EG358270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: RF1_METVS (Peptide chain release factor subunit 1 OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=prf1 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.207e-19 Identity = 57/205 (27.80%), Postives = 103/205 (50.24%), Query Frame = 2 Query: 2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEE-ISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQN-----NFRDSA-------TSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQL 577 + G + K E ++ D L+ KI+ D+ Y E G + +E +++ L ++ ++EK LI K+F+E I D G +G ++ L+MGA+DTLIV E++++TR +K + N +QE N F D S + ++E+ ++E+ + + V+ ++EGSQ + F G+ ILRY++ Sbjct: 223 IGGPGNTKNEFAEKDFLHHELKKKIIDTFDLCYTEEFGIRELLEKASDLLRDLDLMKEKNLIQKFFKELIKDDGGLSAYGESQVMRYLEMGAIDTLIVTEDIELTRVTIK--------CNNCNFKQEINVKTRDLYKFEDEVKTKICKQCSGSMYIEEEKDIIEYLSELCNIHNSDIVVVSTDTEEGSQISKAFKGMAAILRYKI 419
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: RF1_METM7 (Peptide chain release factor subunit 1 OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=prf1 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.978e-18 Identity = 59/197 (29.95%), Postives = 101/197 (51.27%), Query Frame = 2 Query: 2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEE-ISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNT---VTGEIVIKHLNREQETNQNNFRDSAT-SAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQL 577 L G + K E ++ D L+ KI+ D+ Y E G + +E +++ L ++ ++EK LI ++F+E I D G +G +K L MGA+DTLIV E++ ITR +K T E+ +K + +Q + T + + E+ ++E+ + + V+ ++EGSQ R F G+ ILRY+L Sbjct: 223 LGGPGNTKNEFAEKDYLHHELKKKIIDTFDLCYTEEFGIRELLEKASDLLRDLDLMKEKNLIQRFFKELIKDDGGLSAYGEAQVMKYLGMGAIDTLIVTEDIGITRVTVKCNNCDYTQEVNVKTNEMFKFEDQLKTKACPTCGGAMYIDEEKDIIEYLSELCNVHNTDIIVVSTDTEEGSQISRAFKGMAAILRYKL 419
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: RF1_METM6 (Peptide chain release factor subunit 1 OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=prf1 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.408e-18 Identity = 58/197 (29.44%), Postives = 101/197 (51.27%), Query Frame = 2 Query: 2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEE-ISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNT---VTGEIVIKHLNREQETNQNNFRDSAT-SAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQL 577 L G + K E ++ D L+ KI+ D+ Y E G + ++ +++ L ++ ++EK LI ++F+E I D G +G +K L+MGA+DTLIV E++ ITR +K T E+ +K + Q + T + + E+ ++E ++ + V+ ++EGSQ R F G+ ILRY+L Sbjct: 223 LGGPGNTKNEFAEKDYLHHELKKKIIDTFDLCYTEEFGIRELLDKASDLLRDLDLMKEKNLIQRFFKELIKDDGGLSAYGEAQVMKYLEMGAIDTLIVTEDIGITRVTIKCNNCDYTQEVNVKTNEMFKFEEQLKTKACPTCGGAMYIDEEKDIIEHLSDLCNVHNTDIIVVSTDTEEGSQISRAFKGMAAILRYKL 419
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: RF1_METM5 (Peptide chain release factor subunit 1 OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=prf1 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.757e-18 Identity = 58/197 (29.44%), Postives = 100/197 (50.76%), Query Frame = 2 Query: 2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEE-ISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNT---VTGEIVIKHLNREQETNQNNFRDSAT-SAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQL 577 L G + K E ++ D L+ KI+ D+ Y E G + ++ +++ L ++ ++EK LI K+F+E I D G +G +K L+MGA+DTLIV E++ ITR +K E+ +K + Q + T + + E+ ++E ++ + V+ ++EGSQ R F G+ ILRY+L Sbjct: 223 LGGPGNTKNEFAEKDYLHHELKKKIIDTFDLCYTEEFGIRELLDKASDLLRDLDLMKEKNLIQKFFKELIKDDGGLSAYGEAQVMKYLEMGAIDTLIVTEDIGITRVTVKCNNCDYAQEVNVKTNEMFKFEEQLKTKACPTCGGAMYIDEEKDIIEHLSDLCHMHNTDIIVVSTDTEEGSQISRAFKGMAAILRYKL 419
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: RF1_METKA (Peptide chain release factor subunit 1 OS=Methanopyrus kandleri GN=prf1 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.757e-18 Identity = 54/193 (27.98%), Postives = 101/193 (52.33%), Query Frame = 2 Query: 2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEE-ISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTG-EIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQ 574 + G K E D L+ K+L VVDV E+G +A+ + E+L + ++EKRL+ K+ EE ++ + Y D+ LK MGAV+ L+V E+L+ + +L+ G E ++ +++ AEL V+E +++++ + G +E ++ +++EG+QF F G+G +LR++ Sbjct: 218 VGGPGPTKEEFLDGDYLPKDLKEKVLTVVDVGNTDESGLREALNKAEEALKEAELVREKRLVRKFMEEAVNGELAAYGEEVDELLK---MGAVEVLLVSEDLEGYKVILRCPECGYENIVTVKEKDEAKKYVEECPECGEAELNVEEIKDIVDYYVELAEQMGSNVEIISTETEEGAQFYNAFRGLGALLRFR 407
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: RF1_METTH (Peptide chain release factor subunit 1 OS=Methanobacterium thermoautotrophicum GN=prf1 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.675e-17 Identity = 52/195 (26.67%), Postives = 92/195 (47.18%), Query Frame = 2 Query: 2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSAT----SAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQ 574 L G K E D L+ K++ VD SY GE G + I+ S + LS + ++EK+L+ ++ E+ + G +G + + L MGAV+ L++ E+L R G E + D+ T + ++ + ++ +++ G +E ++ +++EG Q R FGGIG ILRY+ Sbjct: 220 LGGPGHTKEEFLNGDYLHHELKKKVITTVDTSYTGEFGIREVIDKSMDVLSEIDVMREKKLVQRFLRELINEDGLASYGEREVRQHLQMGAVEVLLLSEDLKYQR--------GTYECASCGHRMEKTGRDLPDTETCPSCNDQMRLSDRRDMIDDLVEMAEEVGTEVEIISTETEEGMQLLRAFGGIGAILRYR 406
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: RF1_ARCFU (Peptide chain release factor subunit 1 OS=Archaeoglobus fulgidus GN=prf1 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.159e-16 Identity = 52/193 (26.94%), Postives = 101/193 (52.33%), Query Frame = 2 Query: 2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLD 580 + G + K E + + LQ K+L + DV Y E+G + +E + + L V I+EK L+ ++ +E+++D G +G ++ + +++GAVDTL++ E+L R + G+ V + + + F + + E+E E+ ++ + G +EF++ +S+EG + FGGI ILR++ D Sbjct: 216 IGGPSPTKEEFYEGEYLHHELQKKVLGLFDVGYTDESGLYELVEKAKDVLQEVDIIREKNLMQRFLKEVARD-GLAAYGEEEVRRYIELGAVDTLLLSEDLRYERVKYRCPKCGKEV--EVTVREGIEKPPFCEE-DNVEMEEVERRDIVLELSELAESTGAKVEFLSTESEEGEMLYKAFGGIAAILRFKPD 404
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: RF1_METST (Peptide chain release factor subunit 1 OS=Methanosphaera stadtmanae (strain DSM 3091) GN=prf1 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.388e-16 Identity = 51/193 (26.42%), Postives = 95/193 (49.22%), Query Frame = 2 Query: 2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNF-RDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQL 577 + G K + + + KI+ +VD SY G+ G + I+ SA++L + +QEK+ + K+ + ++G +G + + L MGAV+TL++ ENL R + + + QE + + + + QE + L A E + +E ++ +++EG+Q + FGGI GILRY++ Sbjct: 221 IGGPGHTKNDFVDGEYIHYEIHDKIINIVDTSYTGDFGIREVIDESADTLDEMDIMQEKKFMRKFLTGLISESGLSTYGEKEVRQNLQMGAVETLLISENLKSKRQTYTCPACNTVDVITTRQHQEPPEKRCPKCNEVMKITKTQETAEELIELAEEVKTH---VEVISIETEEGTQLDKAFGGIAGILRYKV 410
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: RF1_HALLT (Peptide chain release factor subunit 1 OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=prf1 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.561e-15 Identity = 55/193 (28.50%), Postives = 98/193 (50.78%), Query Frame = 2 Query: 2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTG-KYVFGADDTLKALDMGAVDTLIVWENL--DITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRY 571 + G + K E D LQ K+L DV+Y E+G ++ ++E+L++ + +++KR + ++FE + TG + +G D T + L MG+VD L++ E+L D+ Y N G + ++ T + S E +V E+ ++E + + G +F++ ++G Q FGGI GILRY Sbjct: 227 VGGPSPTKDEFLDGDYLHHELQDKVLGKFDVAYTDESGLKDLVDNASEALADQEIVEDKRHMDEFFENL--HTGEEATYGFDQTRRNLIMGSVDRLLISEDLRSDVVVYECPN---GHEEYEVVDSRHSTPSHEC--SECGEEADVDEREDVIEHLMSIAEQRGTDTKFISTDFEKGEQLLDAFGGIAGILRY 412
BLAST of EG358270 vs. ExPASy Swiss-Prot
Match: RF1_METJA (Peptide chain release factor subunit 1 OS=Methanocaldococcus jannaschii GN=prf1 PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.957e-15 Identity = 53/197 (26.90%), Postives = 96/197 (48.73%), Query Frame = 2 Query: 2 LAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEE-ISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNR----EQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQL 577 + G K E + D L+ +L D+ Y E G + +E +A L +V+ ++E+ + ++ +E I +D G +G + L+AL MGAVDTLIV E L+ + + + K +N+ + E N + L + E+ +E+ + + G L V+++++EG+ F GI ILRY++ Sbjct: 223 VGGPGHTKNEFVEGDYLHHELKKIVLDTFDLCYTEEFGIRELLEKAAPLLKDVELMKEREAVQRFLKELIKEDGGLACYGEKEVLEALMMGAVDTLIVSEELEKYKVKIACNNCDYLEEKTVNKLELIKLEEELKNAQCPKCGGALSIVEEKDYIEYLSELCEQSGAKLVTVSSETEEGAMILNAFKGIAAILRYKI 419 The following BLAST results are available for this feature:
BLAST of EG358270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >EG358270 ID=EG358270; Name=EG358270; organism=Citrus sinensis; type=EST; length=725bpback to top |