EG358270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: ERF1_TETTH (Eukaryotic peptide chain release factor subunit 1 OS=Tetrahymena thermophila GN=ERF1 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.076e-48 Identity = 101/211 (47.87%), Postives = 136/211 (64.45%), Query Frame = 2 Query: 2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYDDSE 634 LAGS DFK ELS + MFDPRL KI+K+VDVSYGGENG NQAIEL+ ESL+NVKF+QEK +I K+F+ I+ D+G V+G DT++ L G ++ ++ +E L R KN VT +I + + N +F+D ELE E +L EW A Y FG L F+T+KS EG QF +GF GIGG LRY++D+ +D+ Y++ E Sbjct: 225 LAGSGDFKNELSTTQMFDPRLACKIIKIVDVSYGGENGLNQAIELAQESLTNVKFVQEKNVISKFFDCIAIDSGTVVYGVQDTMQLLLDGVIENILCFEELTTLRVTRKNKVTEQITHIFIPPNELNNPKHFKDG--EHELEKIEVENLTEWLAEHYSEFGAELYFITDKSAEGCQFVKGFSGIGGFLRYKVDLEHIVNPNDEYN-YEEEE 432
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: RF1_THEON (Peptide chain release factor subunit 1 OS=Thermococcus onnurineus (strain NA1) GN=prf1 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.239e-20 Identity = 60/197 (30.46%), Postives = 101/197 (51.27%), Query Frame = 2 Query: 2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANE-----YRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQL 577 + G K E D L+ K++ VVD+SY GE G + +E +++ LS + ++E++LI +F + +DTG +G + KAL++GAVDTL++ E D R K G +K ++ EQE + ++ T + S +W E G +E ++ ++EG QF + FGG+G LRY++ Sbjct: 221 IGGPGPTKEEFVDGDYLHHELRKKVIGVVDISYHGEYGLRELVEKASDILSEHEAVKERKLIQDFFRHLVKDTGLITYGEREVRKALELGAVDTLLISEGYDKVRVKAKCNACGWEELKTMS-EQEFHV--YKKKLTHCPKCGSQNISFEKWDVAEELIKLAEESGAEVEIISLDTEEGQQFYKAFGGLGAFLRYKI 414
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: RF1_PYRFU (Peptide chain release factor subunit 1 OS=Pyrococcus furiosus GN=prf1 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.619e-20 Identity = 58/194 (29.90%), Postives = 101/194 (52.06%), Query Frame = 2 Query: 2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQ-ETNQNNFRDSATSAELEVQ-EKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQL 577 + G K E + D L+ KI+ +VD+SY GE G + + +A+ L + + I+E+ L+ ++ + I +DTG +G + KAL++GAVDTL++ E D R +K G +K ++ E+ E + + + EK + E G +E ++ ++EG QF R FGG+G ILR+++ Sbjct: 224 VGGPGPTKEEFVEGDYLHHELKKKIIGIVDISYHGEYGLRELVAKAADILRDHEVIRERNLVNEFLKHIVKDTGLATYGEREVRKALELGAVDTLLISEGYDKVRVHVKCNNCGWEELKTMSEEEYEAYKKRIQTCPKCGSQNLTFEKWEVAEELIKIAEEAGSNVEIISLDTEEGQQFYRAFGGLGAILRFRI 417
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: RF1_PYRAB (Peptide chain release factor subunit 1 OS=Pyrococcus abyssi GN=prf1 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.761e-20 Identity = 58/194 (29.90%), Postives = 103/194 (53.09%), Query Frame = 2 Query: 2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQ-ETNQNNF-RDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQL 577 + G K + + D L+ KI+ VVD+SY GE G + +E +++ L + + I+EK+L+ ++ + + +DTG +G + +AL++GAVDTL++ E D R K G +K ++ E+ E + R ++ EK + E G +E ++ ++EG QF R FGG+G ILR+++ Sbjct: 224 VGGPGPTKEDFVEGDYLHHELKKKIIGVVDISYHGEYGLRELVEKASDILRDHEVIREKKLVNEFLKHVVKDTGLATYGEREVRRALEIGAVDTLLISEGYDKVRVRAKCNHCGWEELKTMSEEEFEVYKKKLTRCPKCGSQNLTIEKWDVAEELIKMAEEAGSDVEIISLDTEEGQQFYRAFGGLGAILRFKI 417
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: RF1_METS3 (Peptide chain release factor subunit 1 OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=prf1 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.761e-20 Identity = 60/195 (30.77%), Postives = 101/195 (51.79%), Query Frame = 2 Query: 2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTG---EIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQL 577 + G K E + D + ++ KI+ VD SY GE G + I+ SA+ L+++ +QEK+++ K+ E+ +D G +G + L MGAVDTL++ E+L R V K G EI +K + E ++ S L+ + +L+E F + +E ++ +++EG Q R FGG+ ILRY + Sbjct: 220 IGGPGFTKEEFVKGDYLNYEIKDKIIATVDTSYTGEFGIREVIDKSADILNDLDVMQEKKVVQKFLHELVKDKGLASYGEREVRTNLIMGAVDTLLLSEDLTAMRKVFKCPSCGNEEEITVK---SQSEADKLEKPCSNCGEILKEESSQTLIEDFVEKAEEMNSEVELISTETEEGMQLLRAFGGVAAILRYHV 411
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: RF1_PYRKO (Peptide chain release factor subunit 1 OS=Pyrococcus kodakaraensis GN=prf1 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.033e-20 Identity = 58/199 (29.15%), Postives = 103/199 (51.76%), Query Frame = 2 Query: 2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIK-------HLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQL 577 + G K E + D L+ K++ VVD+SY GE G + +E +++ L + + ++E++LI ++F+ + +DTG +G + KAL++GAVD L++ E D R K G +K H+ ++Q T+ ++ EK + E G +E ++ ++EG QF + FGG+G ILRY++ Sbjct: 221 IGGPGPTKEEFVEGDYLHHELRKKVIGVVDISYHGEYGLRELVEKASDILKDHEAVKERQLIQEFFKHLVKDTGMITYGEKEVRKALELGAVDKLLISEGYDKVRVRAKCNNCGWEELKTMSEGEFHVYKKQLTH-----CPKCGSQNITFEKWDVAEELIKMAEESGADVEIISLDTEEGQQFYKAFGGLGAILRYKI 414
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: RF1_PYRHO (Peptide chain release factor subunit 1 OS=Pyrococcus horikoshii GN=prf1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.370e-19 Identity = 59/198 (29.80%), Postives = 104/198 (52.53%), Query Frame = 2 Query: 2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSAT------SAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQL 577 + G K E + + L+ KIL VVD+SY GE G + +E +++ L + + I+EK+L+ ++ + + +DTG +G + +AL++GAVD L++ E + R +K G +K ++ E+ +R T S L + EK + E G +E ++ ++EG QF R FGG+G ILR+++ Sbjct: 224 IGGPGPTKEEFVEGEYLHHELKKKILGVVDISYHGEYGLRELVEKASDILRDHEVIREKKLVNEFLKHVVKDTGLATYGEREVRRALEIGAVDVLLISEGYNKVRVRVKCNHCGWEELKTMSEEE---YEVYRKKITKCPKCGSQNLTI-EKWDVAEELIKMAEEAGSDVEIISLDTEEGQQFYRAFGGLGAILRFKI 417
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: RF1_METMP (Peptide chain release factor subunit 1 OS=Methanococcus maripaludis GN=prf1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.370e-19 Identity = 59/197 (29.95%), Postives = 103/197 (52.28%), Query Frame = 2 Query: 2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEE-ISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNT---VTGEIVIKHLNREQETNQNNFRDSAT-SAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQL 577 L G + K E ++ D L+ KI+ D+ Y E G + ++ +++ L ++ ++EK LI ++F+E I D G +G +K L+MGA+DTLIV E++ ITR +K +T E+ +K + Q + T + + E+ ++E+ ++ L V+ ++EGSQ R F G+ ILRY+L Sbjct: 223 LGGPGNTKNEFAEKDYLHHELKKKIIDTFDLCYTEEFGIRELLDKASDLLRDIDLMKEKNLIQRFFKELIKDDGGLSAYGEAQVMKYLEMGAIDTLIVTEDIGITRVTVKCNNCDITQEVNVKTNEMFKFEEQLKTKACPTCGGAMYIDEEKDIIEYLSDLCNMHNTDLIVVSTDTEEGSQISRAFKGMAAILRYKL 419
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: RF1_THESM (Peptide chain release factor subunit 1 OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=prf1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.789e-19 Identity = 60/195 (30.77%), Postives = 100/195 (51.28%), Query Frame = 2 Query: 2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRY-VLKNTVTGEIVIKHLNREQETNQNNFR--DSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQL 577 + G K E + + L+ +IL VVD+SY GE G + +E +++ L + ++E++L+ ++F+ + +DTG +G + KAL++GAVD L++ E D R L N E + E E + N + S + V EK + E G +E ++ ++EG QF + FGGI ILRY+L Sbjct: 221 IGGPGPTKEEFVEGEYLHHELRKRILGVVDISYHGEYGLRELVEKASDILREHEAVKERKLVQQFFKHLVKDTGLITYGEKEVRKALELGAVDILLLSEGYDRVRVKALCNNCGWEELKTMTEAEFELYKKNLKACPKCNSQNISV-EKWDVAEELIKIAEEGGAEVEIISLDTEEGQQFYKAFGGIAAILRYKL 414
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: RF1_METBU (Peptide chain release factor subunit 1 OS=Methanococcoides burtonii (strain DSM 6242) GN=prf1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.789e-19 Identity = 56/200 (28.00%), Postives = 107/200 (53.50%), Query Frame = 2 Query: 2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAE----------LEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRY 571 + G + K E + F ++ K+L + DV+Y E+G ++ + ++E L ++ + EK+L+ ++F E+ D+GK +G D+ + L +GAVD L++ E+L R +K T + EQ+T++ F+ +S+ LE+ EK +++ + + G +EF++ +EGSQ + FGG+ ILR+ Sbjct: 220 IGGPSPTKEEFEAGNFFHHEIEKKVLDLFDVAYTDESGLSELVNAASERLEDLDLMVEKKLMQQFFRELVSDSGKATYGEDNVRENLIIGAVDILLISEDLRAVRETVKCT--------SCDYEQKTSR-EFKPGDSSSPTGNCPKCGSYLEITEKVDVVDQLSEICDQMGTRVEFISTDFEEGSQLLKAFGGVVAILRF 410 The following BLAST results are available for this feature:
BLAST of EG358270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >EG358270 ID=EG358270; Name=EG358270; organism=Citrus sinensis; type=EST; length=725bpback to top |