EG358270

Overview
NameEG358270
Unique NameEG358270
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: ERF1_BLEAM (Eukaryotic peptide chain release factor subunit 1 OS=Blepharisma americanum GN=eRF1 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.890e-61
Identity = 116/210 (55.24%), Postives = 158/210 (75.24%), Query Frame = 2
Query:    2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDD-GEIYDD 628
            +AGSA+FK  L QSD+FD RL AK+LK+VDV+YGGENGF QAIELSA++LSN+KFI+EK+++ K+FEE++QDT KY +G +DT+K+L MGAV+ ++++ENL+ TRYVLKN  TG     +L  EQE N +NF ++    ELE  EK  L EW  + Y +FG  LEF+T++SQEG+QF RGFGG+G  LRYQ+DM   +   ++  E +DD
Sbjct:  226 IAGSAEFKNVLVQSDLFDQRLAAKVLKIVDVAYGGENGFTQAIELSADTLSNIKFIREKKVMSKFFEEVAQDTKKYCYGVEDTMKSLLMGAVEVILLFENLNFTRYVLKNPTTGIEKTLYLTPEQEENHDNFIEN--GEELEALEKGPLPEWIVDNYMKFGAGLEFITDRSQEGAQFVRGFGGLGAFLRYQVDMAHLNAGEEELDEEWDD 433          
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: ERF1_SCHPO (Eukaryotic peptide chain release factor subunit 1 OS=Schizosaccharomyces pombe GN=sup45 PE=1 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 7.940e-60
Identity = 119/214 (55.61%), Postives = 158/214 (73.83%), Query Frame = 2
Query:    2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQE--TNQNNF-RDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYDDSE 634
            LAGSADFKTEL QSD+FD RLQ++I+K VDVSYGG+ GFNQAIEL+A++LSNVK++QEK+LI ++F+EIS D+GKY FG  DT+ AL  GAV+TL+ + +LD+ RY  KN+  G  VI ++ +EQE   + N+F  D  T AE+E+     L EW A  Y+ +G  LEFV+++SQEG QF +GFGGIG ++RYQLD+   D  SD  E Y DS+
Sbjct:  223 LAGSADFKTELGQSDLFDQRLQSRIIKTVDVSYGGDAGFNQAIELAADTLSNVKYVQEKKLIQRFFDEISLDSGKYCFGVVDTMNALQEGAVETLLCFADLDMIRYEFKNS-EGNPVITYMTKEQEEKDSTNSFLLDKDTGAEMELVSSMLLSEWLAEHYKDYGANLEFVSDRSQEGMQFVKGFGGIGAVMRYQLDLSMLDPESD--EFYSDSD 433          
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: ERF1_OXYTR (Eukaryotic peptide chain release factor subunit 1 OS=Oxytricha trifallax GN=ERF1 PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 6.722e-59
Identity = 112/209 (53.59%), Postives = 151/209 (72.25%), Query Frame = 2
Query:    2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYDD 628
            LAG+A FK EL+++DM D RL   I  VVDVSYGGENG N+AI L+AE+L+NVKF+ EK+L+ K+FEEI+ DTG  VFG DDT+KAL++GAV+T++++E LDI RYVLKN V G+    +LN  Q+ +   F+D  T  +L+V  + SL EW  + Y+ +G  +EF+T+KSQEG QF +GFGGIGG LRY++D+   D   D G   DD
Sbjct:  231 LAGNAAFKNELAETDMLDKRLLPVICAVVDVSYGGENGLNEAITLAAEALTNVKFVAEKKLVSKFFEEIALDTGMIVFGVDDTMKALELGAVETVLLFEELDINRYVLKNPVKGDTKTIYLNSTQQKDSKYFKDRETGMDLDVVSEDSLAEWLCHNYQNYGAQVEFITDKSQEGFQFVKGFGGIGGFLRYKVDIE--DHHGDLGAGGDD 437          
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: ERF1_DIDNA (Eukaryotic peptide chain release factor subunit 1 OS=Didinium nasutum GN=eRF1 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.554e-58
Identity = 110/209 (52.63%), Postives = 158/209 (75.60%), Query Frame = 2
Query:    2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYDD 628
            LAGSA+FK +L +SD+FD RLQ  ++K+VD+SYGGENGFNQAIELS+++L +VKFI EK++IGK+F+EI++DTGKYVFG  DTL+A+DMG+VD LI++ENL+  R +L++     IV + L++ +  + + +++  T  E EV +   L EWF + Y+++   LE VT+KS EGSQF +GFGGIGGILRY++D   FD+  ++ E  DD
Sbjct:  228 LAGSAEFKNDLQKSDLFDLRLQPIVIKLVDISYGGENGFNQAIELSSDALKSVKFIHEKKVIGKFFDEIAKDTGKYVFGIKDTLEAMDMGSVDILIIYENLEYNRLILRD-ANDNIVNETLHKNKCPSGSKYKNETTGVEYEVLDNIPLTEWFMDNYKKYVSHLEIVTDKSSEGSQFLKGFGGIGGILRYKMD-TDFDDTENNNEWNDD 434          
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: ERF1_STYMT (Eukaryotic peptide chain release factor subunit 1 OS=Stylonychia mytilus GN=ERF1 PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.336e-58
Identity = 107/209 (51.20%), Postives = 152/209 (72.73%), Query Frame = 2
Query:    2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM-RSFDEFSDDGEIYD 625
            LAG+A FK ELS++DM D RL   I+ +VDVSYGGENG N+AI LSA++L+NVKF+ EK+L+ K+FEEIS DTG  VFG  DT+KAL++GAV+T++++E L+ITRYV+KN V G+     LN  Q+ +   F+D A+  +++V  +  L EW  + Y+ +   +EF+T+KSQEG QF +GFGGIGG LRY++DM  +  +  D G+ +D
Sbjct:  231 LAGNAGFKNELSETDMLDKRLLPIIVSIVDVSYGGENGLNEAITLSADALTNVKFVAEKKLVSKFFEEISLDTGMIVFGVQDTMKALELGAVETILLFEELEITRYVIKNPVKGDTRTLFLNPTQQKDSKYFKDQASGLDMDVISEDQLAEWLCHNYQNYXAQVEFITDKSQEGYQFVKGFGGIGGFLRYKVDMEEALGDVGDGGDDFD 439          
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: ERF1_STYLE (Eukaryotic peptide chain release factor subunit 1 OS=Stylonychia lemnae GN=ERF1 PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 7.432e-58
Identity = 106/209 (50.72%), Postives = 152/209 (72.73%), Query Frame = 2
Query:    2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMR-SFDEFSDDGEIYD 625
            LAG+A FK ELS++DM D RL   I+ +VDVSYGGENG N+AI LSA++L+NVKF+ EK+L+  +FE+IS DTG  VFG  DT+KAL++GAV+T++++E L+ITRYV+KN V G+     LN  Q+ +   F+D A+  +++V  +  L EW  + Y+ +G  +EF+T+KSQEG QF +GFGGIGG LRY++DM  +  +  D G+ +D
Sbjct:  231 LAGNAGFKNELSETDMLDKRLLPIIVSIVDVSYGGENGLNEAITLSADALTNVKFVAEKKLVSTFFEQISLDTGMIVFGVQDTMKALELGAVETILLFEELEITRYVIKNPVKGDTRTLFLNPTQQKDSKYFKDQASGLDMDVIAEDQLAEWLCHNYQNYGAQVEFITDKSQEGYQFVKGFGGIGGFLRYKVDMEDALGDVGDGGDDFD 439          
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: ERF1_DILMA (Eukaryotic peptide chain release factor subunit 1 OS=Dileptus margaritifer GN=eRF1 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.291e-57
Identity = 108/212 (50.94%), Postives = 157/212 (74.06%), Query Frame = 2
Query:    2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLK---NTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYDD 628
            LAGSADFKT+L++SD+FDPRL   ++K+VD++YGGENGFNQAIELS+++L NVKF+ EK+++G++F+EIS+DTG++VFG  DT++ L+ GAV+ L+++ENL+  R  LK   NTVT +I  K    ++  + N FRD     E E+ + + L EWF + Y++FG  LE +T+KS EG+QF +GFGGIGGILRY+++    D  ++D    DD
Sbjct:  228 LAGSADFKTDLNKSDLFDPRLSPLVIKIVDIAYGGENGFNQAIELSSDALRNVKFVHEKKIVGRFFDEISKDTGRFVFGLKDTMEGLEYGAVEVLMIFENLEHNRLSLKDNNNTVTFKIFPK----KETPSGNKFRDE-NGVEYEIIDNTPLSEWFLDNYKKFGTHLEIITDKSSEGNQFVKGFGGIGGILRYKMEQTHGDVETEDAFNEDD 434          
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: ERF1_LOXST (Eukaryotic peptide chain release factor subunit 1 OS=Loxodes striatus GN=eRF1 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 6.956e-56
Identity = 103/211 (48.82%), Postives = 150/211 (71.09%), Query Frame = 2
Query:    2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYDDSE 634
            LAG+A+FK EL+ ++  D R++AK++ ++DV+YGGENGFNQAIELS   L NVKFI+EK LI K FEE++Q++    +G  DT+KAL+MGAV+TL++WENL+   + LKN VT E     L+ +Q T +N+F+D A   EL + E+ +L EW  + Y+ +G  LEFVT++SQEGSQF +GFGGI G LRY+++    +   ++G +  D +
Sbjct:  224 LAGAAEFKNELAANEYLDQRIRAKVVTIIDVNYGGENGFNQAIELSQVQLQNVKFIKEKNLITKLFEEVAQNSITVCYGLTDTMKALEMGAVETLVIWENLEFIWFKLKNPVTKEESTVVLSPQQATEKNHFQDEANQCELNIVERFALTEWLIDNYKNYGARLEFVTDRSQEGSQFVKGFGGICGFLRYEVNFEKMEFQEEEGYLDPDED 434          
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: ERF1_TRYBB (Eukaryotic peptide chain release factor subunit 1 OS=Trypanosoma brucei brucei GN=ERF1 PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.958e-52
Identity = 105/210 (50.00%), Postives = 147/210 (70.00%), Query Frame = 2
Query:    2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRY-VLKNT-VTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLD---MRSFDEFSDDGE 616
            LAGSA+FK  L QSD+FDPRL+A ++KVVDV++ G+ G NQAI+L+A++LS VK +QEK+L+  +F++I+ DT  Y FG  DTLK L+ GAV+TLIV+E+L+I RY V+KN     E    H+  E+E  ++N     +       E+   ++W A  YR+FGC LE +TN+SQEG+QF RGFGGIGG+LRY+LD   +R  ++  DD E
Sbjct:  227 LAGSAEFKEVLYQSDLFDPRLKAIVVKVVDVAHPGDVGLNQAIDLAADALSGVKLVQEKKLLQGFFDQIACDTQLYCFGVQDTLKCLEAGAVETLIVYEDLNIYRYTVVKNRGADDEETFVHVMSEEEAKRSNIHMQESGKTRNEIEQEDFVDWLATNYRKFGCALELITNRSQEGTQFVRGFGGIGGVLRYKLDIIALRDVEKKEDDEE 436          
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: ERF1_GIALA (Eukaryotic peptide chain release factor subunit 1 OS=Giardia lamblia GN=ERF1 PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.703e-50
Identity = 99/219 (45.21%), Postives = 147/219 (67.12%), Query Frame = 2
Query:    2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEI---VIKHLNREQETNQNNFRD--SATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM---RSFDEFSDDGEIYDDSE 634
            L GSADFK  LS S +FD RLQ+ ++K +D++YGGE GFNQAIE++ ++L +VK IQE +L+ ++ E I++DT +  FG  DT++ L+M AV+ LIVW++L   R  L+  + GE    VIK+L + Q +N    R+  +    +L++     LLEWF + Y+ +G +LEF+TN+S EG+QFC GFGGIGG+LR+Q+D+     F + SD+    DD E
Sbjct:  236 LGGSADFKNVLSTSAIFDQRLQSIVMKQIDINYGGEQGFNQAIEMAGDTLKDVKLIQEVKLLTEFTENIAKDTKRVCFGITDTIRCLEMSAVEKLIVWDDLPYHRVTLQCVINGETSAPVIKYLLKSQMSNPKYLREVINGEEVQLDIMGDQLLLEWFVDNYKNYGASLEFITNRSAEGTQFCSGFGGIGGLLRWQVDLVEAARFMQESDEDSFMDDLE 454          
The following BLAST results are available for this feature:
BLAST of EG358270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
ERF1_BLEAM1.890e-6155.24Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_SCHPO7.940e-6055.61Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_OXYTR6.722e-5953.59Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_DIDNA2.554e-5852.63Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_STYMT3.336e-5851.20Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_STYLE7.432e-5850.72Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_DILMA6.291e-5750.94Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_LOXST6.956e-5648.82Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_TRYBB7.958e-5250.00Eukaryotic peptide chain release factor subunit 1 ... [more]
ERF1_GIALA5.703e-5045.21Eukaryotic peptide chain release factor subunit 1 ... [more]

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Properties
Property NameValue
Genbank description9d12 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl009d12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358270 ID=EG358270; Name=EG358270; organism=Citrus sinensis; type=EST; length=725bp
ACTTGCTGGATCAGCCGACTTTAAAACTGAGCTTAGTCAGTCAGATATGT
TTGATCCTCGCCTTCAGGCTAAAATTTTGAAAGTAGTAGATGTTTCTTAT
GGAGGGGAGAATGGATTTAACCAGGCAATTGAGCTATCTGCTGAAAGTCT
GTCCAATGTGAAGTTTATACAAGAGAAGCGTTTGATAGGAAAGTATTTTG
AAGAGATAAGCCAGGATACTGGGAAGTATGTTTTTGGTGCTGATGACACG
CTGAAAGCTTTGGATATGGGTGCTGTCGACACGCTAATTGTTTGGGAAAA
TTTGGACATTACTAGGTATGTCTTGAAAAATACTGTTACTGGTGAGATTG
TCATAAAACATTTGAACAGGGAGCAAGAGACCAATCAGAACAACTTTCGT
GATTCTGCCACCTCTGCTGAATTGGAGGTTCAGGAAAAGTCATCGCTGCT
TGAGTGGTTTGCAAATGAATACAGGAGGTTTGGTTGCACACTCGAGTTTG
TTACCAACAAATCACAAGAGGGATCCCAGTTTTGCAGAGGCTTTGGTGGT
ATTGGTGGAATACTCCGCTACCAGCTTGATATGAGATCATTTGATGAGTT
TTCTGATGATGGAGAAATTTATGATGATTCTGAATAGCAATCAATCAAAC
CTACCCCATTGCTGGTGCAGGATGACGACGTGAAGGGCCTGCACCAGCGC
GCGATTCGTCGCGCCAACTTTGGAG
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