CX671432

Overview
NameCX671432
Unique NameCX671432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: CYB2_HANAN (Cytochrome b2, mitochondrial OS=Hansenula anomala GN=CYB2 PE=1 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 7.393e-37
Identity = 85/208 (40.87%), Postives = 126/208 (60.58%), Query Frame = -2
Query:  252 LTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGR-----IPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVT 860
            +TVD P LGRRE D+K +F         + QG D    D     G +  ++  ID SLSWKD+ ++++ITK+PI++KGV   ED             +SNHG RQLDY  A +  L EV+   + R     I +F+DGGVRRGTDV KAL LGA G+ +GRP +Y++++ G+KGV + +++L++E E+ M L G   ++E+T + + T
Sbjct:  340 ITVDAPSLGRREKDMKMKFEAD-----SDVQGDD---EDIDRSQGASRALSSFIDPSLSWKDIAFIKSITKMPIVIKGVQRKEDVLLAAEHGLQGVVLSNHGGRQLDYTRAPVEVLAEVMPILKERGLDQKIDIFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYAMSSYGDKGVTKAIQLLKDEIEMNMRLLGVNKIEELTPELLDT 539          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: CYB2_YEAST (Cytochrome b2, mitochondrial OS=Saccharomyces cerevisiae GN=CYB2 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.105e-32
Identity = 82/204 (40.20%), Postives = 120/204 (58.82%), Query Frame = -2
Query:  264 LTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGR-----IPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRD 860
            +TVD P LG+RE D+K +F+     T    + +    ++E+   G +  ++  ID SL+WKD++ L+  TKLPI++KGV   ED             +SNHG RQLD+  A I  L E +   + R     + VF+DGGVRRGTDV KAL LGA G+ +GRP +Y+ +  G  GV + +E+LR+E E++M L G  S+ E+  D
Sbjct:  359 VTVDAPSLGQREKDMKLKFSN----TKAGPKAMKKTNVEESQ--GASRALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELKPD 556          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_PSEPK (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain KT2440) GN=lldD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.641e-31
Identity = 70/179 (39.11%), Postives = 106/179 (59.22%), Query Frame = -2
Query:  240 DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDA 761
            DLG + +   N +GLA Y+       D S+SWKD++W++     P+++KG+L A+D             VSNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + +ALGA  + IGR  +Y+LA  G+ GV+ +LE+  +E  +AM L+G +S+ EITRD +V E  A
Sbjct:  203 DLGNISKYRGNPTGLADYIGWLGNNFDPSISWKDLEWIREFWDGPMIIKGILDADDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDLKILADSGIRSGLDVVRMIALGADTVLIGRAFLYALAVHGQAGVKNLLELFEKEMRVAMVLTGAKSISEITRDSLVRELGA 381          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_PSEP1 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=lldD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.641e-31
Identity = 70/179 (39.11%), Postives = 106/179 (59.22%), Query Frame = -2
Query:  240 DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDA 761
            DLG + +   N +GLA Y+       D S+SWKD++W++     P+++KG+L A+D             VSNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + +ALGA  + IGR  +Y+LA  G+ GV+ +LE+  +E  +AM L+G +S+ EITRD +V E  A
Sbjct:  203 DLGNISKYRGNPTGLADYIGWLGNNFDPSISWKDLEWIREFWDGPMIIKGILDADDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDLKILADSGIRSGLDVVRMIALGADTVLIGRAFLYALAVHGQAGVKNLLELFEKEMRVAMVLTGAKSISEITRDSLVRELGA 381          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_PSEPG (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain GB-1) GN=lldD PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.062e-31
Identity = 70/179 (39.11%), Postives = 106/179 (59.22%), Query Frame = -2
Query:  240 DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDA 761
            DLG + +   N +GLA Y+       D S+SWKD++W++     P+++KG+L A+D             VSNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + +ALGA  + IGR  +Y+LA  G+ GV+ +LE+  +E  +AM L+G +S+ EITRD +V E  A
Sbjct:  203 DLGNISKYRGNPTGLADYIGWLGNNFDPSISWKDLEWIREYWDGPMIIKGILDADDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDLKILADSGIRSGLDVVRMIALGADTVLIGRAFLYALAVHGQAGVKNLLELFEKEMRVAMVLTGAKSISEITRDSLVRELGA 381          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_PSEE4 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas entomophila (strain L48) GN=lldD PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.062e-31
Identity = 71/179 (39.66%), Postives = 105/179 (58.66%), Query Frame = -2
Query:  240 DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDA 761
            DLG + +   N +GLA Y+       D S+SWKD++W++     P+++KG+L A+D             VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + IGR  +Y+LA  GE GV+ +L +  +E  +AM L+G +S+ EITRD +V E  A
Sbjct:  203 DLGNISKYRGNPTGLADYIGWLGNNFDPSISWKDLEWIREFWDGPMIIKGILDADDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIKILADSGIRSGLDVVRMIALGADTVLIGRAFLYALATHGEAGVKNLLALFEKEMRVAMVLTGAKSISEITRDSLVRELGA 381          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_PSEA7 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa (strain PA7) GN=lldD PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.350e-30
Identity = 70/179 (39.11%), Postives = 104/179 (58.10%), Query Frame = -2
Query:  240 DLGKMD--EANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDA 761
            DLG +     N +GL  Y+       D S+SWKD++W++     P+++KG+L  ED             VSNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + +ALGA  + +GR  VY+LAA GE GVR +LE++ +E  +AM L+G +S+ EI+ D +V E  A
Sbjct:  203 DLGNISTYRGNPTGLEDYIGWLGANFDPSISWKDLEWIREFWNGPMVIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGELAILADSGIRTGLDVVRMIALGADSVLLGRAFVYALAAAGEAGVRNLLELIEKEMRVAMVLTGAKSIGEISADSLVRELGA 381          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_PSEAE (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa GN=lldD PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.764e-30
Identity = 70/179 (39.11%), Postives = 104/179 (58.10%), Query Frame = -2
Query:  240 DLGKMD--EANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDA 761
            DLG +     N +GL  Y+       D S+SWKD++W++     P+++KG+L  ED             VSNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + +ALGA  + +GR  VY+LAA GE GVR +LE++ +E  +AM L+G +S+ EI+ D +V E  A
Sbjct:  203 DLGNISAYRGNPTGLEDYIGWLGANFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGELAILADSGIRTGLDVVRMIALGADSVLLGRAFVYALAAAGEAGVRNLLELIEKEMRVAMVLTGAKSIGEISADSLVRELGA 381          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_PSEA8 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa (strain LESB58) GN=lldD PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.764e-30
Identity = 70/179 (39.11%), Postives = 104/179 (58.10%), Query Frame = -2
Query:  240 DLGKMD--EANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDA 761
            DLG +     N +GL  Y+       D S+SWKD++W++     P+++KG+L  ED             VSNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + +ALGA  + +GR  VY+LAA GE GVR +LE++ +E  +AM L+G +S+ EI+ D +V E  A
Sbjct:  203 DLGNISAYRGNPTGLEDYIGWLGANFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGELAILADSGIRTGLDVVRMIALGADSVLLGRAFVYALAAAGEAGVRNLLELIEKEMRVAMVLTGAKSIGEISADSLVRELGA 381          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_CITK8 (L-lactate dehydrogenase [cytochrome] OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=lldD PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.303e-30
Identity = 78/230 (33.91%), Postives = 119/230 (51.74%), Query Frame = -2
Query:  231 TVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLP 857
            TVD P  G R  D  +  + P     + +Q                  DLG +       +GL  Y+   A   D S+SWKD++W++     P+++KG+L  ED             VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L+++ +E ++AM L+G +S+ EI+RD +V E   SLP
Sbjct:  155 TVDMPTPGARYRDAHSGMSGPNAALRRYWQAATHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATAGQAGVANLLDLIEKEMKVAMTLTGAKSISEISRDSLVQELGKSLP 384          
The following BLAST results are available for this feature:
BLAST of CX671432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
CYB2_HANAN7.393e-3740.87Cytochrome b2, mitochondrial OS=Hansenula anomala ... [more]
CYB2_YEAST1.105e-3240.20Cytochrome b2, mitochondrial OS=Saccharomyces cere... [more]
LLDD_PSEPK4.641e-3139.11L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEP14.641e-3139.11L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEPG6.062e-3139.11L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEE46.062e-3139.66L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEA71.350e-3039.11L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEAE1.764e-3039.11L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEA81.764e-3039.11L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_CITK82.303e-3033.91L-lactate dehydrogenase [cytochrome] OS=Citrobacte... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11A07_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11A07-B13-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671432 ID=CX671432; Name=CX671432; organism=Citrus sinensis; type=EST; length=864bp
TTTTTTTTATCAATCAACATCCGAGCAAAAACTATATAGATAAAGTTTTA
AAGAAAGAATATACAGGAAAGGGCAGAAGTAGCCATAATCATCATAACAG
AAGCTTAAAATAATTCAGACTCAATTAAACATGAACAAGTTCTCCAAGAA
AAAGAAGTAATAGAAAGTAACCAAATTATTGCTCTTTCTTCTATTTTGCA
TGCACGTATCTATAACCTGGGAACCGGACGAGGGAGAGAAGCATCCCATT
CAGTGACGATGTGATCACGAGTAATCTCTTTGAGTGAGCGGCAACCACTT
AGTGCCATTGCTAGCTCAAATTCTTCACGCAGCATCTCGAGTACTCTTCT
AACGCCTTTCTCTCCCTCAGCTGCCAATGAGTACACCACTGGTCGTCCAA
TAAATATACCAGAGGCTCCAAGTGCCAAGGCTTTGAAGACATCAGTTCCT
CGCCTAACACCACCATCCAAGAACACAGGAATACGCCCCTGAGTAGCTTT
CACAACCTCTTCCAGGGCCATGATAGTGGCAGGGACATAGTCAAGTTGAC
GAGCTCCATGATTGGATACAATAATCCCAGCTGCTCCAGCTTGAACTGCA
ATCCGCGCATCCTCTGCTGTGAGTACACCCTTCACCAGAATTGGCAATTT
GGTGATTGTTTGAAGCCACTTCACGTCCTTCCAGCTCAGAGAACGATCAA
TTTGACCAGCAACATAGGCAGCAAGCCCAGAGTCATTTGCCTCGTCCATC
TTGCCAAGGTCCAAACCCTGAAAATTCTTTAATGTCAAAAATGGTGGTAG
AGTGAATCTGTTTTTGATGTCAGCTTCTCTGCGACCCAGCCTCGGGGTAT
CAACTGTTAGAGCA
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