CX671432

Overview
NameCX671432
Unique NameCX671432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_STRMK (L-lactate dehydrogenase [cytochrome] OS=Stenotrophomonas maltophilia (strain K279a) GN=lldD PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.929e-30
Identity = 69/175 (39.43%), Postives = 103/175 (58.86%), Query Frame = -2
Query:  252 DLGKMD--EANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVT 761
            DLG +     N +GL  Y+       D S+SWKD++W++   K P+++KG+L  +D             VSNHG RQLD V +T  AL  +  A QG + +  D G+R G DV + LALGA  + +GR  VY+LAA+GE GV  +L+++ +E  +AM L+G R + +I RD +V+
Sbjct:  203 DLGNISTYRGNPTGLEDYIGWLGSNFDPSISWKDLEWIREFWKGPMVIKGILDPDDARDAVRFGADGIVVSNHGGRQLDGVLSTARALPAIADAVQGDLKILADSGIRTGLDVVRMLALGADTVLLGRAFVYALAAQGEAGVANLLDLIAKEMRVAMTLTGARRIADIGRDSLVS 377          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_PSEAB (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=lldD PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.929e-30
Identity = 69/179 (38.55%), Postives = 104/179 (58.10%), Query Frame = -2
Query:  240 DLGKMD--EANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDA 761
            DLG +     N +GL  Y+       D S++WKD++W++     P+++KG+L  ED             VSNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + +ALGA  + +GR  VY+LAA GE GVR +LE++ +E  +AM L+G +S+ EI+ D +V E  A
Sbjct:  203 DLGNISAYRGNPTGLEDYIGWLGANFDPSIAWKDLEWIREFWDGPMVIKGILDPEDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGELAILADSGIRTGLDVVRMIALGADSVLLGRAFVYALAAAGEAGVRNLLELIEKEMRVAMVLTGAKSIGEISADSLVRELGA 381          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_STRM5 (L-lactate dehydrogenase [cytochrome] OS=Stenotrophomonas maltophilia (strain R551-3) GN=lldD PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.131e-30
Identity = 69/174 (39.66%), Postives = 102/174 (58.62%), Query Frame = -2
Query:  255 DLGKMD--EANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 761
            DLG +     N +GL  Y+       D S+SWKD++W++   K P+++KG+L  +D             VSNHG RQLD V +T  AL  +  A QG + +  D G+R G DV + LALGA  + +GR  VY+LAA+GE GV  +L+++ +E  +AM L+G R + +I RD +V
Sbjct:  203 DLGNISTYRGNPTGLEDYIGWLGSNFDPSISWKDLEWIREFWKGPMVIKGILDPDDARDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVQGDLKILADSGIRTGLDVVRMLALGADTVLLGRAFVYALAAQGEAGVANLLDLIAKEMRVAMTLTGARRIADIGRDSLV 376          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_ESCF3 (L-lactate dehydrogenase [cytochrome] OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=lldD PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.131e-30
Identity = 77/230 (33.48%), Postives = 120/230 (52.17%), Query Frame = -2
Query:  231 TVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLP 857
            TVD P  G R  D  +  + P     + +Q +                DLG +       +GL  Y+   A   D S+SWKD++W++     P+++KG+L  ED             VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++ +E ++AM L+G +S+ EI++D +V E D +LP
Sbjct:  155 TVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLNLIEKEMKVAMTLTGAKSISEISQDSLVQELDKALP 384          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_ENTS8 (L-lactate dehydrogenase [cytochrome] OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=lldD PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.702e-30
Identity = 68/174 (39.08%), Postives = 102/174 (58.62%), Query Frame = -2
Query:  255 DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 761
            DLG +       +GL  Y+   A   D S+SWKD++W++     P+++KG+L  ED             VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  GEKGV  +L ++ +E  +AM L+G +S+KEITR+ +V
Sbjct:  203 DLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDITILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATHGEKGVANLLNLIEKEMRVAMTLTGAKSIKEITRESLV 376          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_SALCH (L-lactate dehydrogenase [cytochrome] OS=Salmonella choleraesuis GN=lldD PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.753e-30
Identity = 77/230 (33.48%), Postives = 120/230 (52.17%), Query Frame = -2
Query:  231 TVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLP 857
            TVD P  G R  D  +  + P    L+ +Q +                DLG +       +GL  Y+   A   D S+SWKD++W++     P+++KG+L  ED             VSNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L+++ +E ++AM L+G +++ EI+ D +V E   SLP
Sbjct:  155 TVDMPTPGARYRDAHSGMSGPNAAMLRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLTGAKTISEISGDSLVQELGKSLP 384          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_ERWCT (L-lactate dehydrogenase [cytochrome] OS=Erwinia carotovora subsp. atroseptica GN=lldD PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.753e-30
Identity = 78/222 (35.14%), Postives = 117/222 (52.70%), Query Frame = -2
Query:  255 TVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 857
            TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SW+D+ W++   K P+++KG+L  ED             VSNHG RQLD V +T  AL  +  A +G I +  D G+R G DV + +ALGA G+ +GR  VY+LAA GE GV  +L ++ +E  +AM L+G +S+ +IT D +V
Sbjct:  155 TVDMPTPGARYRDAHSGMSGPNAAARRMLQAVTHPQWAWDVGLNGKPHDLGNVSAYRGKPTTLEDYIGWLAANFDPSISWQDLAWIREFWKGPMIIKGILDPEDAKEAVRFGADGIVVSNHGGRQLDGVLSTAHALPAIADAVKGDITILADSGIRSGLDVVRMIALGADGVMLGRAFVYALAAAGEAGVVNLLNLIEKEMRVAMTLTGAKSIADITSDSLV 376          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_PSEPW (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain W619) GN=lldD PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.143e-29
Identity = 67/179 (37.43%), Postives = 106/179 (59.22%), Query Frame = -2
Query:  240 DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDA 761
            DLG + +   N +GLA Y+       D S+SWKD++W++     P+++KG+L A+D             VSNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + +ALGA  + IGR  +++LA  G+ GV+ +LE+  +E  +AM L+G +++ EI+RD +V E  A
Sbjct:  203 DLGNISKYRGNPTGLADYIGWLGSNFDPSISWKDLEWIREFWDGPMIIKGILDADDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDLKILADSGIRSGLDVVRMIALGADTVLIGRAFLWALAVHGQAGVKNLLELFEKEMRVAMVLTGAKAISEISRDSLVRELGA 381          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_AZOC5 (L-lactate dehydrogenase [cytochrome] OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=lldD PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.143e-29
Identity = 80/222 (36.04%), Postives = 117/222 (52.70%), Query Frame = -2
Query:  255 TVDTPRLGRREADIKNRFTLPPFLTLKNFQG-------LDLGKMDEANDSG-----------LAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 857
            TVD P  G R  D  +  +     T +  Q        LD+G + + +D G           LA Y+   A   D S+SWKD++W+++  K P+++KG+L   D             VSNHG RQLD V ++  AL  +  A    + V  D G+R G DV + LALGA G+ +GR   Y+LA  G+ GV  +L+++ +E  +AMAL+G RS+ EITRD +V
Sbjct:  155 TVDMPVPGARYRDAHSGMSGRSGPTRRVLQAMVHPRWALDVGLLGKPHDLGNISTYRGKPTNLADYIGWLAANFDPSISWKDLEWIRSFWKGPMIIKGILDPVDARDAVAFGADGIVVSNHGGRQLDGVLSSARALPAIADAVGDDLTVLADSGIRTGLDVVRMLALGAKGVLLGRAFAYALATHGQAGVANLLDLIEKEMRVAMALTGARSIAEITRDSLV 376          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_XANP2 (L-lactate dehydrogenase [cytochrome] OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=lldD PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.493e-29
Identity = 78/231 (33.77%), Postives = 119/231 (51.52%), Query Frame = -2
Query:  228 TVDTPRLGRREADIKNRFTLPPFL-------TLKNFQGLDLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLPR 857
            TVD P  G R  D  +  + P           L  F   D+G M   +D G ++AY             +    D S+ WKD++W++   K P+++KG+L  ED             VSNHG RQLD V ++  A+  +  A +G + +  D G+R G DV + LA GA G+ +GR  VY+LAA G  GV  +L+++ +E  +AM L+G R++ +I+RD +V E +  L R
Sbjct:  155 TVDMPVPGARYRDAHSGMSGPNAAFRRMVQAVLHPFWAYDVGLMGTPHDLGNVSAYRKEKTSLEDYVGWLGNNFDPSIGWKDLEWIREFWKGPMVIKGILDPEDARDAVRFGADGIIVSNHGGRQLDGVLSSARAMPAIADAVKGEMTLLADSGIRSGLDVVRMLAQGADGVLLGRAFVYALAAAGRAGVENLLDIIAKEMRVAMTLTGARAISDISRDSLVREIERPLAR 385          
The following BLAST results are available for this feature:
BLAST of CX671432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_STRMK3.929e-3039.43L-lactate dehydrogenase [cytochrome] OS=Stenotroph... [more]
LLDD_PSEAB3.929e-3038.55L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_STRM55.131e-3039.66L-lactate dehydrogenase [cytochrome] OS=Stenotroph... [more]
LLDD_ESCF35.131e-3033.48L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ENTS86.702e-3039.08L-lactate dehydrogenase [cytochrome] OS=Enterobact... [more]
LLDD_SALCH8.753e-3033.48L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_ERWCT8.753e-3035.14L-lactate dehydrogenase [cytochrome] OS=Erwinia ca... [more]
LLDD_PSEPW1.143e-2937.43L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_AZOC51.143e-2936.04L-lactate dehydrogenase [cytochrome] OS=Azorhizobi... [more]
LLDD_XANP21.493e-2933.77L-lactate dehydrogenase [cytochrome] OS=Xanthobact... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11A07_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11A07-B13-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671432 ID=CX671432; Name=CX671432; organism=Citrus sinensis; type=EST; length=864bp
TTTTTTTTATCAATCAACATCCGAGCAAAAACTATATAGATAAAGTTTTA
AAGAAAGAATATACAGGAAAGGGCAGAAGTAGCCATAATCATCATAACAG
AAGCTTAAAATAATTCAGACTCAATTAAACATGAACAAGTTCTCCAAGAA
AAAGAAGTAATAGAAAGTAACCAAATTATTGCTCTTTCTTCTATTTTGCA
TGCACGTATCTATAACCTGGGAACCGGACGAGGGAGAGAAGCATCCCATT
CAGTGACGATGTGATCACGAGTAATCTCTTTGAGTGAGCGGCAACCACTT
AGTGCCATTGCTAGCTCAAATTCTTCACGCAGCATCTCGAGTACTCTTCT
AACGCCTTTCTCTCCCTCAGCTGCCAATGAGTACACCACTGGTCGTCCAA
TAAATATACCAGAGGCTCCAAGTGCCAAGGCTTTGAAGACATCAGTTCCT
CGCCTAACACCACCATCCAAGAACACAGGAATACGCCCCTGAGTAGCTTT
CACAACCTCTTCCAGGGCCATGATAGTGGCAGGGACATAGTCAAGTTGAC
GAGCTCCATGATTGGATACAATAATCCCAGCTGCTCCAGCTTGAACTGCA
ATCCGCGCATCCTCTGCTGTGAGTACACCCTTCACCAGAATTGGCAATTT
GGTGATTGTTTGAAGCCACTTCACGTCCTTCCAGCTCAGAGAACGATCAA
TTTGACCAGCAACATAGGCAGCAAGCCCAGAGTCATTTGCCTCGTCCATC
TTGCCAAGGTCCAAACCCTGAAAATTCTTTAATGTCAAAAATGGTGGTAG
AGTGAATCTGTTTTTGATGTCAGCTTCTCTGCGACCCAGCCTCGGGGTAT
CAACTGTTAGAGCA
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