EG358270

Overview
NameEG358270
Unique NameEG358270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: ERF1_BOVIN (Eukaryotic peptide chain release factor subunit 1 OS=Bos taurus GN=ETF1 PE=2 SV=3)

HSP 1 Score: 280.796 bits (717), Expect = 5.123e-75
Identity = 141/208 (67.79%), Postives = 167/208 (80.29%), Query Frame = 2
Query:    2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYD 625
            LAGSADFKTELSQSDMFD RLQ+K+LK+VD+SYGGENGFNQAIELS E LSNVKFIQEK+LIG+YF+EISQDTGKY FG +DTLKAL+MGAV+ LIV+ENLDI RYVL    T E  I +L  EQE ++++F D  T  E E+ E   LLEWFAN Y++FG TLE VT+KSQEGSQF +GFGGIGGILRY++D +  +    D E +D
Sbjct:  226 LAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFD 433          
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: ERF1_PONAB (Eukaryotic peptide chain release factor subunit 1 OS=Pongo abelii GN=ETF1 PE=2 SV=3)

HSP 1 Score: 279.256 bits (713), Expect = 1.490e-74
Identity = 141/208 (67.79%), Postives = 166/208 (79.81%), Query Frame = 2
Query:    2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYD 625
            LAGSADFKTELSQSDMFD RLQ+K+LK+VD+SYGGENGFNQAIELS E LSNVKFIQEK+LIG+YF EISQDTGKY FG +DTLKAL+MGAV+ LIV+ENLDI RYVL    T E  I +L  EQE ++++F D  T  E E+ E   LLEWFAN Y++FG TLE VT+KSQEGSQF +GFGGIGGILRY++D +  +    D E +D
Sbjct:  226 LAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFGEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFD 433          
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: ERF1_XENTR (Eukaryotic peptide chain release factor subunit 1 OS=Xenopus tropicalis GN=etf1 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.320e-74
Identity = 139/208 (66.83%), Postives = 167/208 (80.29%), Query Frame = 2
Query:    2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYD 625
            LAGSADFKTELSQSDMFD RLQ+K+LK+VD+SYGGENGFNQAIELS E LSNVKFIQEK+LIG+YF+EISQDTGKY FG +DTLKAL+MGAV+ LIV+ENLDI RYVL+   + E    +L  EQE ++++F D  T  E E+ E   LLEWFAN Y++FG TLE VT+KSQEGSQF +GFGGIGGILRY++D +  +    D E +D
Sbjct:  226 LAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLRCNGSEEEKTLYLTPEQEKDKSHFIDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFD 433          
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: ERF1_XENLA (Eukaryotic peptide chain release factor subunit 1 OS=Xenopus laevis GN=etf1 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 7.397e-74
Identity = 139/208 (66.83%), Postives = 166/208 (79.81%), Query Frame = 2
Query:    2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYD 625
            LAGSADFKTELSQSDMFD RLQ+K+LK+VD+SYGGENGFNQAIELS E LSNVKFIQEK+LIG+YF+EISQDTGKY FG +DTLKAL+MGAV+ LIV+ENLD  RYVL+   + E    +L  EQE ++++F D  T  E E+ E   LLEWFAN Y++FG TLE VT+KSQEGSQF +GFGGIGGILRY++D +  D    D E +D
Sbjct:  226 LAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDTMRYVLRCNGSEEEKTLYLTPEQEKDKSHFIDKETGQEHELIESMPLLEWFANSYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMDYQGVDDEFFD 433          
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: ERF1_CAEEL (Eukaryotic peptide chain release factor subunit 1 OS=Caenorhabditis elegans GN=erf-1 PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 6.924e-72
Identity = 129/198 (65.15%), Postives = 165/198 (83.33%), Query Frame = 2
Query:    2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFD 595
            LAGSADFKTEL QSDMFD RLQAK++K VD++YGGENGFNQAIEL+A++L++VKFIQEK+LIG YF+EISQDTGKYVFG  DTL AL+MGA++TLI WENLDI RY +KN++ GE ++ +L  ++E ++++F DS T  ++E+ E   LLEWFAN Y+ FG  LE VT+KSQEG+QF RGFGGIGG+LRY++D+   D
Sbjct:  234 LAGSADFKTELGQSDMFDQRLQAKMIKTVDIAYGGENGFNQAIELAADTLASVKFIQEKKLIGGYFDEISQDTGKYVFGVKDTLAALEMGAIETLICWENLDIVRYKMKNSL-GEDILLNLRPDEEKDKSHFTDSETGQDMEIIETMPLLEWFANNYKNFGAALEIVTDKSQEGAQFVRGFGGIGGLLRYRVDLAHVD 430          
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: ERF1_PODAN (Eukaryotic peptide chain release factor subunit 1 OS=Podospora anserina GN=SU2 PE=3 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.014e-71
Identity = 128/209 (61.24%), Postives = 165/209 (78.95%), Query Frame = 2
Query:    2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYDD 628
            LAGSADFK +L+ SDMFD RL  K++KVVDVSYGGENGFNQAIEL++E+L NVKFIQEK+LIGKYFEEISQDTG+  +G +DTLKAL++GAV+TLIV+ENL++TR+VLK++   EI+I    ++   N++ F D  T  E+EV  + S LEW A  Y+ FG TLEFV+++S EG+QF +GFGGIGGILRY+++    +E  DD E YDD
Sbjct:  227 LAGSADFKNDLNASDMFDQRLATKVIKVVDVSYGGENGFNQAIELASETLGNVKFIQEKKLIGKYFEEISQDTGRICYGVEDTLKALELGAVETLIVFENLEVTRWVLKDSNGAEIIIHSTKQQDAANRDRFMDKETGQEMEVVSQESFLEWIAEHYKDFGTTLEFVSDRSTEGNQFVKGFGGIGGILRYKVNFEQLNEVDDDDEYYDD 435          
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: ERF1_DICDI (Eukaryotic peptide chain release factor subunit 1 OS=Dictyostelium discoideum GN=erf1 PE=2 SV=2)

HSP 1 Score: 268.085 bits (684), Expect = 3.436e-71
Identity = 131/212 (61.79%), Postives = 167/212 (78.77%), Query Frame = 2
Query:    2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSD-DGEIYDDSE 634
            LAGSADFKTEL  SDMFD RL+ KI+K+VDVSYGG+NGFNQAIELS E LS+VKFIQEK+LI ++FEEI+QDTGKY FG  DTLKALD+GA  TLIVWE+L+  RY+L+   TGE  +  LN++Q  + + F+D  +  + E+ E+  ++EWFAN Y+ FG +LEFVTNKSQEGSQFC+GFGG+GG+LRYQ+D    ++F + D   YDDS+
Sbjct:  228 LAGSADFKTELGTSDMFDQRLREKIIKIVDVSYGGDNGFNQAIELSGEVLSSVKFIQEKKLISQFFEEIAQDTGKYCFGIADTLKALDLGAAHTLIVWESLETIRYLLR-LPTGEEKVIFLNKDQNKDASVFKDKESGLDYEIVEEMPIVEWFANNYKNFGASLEFVTNKSQEGSQFCKGFGGLGGLLRYQVDFAQLNDFDNPDENEYDDSD 438          
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: ERF1_CRYHO (Eukaryotic peptide chain release factor subunit 1 OS=Cryptosporidium hominis GN=erf1 PE=3 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 4.347e-66
Identity = 120/203 (59.11%), Postives = 160/203 (78.82%), Query Frame = 2
Query:    2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDD 610
            LAGSADFK EL+QSD+FD RL +KILK+VDVSYGG+NGFNQAIELS+++L NVKF+QEK+LI K+F+E++QDTGKYV+G ++TL+AL+MGA++ LIVWENL+  R V+KN  TGE  +   +  ++ +++ F+D  T AEL+V E   L EW  N Y+ +G  LEFVTNKSQEG+QF +GFGG GGILRY++D + +    DD
Sbjct:  222 LAGSADFKNELAQSDIFDQRLASKILKIVDVSYGGDNGFNQAIELSSDALQNVKFVQEKKLITKFFDEVAQDTGKYVYGINETLQALEMGAIELLIVWENLETKRMVVKNPSTGEEKVFLNSPTEQHDESKFKDPETGAELDVIEILPLTEWLVNTYQNYGAQLEFVTNKSQEGNQFQKGFGGFGGILRYKVDFQDYAVVEDD 424          
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: ERF1_YEAST (Eukaryotic peptide chain release factor subunit 1 OS=Saccharomyces cerevisiae GN=SUP1 PE=1 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.309e-62
Identity = 118/212 (55.66%), Postives = 158/212 (74.53%), Query Frame = 2
Query:    2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFR-DSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYDDSE 634
            LAGSADFKT+L++S++FDPRL  K++ +VDVSYGGENGFNQAIELSAE+L+NVK++QEK+L+  YF+EISQDTGK+ +G DDTLKALD+GAV+ LIV+ENL+  RY  K+    E++      E E    +F  D AT  E++V  +  L+EW A  Y+ FG TLEF+T+KS EG+QF  GFGGIG +LRY+++     + S+D E YD+ E
Sbjct:  223 LAGSADFKTDLAKSELFDPRLACKVISIVDVSYGGENGFNQAIELSAEALANVKYVQEKKLLEAYFDEISQDTGKFCYGIDDTLKALDLGAVEKLIVFENLETIRYTFKDAEDNEVI---KFAEPEAKDKSFAIDKATGQEMDVVSEEPLIEWLAANYKNFGATLEFITDKSSEGAQFVTGFGGIGAMLRYKVNFEQLVDESED-EYYDEDE 430          
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: ERF1_BLEMU (Eukaryotic peptide chain release factor subunit 1 OS=Blepharisma musculus GN=eRF1 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.447e-61
Identity = 114/210 (54.29%), Postives = 158/210 (75.24%), Query Frame = 2
Query:    2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDD-GEIYDD 628
            +AGSA+FK  L QSD+FD RL AK+LK+VDV+YGGENGF QAIELSA++LSN+KFI+EK+++ K+FEE++QDT KY +G +DT+++L MGA++ ++++ENL+ TRYVLKN  TG     +L  EQE N +NF ++    ELE  EK  L EW  + Y +FG  LEF+T++SQEG+QF RGFGG+G  LRYQ+DM   +   ++  E +DD
Sbjct:  226 IAGSAEFKNVLVQSDLFDQRLAAKVLKIVDVAYGGENGFTQAIELSADTLSNIKFIREKKVMSKFFEEVAQDTKKYCYGVEDTMRSLIMGAIEVILLFENLNFTRYVLKNPTTGAEKTLYLTPEQEENHDNFMEN--GEELEALEKGPLPEWIVDNYMKFGAGLEFITDRSQEGAQFVRGFGGLGAFLRYQVDMAHLNAGEEELDEEWDD 433          
The following BLAST results are available for this feature:
BLAST of EG358270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
ERF1_BOVIN5.123e-7567.79Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_PONAB1.490e-7467.79Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_XENTR3.320e-7466.83Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_XENLA7.397e-7466.83Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_CAEEL6.924e-7265.15Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_PODAN2.014e-7161.24Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_DICDI3.436e-7161.79Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_CRYHO4.347e-6659.11Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_YEAST1.309e-6255.66Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_BLEMU1.447e-6154.29Eukaryotic peptide chain release factor subunit 1 ... [more]

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Properties
Property NameValue
Genbank description9d12 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl009d12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358270 ID=EG358270; Name=EG358270; organism=Citrus sinensis; type=EST; length=725bp
ACTTGCTGGATCAGCCGACTTTAAAACTGAGCTTAGTCAGTCAGATATGT
TTGATCCTCGCCTTCAGGCTAAAATTTTGAAAGTAGTAGATGTTTCTTAT
GGAGGGGAGAATGGATTTAACCAGGCAATTGAGCTATCTGCTGAAAGTCT
GTCCAATGTGAAGTTTATACAAGAGAAGCGTTTGATAGGAAAGTATTTTG
AAGAGATAAGCCAGGATACTGGGAAGTATGTTTTTGGTGCTGATGACACG
CTGAAAGCTTTGGATATGGGTGCTGTCGACACGCTAATTGTTTGGGAAAA
TTTGGACATTACTAGGTATGTCTTGAAAAATACTGTTACTGGTGAGATTG
TCATAAAACATTTGAACAGGGAGCAAGAGACCAATCAGAACAACTTTCGT
GATTCTGCCACCTCTGCTGAATTGGAGGTTCAGGAAAAGTCATCGCTGCT
TGAGTGGTTTGCAAATGAATACAGGAGGTTTGGTTGCACACTCGAGTTTG
TTACCAACAAATCACAAGAGGGATCCCAGTTTTGCAGAGGCTTTGGTGGT
ATTGGTGGAATACTCCGCTACCAGCTTGATATGAGATCATTTGATGAGTT
TTCTGATGATGGAGAAATTTATGATGATTCTGAATAGCAATCAATCAAAC
CTACCCCATTGCTGGTGCAGGATGACGACGTGAAGGGCCTGCACCAGCGC
GCGATTCGTCGCGCCAACTTTGGAG
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