   G+T  D  ++ D L      R D  +    LYK FCE D +LLEINPL       L   DAK++FD+NA FR  +I  LRD ++EDP+E+ A+K DL Y+ L+G IGCMVNGAGLAMATMDIIKL+G  PANFLDVGG AS+++V  AFKI+T+D  VK ILVNIFGGIM+CDVIA G+V A ++V LK
Sbjct:  121 SLLVDRAVGRVAFVVSMEGGMDIETVAEETPEKILTLPVDPVQGVTSADCKRLCDALELHDNARKDGEKLFPILYKAFCEKDMSLLEINPLIVMKDGHLRVLDAKISFDNNALFRHPDILELRDLSEEDPKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLK 352
[Close]
BLAST of EG358272 vs. ExPASy Swiss-Prot
Match: SUCC_BACCR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=sucC PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.613e-62
Identity = 122/231 (52.81%), Postives = 159/231 (68.83%), Query Frame = 3 
Query:    9 IMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEDQVVEAFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVALK 701
            ++LDR T+  +++   +GGT IE++AEK P  I K  ID   G+    A ++   +         A++ +  LY+ F E DC++ EINPL  T   +++A DAKLNFD NA +R K+I  LRD  +ED +E+ A+K DLNYI LDG IGCMVNGAGLAMATMDIIK + G PANFLDVGG A+ ++V EAFKI+ SD+ VK I VNIFGGIMKCDVIA G++ A KQV L+
Sbjct:  112 LVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGEGKVMALDAKLNFDSNALYRHKDILELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLE 342
The following BLAST results are available for this feature:
BLAST of EG358272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SUCC_BACC72.766e-6252.81Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_BACC32.766e-6252.81Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_BACC12.766e-6252.81Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_BACAN2.766e-6252.81Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_BACAH2.766e-6252.81Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_BACAC2.766e-6252.81Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_BACAA2.766e-6252.81Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_RHIME3.613e-6253.02Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_BARQU3.613e-6251.72Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_BACCR3.613e-6252.81Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]

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Properties
Property NameValue
Genbank description12d8 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0012d8, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358272 ID=EG358272; Name=EG358272; organism=Citrus sinensis; type=EST; length=702bp
ACTTTGCTATCATGTTGGATCGTAAAACTGCTGGCCCTATAATAATTGGT
TGCAGCAAGGGAGGAACCAGCATTGAAGACCTTGCTGAGAAATATCCTAA
CATGATTGTTAAGGTGCCTATTGATGTTTTCAATGGAATCACTGATGAAG
ATGCTGCTAAGGTTGTTGATGGTTTGGCGCCCAAGGTTGCTGATAGAAAT
GATGCAATTGAACAAGTGAAGAAACTGTATAAACTCTTTTGTGAGAGTGA
CTGCACATTATTGGAAATCAATCCTCTAGCAGAGACTTCTGGTAAGCAGT
TGGTGGCTGCTGATGCTAAGTTGAATTTTGATGATAATGCTGCCTTCCGT
CAGAAAGAGATATTTGCTCTTCGTGACCCAACGCAAGAGGATCCTCGAGA
GGTGGCTGCTGCCAAAGCTGATTTAAATTACATTGGCTTGGATGGAGAAA
TTGGTTGCATGGTGAATGGTGCAGGATTAGCTATGGCTACAATGGATATA
ATCAAATTACATGGTGGAACTCCTGCCAATTTCCTGGATGTTGGTGGTAA
TGCTTCTGAGGACCAGGTGGTTGAGGCATTTAAAATTTTGACTTCTGATG
AGAAAGTCAAAGCAATCTTGGTGAACATATTTGGAGGAATCATGAAATGT
GATGTAATAGCCAGTGGAATTGTCAATGCTGCTAAACAAGTTGCACTCAA
AG
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