EY692465

Overview
NameEY692465
Unique NameEY692465
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: SSUB2_AGRT5 (Aliphatic sulfonates import ATP-binding protein ssuB 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ssuB2 PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 9.046e-14
Identity = 42/110 (38.18%), Postives = 60/110 (54.55%), Query Frame = -3
Query:   49 VAHRVEPSGQSMSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGL 378
            +A  V  S  S   A L   G+  G+ G  VL+G  L +  G+ +SI+G SG GK  LLR++A      GG+I + G PL+     V + FQD  LLPW ++ +N+  GL
Sbjct:    1 MAKEVSLSNTSAGGAALDILGLWKGFDGTEVLKGLSLNVPAGQFLSIVGRSGCGKSTLLRLIADLETIDGGTIQIDGNPLSEISGEVRMMFQDARLLPWRTVLQNIGIGL 110          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: NRTD_SYNE7 (Nitrate transport ATP-binding protein nrtD OS=Synechococcus elongatus (strain PCC 7942) GN=nrtD PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 9.046e-14
Identity = 39/93 (41.94%), Postives = 56/93 (60.22%), Query Frame = -3
Query:    7 LEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEERR 285
            +E  +L +Q GE + ++G SG GK  LL +++GF  P  G ++L G+P+  P P   V FQ+ SLLPW S   N+A  +  AR  HLS  E+R
Sbjct:   36 IEDVNLSVQQGEFICVIGHSGCGKSTLLNLVSGFSQPTSGGVYLDGQPIQEPGPDRMVVFQNYSLLPWKSARDNIALAVKAAR-PHLSTSEQR 127          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: Y3108_BRUME (Putative ATP-binding protein BMEII0108 OS=Brucella melitensis GN=BMEII0108 PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.181e-13
Identity = 38/93 (40.86%), Postives = 55/93 (59.14%), Query Frame = -3
Query:   40 ICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGL-DFA 315
            + + YGG   L+  +L +  GE V+++GPSG GK   + +  G   P GG I +  +P+ GP P   V FQ  +L PWL++ +NV FGL DFA
Sbjct:   10 VVMRYGGFLALDRLNLDIADGEFVTVVGPSGCGKSTAMNIADGLLQPSGGGILVGDKPVTGPGPERGVIFQQYALFPWLTVRQNVEFGLTDFA 102          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB1_BURXL (Taurine import ATP-binding protein tauB 1 OS=Burkholderia xenovorans (strain LB400) GN=tauB1 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.181e-13
Identity = 45/107 (42.06%), Postives = 58/107 (54.21%), Query Frame = -3
Query:   37 SGQSMSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFAR 357
            SG  + Q  +  +G   G   +  L   DL+++PGE V  LG SG GK  LL  +AGF  P  G + L GEP+ GP     V FQ  +L+PWL +  NVA GL F R
Sbjct:    2 SGLEIRQLQVAYEG-ARGAAPHVALADVDLRIEPGEFVVALGASGCGKTTLLNCIAGFIQPTEGEVRLNGEPVLGPGADRGVVFQKYALMPWLDVLDNVALGLRFQR 107          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: SSUB2_PSEAE (Aliphatic sulfonates import ATP-binding protein ssuB 2 OS=Pseudomonas aeruginosa GN=ssuB2 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.181e-13
Identity = 44/98 (44.90%), Postives = 56/98 (57.14%), Query Frame = -3
Query:   28 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIH---LLG---EPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKAH 303
            YG   VLEG  L L PGEVVS+LGPSG GK  LLR+ AG      G++    +LG   +  NG    + V FQ+P LLPWL++ +NV F   +    H
Sbjct:   14 YGDTRVLEGVALSLAPGEVVSLLGPSGCGKSTLLRIAAGLDDDFQGTVERNPILGFGPDGENGRSGGIGVVFQEPRLLPWLTVAQNVGFADGWLEDEH 111          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: SSUB1_PSEAB (Aliphatic sulfonates import ATP-binding protein ssuB 1 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=ssuB1 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.181e-13
Identity = 44/98 (44.90%), Postives = 56/98 (57.14%), Query Frame = -3
Query:   28 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIH---LLG---EPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKAH 303
            YG   VLEG  L L PGEVVS+LGPSG GK  LLR+ AG      G++    +LG   +  NG    + V FQ+P LLPWL++ +NV F   +    H
Sbjct:   14 YGDTRVLEGVALSLAPGEVVSLLGPSGCGKSTLLRIAAGLDDDFQGTVERNPILGFGPDGENGRSGGIGVVFQEPRLLPWLTVAQNVGFADGWLEDEH 111          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_BURP1 (Taurine import ATP-binding protein tauB OS=Burkholderia pseudomallei (strain 1710b) GN=tauB PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.543e-13
Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = -3
Query:   49 AVLHAQGICLGY----GGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGL 336
            A L AQ + + Y    G  + LE   + +  GE+V  LG SG GK  LL +LAGF  P  G + + G P+ GP     V FQD +L+PWL++ +NVAFGL
Sbjct:    2 AKLCAQQVSVVYASRRGALTALENVSMSVGSGEIVVALGASGCGKSTLLSLLAGFQPPTSGRVSVDGAPVAGPGADRGVVFQDDALMPWLNVIENVAFGL 101          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_BURMA (Taurine import ATP-binding protein tauB OS=Burkholderia mallei GN=tauB PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.543e-13
Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = -3
Query:   49 AVLHAQGICLGY----GGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGL 336
            A L AQ + + Y    G  + LE   + +  GE+V  LG SG GK  LL +LAGF  P  G + + G P+ GP     V FQD +L+PWL++ +NVAFGL
Sbjct:    2 AKLCAQQVSVVYASRRGALTALENVSMSVGSGEIVVALGASGCGKSTLLSLLAGFQPPTSGRVSVDGAPVAGPGADRGVVFQDDALMPWLNVIENVAFGL 101          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_BURPS (Taurine import ATP-binding protein tauB OS=Burkholderia pseudomallei GN=tauB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.015e-13
Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = -3
Query:   49 AVLHAQGICLGY----GGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGL 336
            A L AQ + + Y    G  + LE   + +  GE+V  LG SG GK  LL +LAGF  P  G + + G P+ GP     V FQD +L+PWL++ +NVAFGL
Sbjct:    2 AKLCAQQVSVVYASRRGALTALENVSMSVGSGEIVVALGASGCGKSTLLSLLAGFQPPTSGRVSVDGVPVAGPGADRGVVFQDDALMPWLNVIENVAFGL 101          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: UGPC_PARDP (sn-glycerol-3-phosphate import ATP-binding protein ugpC OS=Paracoccus denitrificans (strain Pd 1222) GN=ugpC PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.632e-13
Identity = 39/101 (38.61%), Postives = 61/101 (60.40%), Query Frame = -3
Query:   10 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPR---VAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEER 303
            Y GN V+ G  +++  GE V I+GPSG GK  LLR++AG  A   G++ + G+ +N   PR   +A+ FQ+ +L P +S+ +N+A+GL  A+      E R
Sbjct:   13 YAGNQVIHGITMEIADGEFVVIVGPSGCGKSTLLRMVAGLEAISAGTVEIGGKVVNDLEPRQRDIAMVFQNYALYPHMSVRENMAYGLKIAKLPKTEIEAR 113          
The following BLAST results are available for this feature:
BLAST of EY692465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
SSUB2_AGRT59.046e-1438.18Aliphatic sulfonates import ATP-binding protein ss... [more]
NRTD_SYNE79.046e-1441.94Nitrate transport ATP-binding protein nrtD OS=Syne... [more]
Y3108_BRUME1.181e-1340.86Putative ATP-binding protein BMEII0108 OS=Brucella... [more]
TAUB1_BURXL1.181e-1342.06Taurine import ATP-binding protein tauB 1 OS=Burkh... [more]
SSUB2_PSEAE1.181e-1344.90Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB1_PSEAB1.181e-1344.90Aliphatic sulfonates import ATP-binding protein ss... [more]
TAUB_BURP11.543e-1343.00Taurine import ATP-binding protein tauB OS=Burkhol... [more]
TAUB_BURMA1.543e-1343.00Taurine import ATP-binding protein tauB OS=Burkhol... [more]
TAUB_BURPS2.015e-1343.00Taurine import ATP-binding protein tauB OS=Burkhol... [more]
UGPC_PARDP2.632e-1338.61sn-glycerol-3-phosphate import ATP-binding protein... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-H10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692465 ID=EY692465; Name=EY692465; organism=Citrus sinensis; type=EST; length=563bp
CCGGTTGCGTCGTTCTTCAGGACTGAGGTGCGCTTTTCGGGCAAAGTCCA
GGCCAAAGGCGACGTTCTTTTCCAGGCTCAACCACGGCAACAGGCTGGGG
TCCTGGAACGCCACCGCCACCCGCGGATGCGGGCCATTCAACGGCTCGCC
CAGCAGGTGAATGCTGCCGCCCTGGGGCGCCGGAAAACCGGCAAGCACCC
GCAGCAGGTGGAACTTGCCAACGCCGCTGGGGCCGAGGATCGACACCACT
TCGCCGGGCTGCAATTGCAGGTCGAACCCTTCCAGCACCGAGTTGCCCCC
ATAGCCCAGGCAAATTCCCTGGGCATGCAGTACCGCCTGGCTCATAGATT
GGCCTGACGGTTCAACTCGGTGCGCAACTGCACCAGGCTCGGGGTCACGA
TCGGCACAAACGCCGACTCGCGCCAACGCCGGGCGAAACCGCTGCCGTGG
GCAGTCACGTAGGCCTTGCCGCCGCTGGCTTGCAGCTCCCCTTGGACGGG
GCTGGGGGCAATTTCTTCGAGAGCAATGCGCAAGGCGGAACAACGGTACC
GGCTCGGTCCCGA
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