CX671428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: SAR1A_BOVIN (GTP-binding protein SAR1a OS=Bos taurus GN=SAR1A PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.231e-19 Identity = 47/128 (36.72%), Postives = 83/128 (64.84%), Query Frame = -1 Query: 432 ELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGL 815 +L +GL NAGKT+L++++ + +PT+ ++T +T +DLGG + R +W+ Y A++ IV++VD AD+ L S+ EL+ L++ +++ +P+L+LGNKID+ +A+S+E L E GL Sbjct: 27 KLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGL 153
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL3_RAT (ADP-ribosylation factor-like protein 3 OS=Rattus norvegicus GN=Arl3 PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 2.231e-19 Identity = 51/158 (32.28%), Postives = 82/158 (51.90%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 QE+ + L+GL NAGKT+L+ +A+ S + PT GFN++ V + +WD+GGQ + R W Y ++YV+D+AD + EL +LL + L+ +P+LV NK D A ++ E + L +I DR S + ++W Sbjct: 16 QEVRILLLGLDNAGKTTLLKQLASEDISH-ITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLVFANKQDLLTAAPAAEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNW 172
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL3_MOUSE (ADP-ribosylation factor-like protein 3 OS=Mus musculus GN=Arl3 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.231e-19 Identity = 50/158 (31.65%), Postives = 82/158 (51.90%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 QE+ + L+GL NAGKT+L+ +A+ S + PT GFN++ V + +WD+GGQ + R W Y ++YV+D+AD + EL +LL + L+ +P+L+ NK D A ++ E + L +I DR S + ++W Sbjct: 16 QEVRILLLGLDNAGKTTLLKQLASEDISH-ITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNW 172
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL3_BOVIN (ADP-ribosylation factor-like protein 3 OS=Bos taurus GN=ARL3 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.231e-19 Identity = 48/137 (35.04%), Postives = 77/137 (56.20%), Query Frame = -1 Query: 414 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 824 QE+ + L+GL NAGKT+L+ +A+ S + PT GFN++ V + +WD+GGQ + R W Y ++YV+D+AD + EL +LL + L+ +P+L+ NK D A ++ E + L +I DR Sbjct: 16 QEVRILLLGLDNAGKTTLLKQLASEDISH-ITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDR 151
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: SAR1_SCHPO (Small COPII coat GTPase sar1 OS=Schizosaccharomyces pombe GN=sar1 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.914e-19 Identity = 51/136 (37.50%), Postives = 81/136 (59.56%), Query Frame = -1 Query: 408 ELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREV 815 ++ +GL NAGKT+L++++ + M PT+ ++ GNV +DLGG + R +W Y V+ IVY+VD D++ L S++EL LL+ L +P L+LGNKID P A+S+++L +GL T + V Sbjct: 22 KMLFLGLDNAGKTTLLHMLKNDRLAV-MQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKIDAPGAISEDELKAALGLYQTTGKGV 156
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: SAR1A_MOUSE (GTP-binding protein SAR1a OS=Mus musculus GN=Sar1a PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.914e-19 Identity = 47/128 (36.72%), Postives = 82/128 (64.06%), Query Frame = -1 Query: 432 ELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGL 815 +L +GL NAGKT+L+ ++ + +PT+ ++T +T +DLGG + R +W+ Y A++ IV++VD AD+ L S+ EL+ L++ +++ +P+L+LGNKID+ +A+S+E L E GL Sbjct: 27 KLVFLGLDNAGKTTLLQMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIKGL 153
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF4_BOVIN (ADP-ribosylation factor 4 OS=Bos taurus GN=ARF4 PE=2 SV=3) HSP 1 Score: 95.9005 bits (237), Expect = 2.914e-19 Identity = 46/158 (29.11%), Postives = 84/158 (53.16%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 ++M + ++GL AGKT+++ + G IPT+GFN+ V N+ +WD+GGQ + R +W Y + +++VVD+ D + + EL +L + L LL+ NK D P A++ ++ +++GL+S+ +R T + +DW Sbjct: 16 KQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAEELQKMLQEDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDW 172
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: SAR1_PHANO (Small COPII coat GTPase SAR1 OS=Phaeosphaeria nodorum GN=SAR1 PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.805e-19 Identity = 51/134 (38.06%), Postives = 81/134 (60.45%), Query Frame = -1 Query: 414 ELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 815 +L +GL NAGKT+L++++ + + PT+ +++ GNV +DLGG + R +W Y VS IV++VDA D++ L S++EL LL+ L P ++LGNKID PEA+S++ L +GL T + Sbjct: 18 KLLFLGLDNAGKTTLLHMLKNDRVAV-LQPTLHPTSEELSIGNVKFTTFDLGGHAQARRLWRDYFPEVSGIVFLVDAKDHERLNESKAELDALLAMEELKNTPFVILGNKIDHPEAVSEDQLRATLGLYQTTGK 150
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL4D_BOVIN (ADP-ribosylation factor-like protein 4D OS=Bos taurus GN=ARL4D PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.805e-19 Identity = 49/139 (35.25%), Postives = 82/139 (58.99%), Query Frame = -1 Query: 423 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVT-----KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSI 824 Q + + +IGL +AGKTSL+ + + + IPT GFN K+ +T ++WD+GGQ + R +W Y R +V+VVDAA+ + L ++ ELH + G+P+LVL NK D+P ALS ++ +++ ++ + Sbjct: 19 QALHVVVIGLDSAGKTSLLYRLKFKEFVQS-IPTKGFNTEKIRVPLGGSRGITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDAAEAERLEEAKVELHRISRASDNQGVPVLVLANKQDQPGALSAAEVEKRLAVREL 156
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: AR13B_DANRE (ADP-ribosylation factor-like protein 13B OS=Danio rerio GN=arl13b PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.805e-19 Identity = 49/147 (33.33%), Postives = 86/147 (58.50%), Query Frame = -1 Query: 387 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVC-CYMISC 824 +++ L ++GL NAGKT+ V I G D+ PTVGF+ + +G + ++DLGG R R +W+ Y +V+VVD++D + +R + ++L P + G P+LVL NK D+ A+++ D++E + L+ + + C C + C Sbjct: 20 RKVTLVMVGLDNAGKTATVRGIQ-GESPLDVAPTVGFSKVDLKQGKFEVTIFDLGGGKRIRGIWKNYYSESYGVVFVVDSSDVQRIQETRDTMAEVLRHPRIAGKPVLVLANKQDQDGAMAEADIIETLSLEKLVNENKCLCQIEPC 165 The following BLAST results are available for this feature:
BLAST of CX671428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671428 ID=CX671428; Name=CX671428; organism=Citrus sinensis; type=EST; length=824bpback to top |