CX671426
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: GBB1_BOVIN (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Bos taurus GN=GNB1 PE=1 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 1.004e-11 Identity = 52/179 (29.05%), Postives = 83/179 (46.37%), Query Frame = -3 Query: 240 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYC--TSLNWSVDGSTLFSGYTDGVIRVW 764 HT ++SC RF + IV++S D T +W++ + T GHTG V +++++PD L SG D LWD+ EG R + I+A+CF PN + + + + +++DL + + D NI C TS+++S G L +GY D VW Sbjct: 142 HTGYLSCCRFLDDN---QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD--------------------NIICGITSVSFSKSGRLLLAGYDDFNCNVW 297
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: KTNB1_DANRE (Katanin p80 WD40-containing subunit B1 OS=Danio rerio GN=katnb1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.311e-11 Identity = 37/125 (29.60%), Postives = 67/125 (53.60%), Query Frame = -3 Query: 396 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGA-VIHALCFSPNRYWLCAATEQS-IKIWDLESKSIVED 764 HT V C++F N+ + +V+ S ++++W+L K+ TL GH ++++ P G ASG D I LWD+ ++ + L FSP+ WL +A++ S +K+WDL + ++ + Sbjct: 62 HTSAVGCIQF--NSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITE 184 HSP 2 Score: 68.9366 bits (167), Expect = 3.814e-11 Identity = 44/136 (32.35%), Postives = 70/136 (51.47%), Query Frame = -3 Query: 417 IKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA-GAVIHALCFSPNRYWLCAATEQSIKIWDLE 821 IKLW+ K + HT+ V C+ FSP+ + SAS D TVK+W+L K+ HT VN V P+ L ASG D + LWDL + + S + V+ ++ F+P+ L + +E +++++ E Sbjct: 129 IKLWDV--RRKGCVFRYKGHTQAVRCLAFSPDG--KWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSENTLRVYGWE 260
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: KTNB1_CHICK (Katanin p80 WD40-containing subunit B1 OS=Gallus gallus GN=KATNB1 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.311e-11 Identity = 45/136 (33.09%), Postives = 71/136 (52.21%), Query Frame = -3 Query: 417 IKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV-IHALCFSPNRYWLCAATEQSIKIWDLE 821 IKLW+ K I + +HT+ V C+RFSP+ + SA+ D TVK+W+L+ K+ GH+G VN V P L ASG D I WDL + + ++ A + + F+P+ L + S++++ E Sbjct: 129 IKLWDV--RRKGCIFKYKSHTQAVRCLRFSPDG--KWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWE 260
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: GBB1_CRIGR (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Cricetulus griseus GN=GNB1 PE=2 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.712e-11 Identity = 52/179 (29.05%), Postives = 83/179 (46.37%), Query Frame = -3 Query: 240 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYC--TSLNWSVDGSTLFSGYTDGVIRVW 764 HT ++SC RF + IV++S D T +W++ + T GHTG V +++++PD L SG D LWD+ EG R + I+A+CF PN + + + + +++DL + + D NI C TS+++S G L +GY D VW Sbjct: 142 HTGYLSCCRFLNDN---QIVTSSEDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD--------------------NIICGITSVSFSKSGRLLLAGYDDFNCNVW 297
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: WDR48_XENTR (WD repeat-containing protein 48 OS=Xenopus tropicalis GN=wdr48 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.236e-11 Identity = 59/211 (27.96%), Postives = 92/211 (43.60%), Query Frame = -3 Query: 228 IKLWNTLGECKYT--IQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCA-----------ATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 821 I++WN + + K I + HT+WV+ + N T++SAS D TVKVWN +TL H YV +A + D L AS G D I LWD+ L + + +L + + + A +TE+ +++WD + + LK N+ LN DG+ SG +DG IR+W +G+ Sbjct: 54 IRIWN-VNQHKQDPYIASMEHHTDWVNDIVLCCNG--KTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCQKLMKLK------------------GHTDNVKALLLN--RDGTQCLSGSSDGTIRLWSLGQ 241
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: KTNB1_MOUSE (Katanin p80 WD40-containing subunit B1 OS=Mus musculus GN=Katnb1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.236e-11 Identity = 43/137 (31.39%), Postives = 75/137 (54.74%), Query Frame = -3 Query: 417 IKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA-GAVIHALCFSPNRYWLCAATEQSIKIWDLE 821 IKLW+ + C + + H++ V C+RFSP+ + SA+ D TVK+W+L+ K+ + GHTG VN V P+ L ASG D I WDL + + + ++ + ++ F+P+ L + + S++++ E Sbjct: 129 IKLWDIRRKGCVFRYR---GHSQAVRCLRFSPDG--KWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: KTNB1_HUMAN (Katanin p80 WD40-containing subunit B1 OS=Homo sapiens GN=KATNB1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.236e-11 Identity = 43/137 (31.39%), Postives = 75/137 (54.74%), Query Frame = -3 Query: 417 IKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA-GAVIHALCFSPNRYWLCAATEQSIKIWDLE 821 IKLW+ + C + + H++ V C+RFSP+ + SA+ D TVK+W+L+ K+ + GHTG VN V P+ L ASG D I WDL + + + ++ + ++ F+P+ L + + S++++ E Sbjct: 129 IKLWDIRRKGCVFRYR---GHSQAVRCLRFSPDG--KWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: Y163_SYNY3 (Uncharacterized WD repeat-containing protein sll0163 OS=Synechocystis sp. (strain PCC 6803) GN=sll0163 PE=4 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.920e-11 Identity = 48/139 (34.53%), Postives = 72/139 (51.80%), Query Frame = -3 Query: 414 TIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA-GAVIHALCFSPNRYW-LCAATEQSIKIWDLES 824 T ++W+ LG T+ H V RFSP VSA D T ++W+ S K A L GH G V TV SPDG + + DG LWDL+ G+ L +L+ G + + FSP+ W L ++ + + K+W +++ Sbjct: 1529 TARIWDFLGRPLLTLA---GHQSIVYQARFSPEGNLIATVSA--DHTARLWDRSG-KTVAVLYGHQGLVGTVDWSPDGQMLVTASNDGTARLWDLS-GRELLTLEGHGNWVRSAEFSPDGRWVLTSSADGTAKLWPVKT 1660
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: TUP11_SCHPO (Transcriptional repressor tup11 OS=Schizosaccharomyces pombe GN=tup11 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.920e-11 Identity = 47/153 (30.72%), Postives = 77/153 (50.33%), Query Frame = -3 Query: 408 IKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK------------LRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA--GAVIHALCFSPN-RYWLCAATEQSIKIWDLESKS 821 I++W+ G ++ + H E V + FSP++ ++S S D+T+KVW L + +AT GHT +V +VAVSPD SG KD + WDL G+ + +VI ++CFSP+ R + + + +IW ++ S Sbjct: 467 IRVWSVSGTL---VERLEGHKESVYSIAFSPDS--SILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVI-SVCFSPDGRQFASGSGDLRARIWSIDPAS 613 HSP 2 Score: 68.1662 bits (165), Expect = 6.506e-11 Identity = 48/173 (27.75%), Postives = 85/173 (49.13%), Query Frame = -3 Query: 240 WVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAAT-EQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVW 755 +V + FSP+ +V+ + DR +K+W+LS K+R +GH + ++ S +G SG D LWD+ G+ + L+ + A+ SPN ++ + +Q I++W + S ++VE L+ +++Y S+ +S D S L SG D I+VW Sbjct: 362 YVRTIAFSPDGKY--LVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSV-SGTLVERLE------------------GHKESVY--SIAFSPDSSILLSGSLDKTIKVW 511
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: TAF5_MOUSE (Transcription initiation factor TFIID subunit 5 OS=Mus musculus GN=Taf5 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.920e-11 Identity = 55/198 (27.78%), Postives = 86/198 (43.43%), Query Frame = -3 Query: 240 TIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK--RLYSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVW 824 T++LW+ +G + W + +FSP VS DR ++W + + AGH VN P+ + A+G D + LWD+ G R+++ G IH+L FSPN R+ AT+ + +WD+ +V +LK + C SL +S DG L SG D +R+W Sbjct: 567 TVRLWSLQTFTCLVGYKGHNYPVWDT--QFSPYGYY--FVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGP-IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELK-------------------GHTDTVC-SLRFSRDGEILASGSMDNTVRLW 739 The following BLAST results are available for this feature:
BLAST of CX671426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671426 ID=CX671426; Name=CX671426; organism=Citrus sinensis; type=EST; length=826bpback to top |