EG358272

Overview
NameEG358272
Unique NameEG358272
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EG358272 vs. ExPASy Swiss-Prot
Match: SUCC_STAAN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus aureus (strain N315) GN=sucC PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.163e-62
Identity = 120/229 (52.40%), Postives = 156/229 (68.12%), Query Frame = 3 
Query:   12 MLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEDQVVEAFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVAL 698
            ++DR T    ++   +GGT IE++A K P  I K  ID   G++   A ++   +       N A + +  LY +F E DC+++EINPL  T+   ++A DAK+NFDDNA FR K++  LRD  +EDP+E+ A+K DL+YI LDG+IGCMVNGAGLAMATMD I   GG PANFLD GG+A+ ++V EAFKI+  DE VK I VNIFGGIMKCDVIA GIV A K+V L
Sbjct:  113 VIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHKDVVELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAGGSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDL 341
[Close]
BLAST of EG358272 vs. ExPASy Swiss-Prot
Match: SUCC_STAAM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=sucC PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.163e-62
Identity = 120/229 (52.40%), Postives = 156/229 (68.12%), Query Frame = 3 
Query:   12 MLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEDQVVEAFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVAL 698
            ++DR T    ++   +GGT IE++A K P  I K  ID   G++   A ++   +       N A + +  LY +F E DC+++EINPL  T+   ++A DAK+NFDDNA FR K++  LRD  +EDP+E+ A+K DL+YI LDG+IGCMVNGAGLAMATMD I   GG PANFLD GG+A+ ++V EAFKI+  DE VK I VNIFGGIMKCDVIA GIV A K+V L
Sbjct:  113 VIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHKDVVELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAGGSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDL 341
[Close]
BLAST of EG358272 vs. ExPASy Swiss-Prot
Match: SUCC_STAAE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus aureus (strain Newman) GN=sucC PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.163e-62
Identity = 120/229 (52.40%), Postives = 156/229 (68.12%), Query Frame = 3 
Query:   12 MLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEDQVVEAFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVAL 698
            ++DR T    ++   +GGT IE++A K P  I K  ID   G++   A ++   +       N A + +  LY +F E DC+++EINPL  T+   ++A DAK+NFDDNA FR K++  LRD  +EDP+E+ A+K DL+YI LDG+IGCMVNGAGLAMATMD I   GG PANFLD GG+A+ ++V EAFKI+  DE VK I VNIFGGIMKCDVIA GIV A K+V L
Sbjct:  113 VIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHKDVVELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAGGSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDL 341
[Close]
BLAST of EG358272 vs. ExPASy Swiss-Prot
Match: SUCC_STAAC (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus aureus (strain COL) GN=sucC PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.163e-62
Identity = 120/229 (52.40%), Postives = 156/229 (68.12%), Query Frame = 3 
Query:   12 MLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEDQVVEAFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVAL 698
            ++DR T    ++   +GGT IE++A K P  I K  ID   G++   A ++   +       N A + +  LY +F E DC+++EINPL  T+   ++A DAK+NFDDNA FR K++  LRD  +EDP+E+ A+K DL+YI LDG+IGCMVNGAGLAMATMD I   GG PANFLD GG+A+ ++V EAFKI+  DE VK I VNIFGGIMKCDVIA GIV A K+V L
Sbjct:  113 VIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHKDVVELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAGGSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDL 341
[Close]
BLAST of EG358272 vs. ExPASy Swiss-Prot
Match: SUCC_STAA9 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus aureus (strain JH9) GN=sucC PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.163e-62
Identity = 120/229 (52.40%), Postives = 156/229 (68.12%), Query Frame = 3 
Query:   12 MLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEDQVVEAFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVAL 698
            ++DR T    ++   +GGT IE++A K P  I K  ID   G++   A ++   +       N A + +  LY +F E DC+++EINPL  T+   ++A DAK+NFDDNA FR K++  LRD  +EDP+E+ A+K DL+YI LDG+IGCMVNGAGLAMATMD I   GG PANFLD GG+A+ ++V EAFKI+  DE VK I VNIFGGIMKCDVIA GIV A K+V L
Sbjct:  113 VIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHKDVVELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAGGSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDL 341
[Close]
BLAST of EG358272 vs. ExPASy Swiss-Prot
Match: SUCC_STAA8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus aureus (strain NCTC 8325) GN=sucC PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.163e-62
Identity = 120/229 (52.40%), Postives = 156/229 (68.12%), Query Frame = 3 
Query:   12 MLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEDQVVEAFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVAL 698
            ++DR T    ++   +GGT IE++A K P  I K  ID   G++   A ++   +       N A + +  LY +F E DC+++EINPL  T+   ++A DAK+NFDDNA FR K++  LRD  +EDP+E+ A+K DL+YI LDG+IGCMVNGAGLAMATMD I   GG PANFLD GG+A+ ++V EAFKI+  DE VK I VNIFGGIMKCDVIA GIV A K+V L
Sbjct:  113 VIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHKDVVELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAGGSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDL 341
[Close]
BLAST of EG358272 vs. ExPASy Swiss-Prot
Match: SUCC_STAA3 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus aureus (strain USA300) GN=sucC PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.163e-62
Identity = 120/229 (52.40%), Postives = 156/229 (68.12%), Query Frame = 3 
Query:   12 MLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEDQVVEAFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVAL 698
            ++DR T    ++   +GGT IE++A K P  I K  ID   G++   A ++   +       N A + +  LY +F E DC+++EINPL  T+   ++A DAK+NFDDNA FR K++  LRD  +EDP+E+ A+K DL+YI LDG+IGCMVNGAGLAMATMD I   GG PANFLD GG+A+ ++V EAFKI+  DE VK I VNIFGGIMKCDVIA GIV A K+V L
Sbjct:  113 VIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHKDVVELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAGGSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDL 341
[Close]
BLAST of EG358272 vs. ExPASy Swiss-Prot
Match: SUCC_STAA2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus aureus (strain JH1) GN=sucC PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.163e-62
Identity = 120/229 (52.40%), Postives = 156/229 (68.12%), Query Frame = 3 
Query:   12 MLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEDQVVEAFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVAL 698
            ++DR T    ++   +GGT IE++A K P  I K  ID   G++   A ++   +       N A + +  LY +F E DC+++EINPL  T+   ++A DAK+NFDDNA FR K++  LRD  +EDP+E+ A+K DL+YI LDG+IGCMVNGAGLAMATMD I   GG PANFLD GG+A+ ++V EAFKI+  DE VK I VNIFGGIMKCDVIA GIV A K+V L
Sbjct:  113 VIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHKDVVELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAGGSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDL 341
[Close]
BLAST of EG358272 vs. ExPASy Swiss-Prot
Match: SUCC_STAA1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=sucC PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.163e-62
Identity = 120/229 (52.40%), Postives = 156/229 (68.12%), Query Frame = 3 
Query:   12 MLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEDQVVEAFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVAL 698
            ++DR T    ++   +GGT IE++A K P  I K  ID   G++   A ++   +       N A + +  LY +F E DC+++EINPL  T+   ++A DAK+NFDDNA FR K++  LRD  +EDP+E+ A+K DL+YI LDG+IGCMVNGAGLAMATMD I   GG PANFLD GG+A+ ++V EAFKI+  DE VK I VNIFGGIMKCDVIA GIV A K+V L
Sbjct:  113 VIDRATDQVTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHKDVVELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAGGSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDL 341
[Close]
BLAST of EG358272 vs. ExPASy Swiss-Prot
Match: SUCC_SINMW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Sinorhizobium medicae (strain WSM419) GN=sucC PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.163e-62
Identity = 122/232 (52.59%), Postives = 159/232 (68.53%), Query Frame = 3 
Query:    6 AIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEDQVVEAFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVALK 701
            +I++DR       +  ++GG  IE +AE  P  IV V ID   G+T +D   + + L      R DA +    LYK F E D +LLE+NPL   +  ++   DAK++FD NA FR +++ ALRD T+ED +E+ A+K DL Y+ LDG IGCMVNGAGLAMATMDIIKL+G  PANFLDVGG AS+++V +AFKI+T+D  VK ILVNIFGGIMKCDVIA G++ A K+V LK
Sbjct:  121 SILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPDKGVTADDLKTLTEALKLDGEARADAEKLFPILYKAFVEKDMSLLEVNPLIVMTNGRMRVLDAKVSFDGNALFRHEDVVALRDTTEEDEKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVTQAFKIITADPAVKGILVNIFGGIMKCDVIAEGVIAAVKEVGLK 352
The following BLAST results are available for this feature:
BLAST of EG358272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SUCC_STAAN6.163e-6252.40Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_STAAM6.163e-6252.40Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_STAAE6.163e-6252.40Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_STAAC6.163e-6252.40Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_STAA96.163e-6252.40Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_STAA86.163e-6252.40Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_STAA36.163e-6252.40Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_STAA26.163e-6252.40Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_STAA16.163e-6252.40Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]
SUCC_SINMW6.163e-6252.59Succinyl-CoA ligase [ADP-forming] subunit beta OS=... [more]

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Properties
Property NameValue
Genbank description12d8 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0012d8, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358272 ID=EG358272; Name=EG358272; organism=Citrus sinensis; type=EST; length=702bp
ACTTTGCTATCATGTTGGATCGTAAAACTGCTGGCCCTATAATAATTGGT
TGCAGCAAGGGAGGAACCAGCATTGAAGACCTTGCTGAGAAATATCCTAA
CATGATTGTTAAGGTGCCTATTGATGTTTTCAATGGAATCACTGATGAAG
ATGCTGCTAAGGTTGTTGATGGTTTGGCGCCCAAGGTTGCTGATAGAAAT
GATGCAATTGAACAAGTGAAGAAACTGTATAAACTCTTTTGTGAGAGTGA
CTGCACATTATTGGAAATCAATCCTCTAGCAGAGACTTCTGGTAAGCAGT
TGGTGGCTGCTGATGCTAAGTTGAATTTTGATGATAATGCTGCCTTCCGT
CAGAAAGAGATATTTGCTCTTCGTGACCCAACGCAAGAGGATCCTCGAGA
GGTGGCTGCTGCCAAAGCTGATTTAAATTACATTGGCTTGGATGGAGAAA
TTGGTTGCATGGTGAATGGTGCAGGATTAGCTATGGCTACAATGGATATA
ATCAAATTACATGGTGGAACTCCTGCCAATTTCCTGGATGTTGGTGGTAA
TGCTTCTGAGGACCAGGTGGTTGAGGCATTTAAAATTTTGACTTCTGATG
AGAAAGTCAAAGCAATCTTGGTGAACATATTTGGAGGAATCATGAAATGT
GATGTAATAGCCAGTGGAATTGTCAATGCTGCTAAACAAGTTGCACTCAA
AG
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