EY692579

Overview
NameEY692579
Unique NameEY692579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length618
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692579 vs. ExPASy Swiss-Prot
Match: RS8_MACFA (40S ribosomal protein S8 OS=Macaca fascicularis GN=RPS8 PE=2 SV=3)

HSP 1 Score: 160.614 bits (405), Expect = 5.705e-39
Identity = 85/184 (46.20%), Postives = 110/184 (59.78%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACI 617
            MGISRD+ H                 YELGR  ANTK+   + +  +RVRGGN K+RALRLD GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY  HY + +GR                          S  + +K ++R+K+  +   +EEQF  G+LLACI
Sbjct:    1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRR-IHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGR--------KKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACI 175          
BLAST of EY692579 vs. ExPASy Swiss-Prot
Match: RS8_HUMAN (40S ribosomal protein S8 OS=Homo sapiens GN=RPS8 PE=1 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 5.705e-39
Identity = 85/184 (46.20%), Postives = 110/184 (59.78%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACI 617
            MGISRD+ H                 YELGR  ANTK+   + +  +RVRGGN K+RALRLD GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY  HY + +GR                          S  + +K ++R+K+  +   +EEQF  G+LLACI
Sbjct:    1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRR-IHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGR--------KKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACI 175          
BLAST of EY692579 vs. ExPASy Swiss-Prot
Match: RS8_BOVIN (40S ribosomal protein S8 OS=Bos taurus GN=RPS8 PE=2 SV=3)

HSP 1 Score: 160.614 bits (405), Expect = 5.705e-39
Identity = 85/184 (46.20%), Postives = 110/184 (59.78%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACI 617
            MGISRD+ H                 YELGR  ANTK+   + +  +RVRGGN K+RALRLD GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ IV +D+ P++QWY  HY + +GR                          S  + +K ++R+K+  +   +EEQF  G+LLACI
Sbjct:    1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRR-IHTVRVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGR--------KKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACI 175          
BLAST of EY692579 vs. ExPASy Swiss-Prot
Match: RS8_DROME (40S ribosomal protein S8 OS=Drosophila melanogaster GN=RpS8 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.660e-38
Identity = 88/184 (47.83%), Postives = 111/184 (60.33%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACI 617
            MGISRDS H                 +ELGR  ANTKL S + V ++R RGGN K RALRL+TGN++W SE V RKTRI DVVYNASNNELVRT+TLVK++IV +DA PF+QWY  HY + +GR                          S  V++K  +RQK   ++  +E+QF +GR+LACI
Sbjct:    1 MGISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGR-VHKVRTRGGNTKLRALRLETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGR------KRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALEDQFTSGRILACI 177          
BLAST of EY692579 vs. ExPASy Swiss-Prot
Match: RS8_CAEEL (40S ribosomal protein S8 OS=Caenorhabditis elegans GN=rps-8 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.660e-38
Identity = 87/184 (47.28%), Postives = 110/184 (59.78%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACI 617
            MGISRDS H                 +ELGR  ANTK+ +++ VR +R RGGN K+RALRLD+GN+SW SE  TRKTRI+D +YNA+NNELVRT+TLVK AI+ VDAAPF+QWY  HY + + R                          S+H ++K  +RQK   +D  + EQF  GRLLA I
Sbjct:    1 MGISRDSWHKRYKTGATQPVPHKKRKFELGRPAANTKIGAHR-VRLVRTRGGNEKYRALRLDSGNFSWASEQTTRKTRIVDTMYNATNNELVRTKTLVKGAIISVDAAPFRQWYEAHYALPLAR--------KKNAKLSEEDNAILNKKRSHHTMKKYTERQKTAAVDALLIEQFNTGRLLARI 175          
BLAST of EY692579 vs. ExPASy Swiss-Prot
Match: RS8_XENLA (40S ribosomal protein S8 OS=Xenopus laevis GN=rps8 PE=2 SV=3)

HSP 1 Score: 158.688 bits (400), Expect = 2.168e-38
Identity = 86/184 (46.74%), Postives = 108/184 (58.70%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACI 617
            MGISRD+ H                 YE GR  ANTK+   + +  +RVRGGN K+RALRLD GN+SWGSE  TRKTRI+DVVYNASNNELVRT+TLVK+ I+ VD+ PF+QW+  HY + +GR                          S    +K E+R+K   + P +EEQF  G+LLACI
Sbjct:    1 MGISRDNWHKRRKTGGKRKPYHKKRKYEPGRPAANTKIGPRR-IHTVRVRGGNKKYRALRLDAGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCILLVDSTPFRQWFEAHYALPLGR--------KKGAKLTPEEEEILNKKRSKKTQKKYEERKKTAKISPLLEEQFQQGKLLACI 175          
BLAST of EY692579 vs. ExPASy Swiss-Prot
Match: RS8_SPOFR (40S ribosomal protein S8 OS=Spodoptera frugiperda GN=RpS8 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.168e-38
Identity = 89/184 (48.37%), Postives = 107/184 (58.15%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACI 617
            MGISRD  H                 YELGR  ANTKL   + +  +R RGGN K+RALRLDTGN+SWGSE  TRK+RI+DVVYNASNNELVRT+TLVK+AIV VDA PF+QWY  HY + +GR                          S    +K   RQ+   ++  +EEQF  GRLLAC+
Sbjct:    1 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQR-IHLVRSRGGNTKYRALRLDTGNFSWGSECSTRKSRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGR--------KKGAKLTEAEDAIINKKRSQKTAKKYLARQRLSKVESALEEQFHTGRLLACV 175          
BLAST of EY692579 vs. ExPASy Swiss-Prot
Match: RS8_DICDI (40S ribosomal protein S8 OS=Dictyostelium discoideum GN=rps8 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.832e-38
Identity = 90/187 (48.13%), Postives = 109/187 (58.29%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSN---KTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACI 617
            MGISRD++H                 YELGRQ A TK+ S    K VR IRVRGG+ K+RALRLDTGN+SW +E +TRK RIL+VVYNA++N+LVRT TLVK +IVQ+DA P+KQWY  HYGV +G+                          S  ++ KL  R K R LD  IE Q G GR  A I
Sbjct:    1 MGISRDALHKHRLTGAARKCNYKKRKYELGRQAAKTKICSQGEEKRVRSIRVRGGHQKFRALRLDTGNFSWATEKITRKCRILNVVYNATSNDLVRTNTLVKGSIVQIDATPYKQWYETHYGVVVGK----------KKSAKKDGEAEQVVKKSASLLAKLASRAKGRVLDSAIESQIGEGRFFARI 177          
BLAST of EY692579 vs. ExPASy Swiss-Prot
Match: RS8B_SCHPO (40S ribosomal protein S8-B OS=Schizosaccharomyces pombe GN=rps8b PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 8.239e-38
Identity = 86/184 (46.74%), Postives = 107/184 (58.15%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACI 617
            MGI+RDS H                 +ELGRQP+NT++   K +  +RVRGGN K+RALRLD+GN+SWGSE V++KTRI+ V Y+ SNNELVRT TL KSAIVQ+DAAPF+ WY  HYG+ +G                           S HV RK   R  D  +D  +E QF AGRL A +
Sbjct:    1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGP-KRIHEVRVRGGNKKFRALRLDSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGILMG--------------SKGKKATATPTPKSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVV 169          
BLAST of EY692579 vs. ExPASy Swiss-Prot
Match: RS8A_SCHPO (40S ribosomal protein S8-A OS=Schizosaccharomyces pombe GN=rps8a PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 8.239e-38
Identity = 86/184 (46.74%), Postives = 107/184 (58.15%), Query Frame = 3
Query:   66 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRXXXXXXXXXXXXXXXXXXXXXXXXXXSNHVVRKLEKRQKDRTLDPHIEEQFGAGRLLACI 617
            MGI+RDS H                 +ELGRQP+NT++   K +  +RVRGGN K+RALRLD+GN+SWGSE V++KTRI+ V Y+ SNNELVRT TL KSAIVQ+DAAPF+ WY  HYG+ +G                           S HV RK   R  D  +D  +E QF AGRL A +
Sbjct:    1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGP-KRIHEVRVRGGNKKFRALRLDSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGILMG--------------SKGKKATSTPNPKSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVV 169          
The following BLAST results are available for this feature:
BLAST of EY692579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
RS8_MACFA5.705e-3946.2040S ribosomal protein S8 OS=Macaca fascicularis GN... [more]
RS8_HUMAN5.705e-3946.2040S ribosomal protein S8 OS=Homo sapiens GN=RPS8 P... [more]
RS8_BOVIN5.705e-3946.2040S ribosomal protein S8 OS=Bos taurus GN=RPS8 PE=... [more]
RS8_DROME1.660e-3847.8340S ribosomal protein S8 OS=Drosophila melanogaste... [more]
RS8_CAEEL1.660e-3847.2840S ribosomal protein S8 OS=Caenorhabditis elegans... [more]
RS8_XENLA2.168e-3846.7440S ribosomal protein S8 OS=Xenopus laevis GN=rps8... [more]
RS8_SPOFR2.168e-3848.3740S ribosomal protein S8 OS=Spodoptera frugiperda ... [more]
RS8_DICDI2.832e-3848.1340S ribosomal protein S8 OS=Dictyostelium discoide... [more]
RS8B_SCHPO8.239e-3846.7440S ribosomal protein S8-B OS=Schizosaccharomyces ... [more]
RS8A_SCHPO8.239e-3846.7440S ribosomal protein S8-A OS=Schizosaccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-002-B09-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692579 ID=EY692579; Name=EY692579; organism=Citrus sinensis; type=EST; length=618bp
TTCGTCGACCCACGCGTCCGCGTTACAGTCAGCAGCGCCGCAGCAGCAGC
TACAGCTCAACCAAGATGGGTATTTCCAGAGATTCAATGCATAAGAGGCG
CGCCACTGGTGGCAAGAAGAAAGCTTGGAGGAAGAAGCGCAAGTACGAAC
TTGGTCGTCAGCCTGCAAATACCAAGCTCTCTAGCAACAAGACTGTACGG
AGAATTCGTGTCAGAGGAGGCAATGTGAAGTGGAGGGCCCTGAGACTGGA
CACTGGGAACTATTCCTGGGGTAGCGAGGCTGTCACCCGCAAGACTCGTA
TCCTGGATGTTGTTTACAATGCCTCTAATAATGAGCTCGTCAGGACTCAA
ACTCTGGTGAAGAGTGCTATTGTGCAGGTGGATGCAGCGCCTTTTAAGCA
ATGGTACCTTCAGCACTATGGCGTTGACATTGGTAGGAAGAAGAAGGCAG
TTACCAAGAAGGAAACCACAGAGGAGGGAGAAGGTGCAGCAGCAGCAGCA
GAAGAAACTAAGAAGAGCAACCATGTTGTTAGGAAGCTTGAAAAGCGCCA
GAAGGACCGCACACTCGATCCTCACATTGAAGAGCAATTTGGTGCTGGCA
GGTTGTTGGCCTGCATTT
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