CX671416

Overview
NameCX671416
Unique NameCX671416
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX671416 vs. ExPASy Swiss-Prot
Match: SUS2_DAUCA (Sucrose synthase isoform 2 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 406.371 bits (1043), Expect = 1.193e-112
Identity = 194/233 (83.26%), Postives = 213/233 (91.42%), Query Frame = -1 
Query:  218 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 916
            LFTMARLD VKNLTG+VEWY KN KLRELVNLVVVGGDRRKESKDLEEQA+MKKMY LID YKLNGQFRWIS+Q NRVRNGELYR I DTKGAFVQPA YEAFGLTV+EAMTCGLPTFAT  GGPAEIIV+G SG+HIDPYHGE+AAE++V+FFE+CK +PS+W+ IS GGLKRI+EKYTW+IYS+RLLTL GVYGFWKHVS LDR+E RRYLEMF ALKYR LAESVPLAV+
Sbjct:  569 LFTMARLDNVKNLTGIVEWYAKNPKLRELVNLVVVGGDRRKESKDLEEQAQMKKMYGLIDTYKLNGQFRWISAQKNRVRNGELYRCIADTKGAFVQPAFYEAFGLTVIEAMTCGLPTFATIHGGPAEIIVHGTSGFHIDPYHGEKAAELIVNFFERCKTEPSHWETISAGGLKRIQEKYTWQIYSERLLTLGGVYGFWKHVSKLDRIEIRRYLEMFCALKYRNLAESVPLAVD 801
[Close]
BLAST of CX671416 vs. ExPASy Swiss-Prot
Match: SUS1_MAIZE (Sucrose synthase 1 OS=Zea mays GN=SH-1 PE=2 SV=1)

HSP 1 Score: 394.045 bits (1011), Expect = 6.127e-109
Identity = 184/233 (78.97%), Postives = 210/233 (90.13%), Query Frame = -1 
Query:  218 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 916
            +F+MARLDRVKN+TGLVE YGKNA+LREL NLV+V GD  KESKD EEQAE KKMYSLID+YKL G  RWIS+QMNRVRNGELYRYICDTKGAFVQPA YEAFGLTV+E+MTCGLPT ATC GGPAEIIV+G SG HIDPYH ++AA+ILV+FF+KCKADPSYWD+IS GGL+RI EKYTWK+YS+RL+TLTGVYGFWK+VSNL+R E+RRY+EMFYALKYR LA  VPL+ +
Sbjct:  570 IFSMARLDRVKNMTGLVEMYGKNARLRELANLVIVAGDHGKESKDREEQAEFKKMYSLIDEYKLKGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAFYEAFGLTVIESMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVNFFDKCKADPSYWDEISQGGLQRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYIEMFYALKYRSLASQVPLSFD 802
[Close]
BLAST of CX671416 vs. ExPASy Swiss-Prot
Match: SUS1_TULGE (Sucrose synthase 1 OS=Tulipa gesneriana PE=2 SV=1)

HSP 1 Score: 393.275 bits (1009), Expect = 1.045e-108
Identity = 185/233 (79.40%), Postives = 212/233 (90.99%), Query Frame = -1 
Query:  218 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 916
            +F+MARLDRVKN+TGLVE YGKN +L+ELVNLVVV GD  KESKDLEEQAE+KKMY LI++YKL G  RWIS+QMNRVRNGELYRYI DTKGAFVQPA YEAFGLTVVE+MTCGLPTFATC GGPAEIIV+G SG+HIDPYHG++A+E LV FFEKCK DP++W+KIS GGL+RI EKYTWK+YS+RL+TL GVYGFWK+VSNLDR E+RRYLEMFYALKYR LA+SVPLA++
Sbjct:  572 IFSMARLDRVKNMTGLVELYGKNDRLKELVNLVVVAGDHGKESKDLEEQAELKKMYKLIEEYKLQGHIRWISAQMNRVRNGELYRYIADTKGAFVQPAFYEAFGLTVVESMTCGLPTFATCHGGPAEIIVHGVSGFHIDPYHGDKASEQLVSFFEKCKEDPAHWEKISQGGLQRIYEKYTWKLYSERLMTLAGVYGFWKYVSNLDRRETRRYLEMFYALKYRNLAKSVPLAID 804
[Close]
BLAST of CX671416 vs. ExPASy Swiss-Prot
Match: SUS1_HORVU (Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 SV=1)

HSP 1 Score: 390.963 bits (1003), Expect = 5.187e-108
Identity = 185/233 (79.40%), Postives = 209/233 (89.70%), Query Frame = -1 
Query:  218 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 916
            +F+MARLDRVKN+TGLVE YGKNA L++L NLV+V GD  KESKD EEQAE K+MYSLI++YKL G  RWIS+QMNRVRNGELYRYICDTKGAFVQPA YEAFGLTV+EAMTCGLPT ATC GGPAEIIV+G SG HIDPYH ++AA+ILV+FFEK  ADPSYWDKIS GGLKRI EKYTWK+YS+RL+TLTGVYGFWK+VSNL+R E+RRYLEMFYALKYR LA +VPLAV+
Sbjct:  569 IFSMARLDRVKNMTGLVEMYGKNAHLKDLANLVIVAGDHGKESKDREEQAEFKRMYSLIEEYKLKGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAFYEAFGLTVIEAMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVNFFEKSTADPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 801
[Close]
BLAST of CX671416 vs. ExPASy Swiss-Prot
Match: SUS2_TULGE (Sucrose synthase 2 OS=Tulipa gesneriana PE=2 SV=1)

HSP 1 Score: 387.882 bits (995), Expect = 4.391e-107
Identity = 186/233 (79.83%), Postives = 210/233 (90.13%), Query Frame = -1 
Query:  218 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 916
            +F+MARLDRVKN+TGLVE Y KN +L+ELVNLVVV GD  K SKDLEEQAE+KKMYSLI++YKL+G  RWIS+QMNRVRNGELYRYI D+KG FVQPA YEAFGLTVVE+MTCGLPTFATC GGPAEIIV+G SGYHIDPYHG++AAE+LVDFFEK K D ++WD IS GGLKRI EKYTWKIYS+RLLTL GVYGFWK+VSNLDR E++RYLEMFYALKYR LA+SVPLAV+
Sbjct:  574 IFSMARLDRVKNMTGLVELYAKNDRLKELVNLVVVCGDHAKASKDLEEQAELKKMYSLIEEYKLDGHIRWISAQMNRVRNGELYRYIADSKGVFVQPAFYEAFGLTVVESMTCGLPTFATCHGGPAEIIVHGVSGYHIDPYHGDKAAELLVDFFEKSKKDQTHWDAISNGGLKRIYEKYTWKIYSERLLTLAGVYGFWKYVSNLDRRETKRYLEMFYALKYRNLAKSVPLAVD 806
[Close]
BLAST of CX671416 vs. ExPASy Swiss-Prot
Match: SUS2_ORYSJ (Sucrose synthase 2 OS=Oryza sativa subsp. japonica GN=SUS2 PE=1 SV=2)

HSP 1 Score: 384.8 bits (987), Expect = 3.717e-106
Identity = 181/233 (77.68%), Postives = 205/233 (87.98%), Query Frame = -1 
Query:  218 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 916
            +F+MARLDRVKN+TGLVE YGKNA LR+L NLV+V GD   +SKD EEQAE KKMY LIDQYKL G  RWIS+QMNRVRNGELYRYICDTKG FVQPA YEAFGLTV+EAMTCGLPT ATC GGPAEIIV+G SG HIDPYH ++AA+ILV+FFEKCK D +YWD IS GGL+RI EKYTWK+YS+RL+TLTGVYGFWK+VSNL+R E+RRY+EMFYALKYR LA +VPLAV+
Sbjct:  570 IFSMARLDRVKNMTGLVEMYGKNAHLRDLANLVIVCGDHGNQSKDREEQAEFKKMYGLIDQYKLKGHIRWISAQMNRVRNGELYRYICDTKGVFVQPAFYEAFGLTVIEAMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVNFFEKCKQDSTYWDNISQGGLQRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYIEMFYALKYRSLASAVPLAVD 802
[Close]
BLAST of CX671416 vs. ExPASy Swiss-Prot
Match: SUS2_MAIZE (Sucrose synthase 2 OS=Zea mays GN=SUS1 PE=1 SV=1)

HSP 1 Score: 383.259 bits (983), Expect = 1.082e-105
Identity = 182/233 (78.11%), Postives = 208/233 (89.27%), Query Frame = -1 
Query:  218 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 916
            +F+MARLDRVKNLTGLVE YG+N +L+ELVNLVVV GD    SKD EEQAE KKM+ LI+QY LNG  RWIS+QMNRVRNGELYRYICDTKGAFVQPA YEAFGLTVVEAMTCGLPTFAT  GGPAEIIV+G SGYHIDPY G++A+ +LVDFF+KC+A+PS+W KIS GGL+RIEEKYTWK+YS+RL+TLTGVYGFWK+VSNL+R E+RRYLEM YALKYR +A +VPLAVE
Sbjct:  578 IFSMARLDRVKNLTGLVELYGRNKRLQELVNLVVVCGDHGNPSKDKEEQAEFKKMFDLIEQYNLNGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATAYGGPAEIIVHGVSGYHIDPYQGDKASALLVDFFDKCQAEPSHWSKISQGGLQRIEEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYALKYRTMASTVPLAVE 810
[Close]
BLAST of CX671416 vs. ExPASy Swiss-Prot
Match: SUS1_ORYSJ (Sucrose synthase 1 OS=Oryza sativa subsp. japonica GN=SUS1 PE=1 SV=1)

HSP 1 Score: 381.333 bits (978), Expect = 4.110e-105
Identity = 181/233 (77.68%), Postives = 207/233 (88.84%), Query Frame = -1 
Query:  218 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 916
            +F+MARLDRVKNLTGLVE YG+N +L+ELVNLVVV GD    SKD EEQAE KKM+ LI+QY LNG  RWIS+QMNRVRNGELYRYICDTKGAFVQPA YEAFGLTVVE+MTCGLPTFAT  GGPAEIIVNG SG+HIDPY G++A+ +LV+FFEKC+ DPS+W KIS GGL+RIEEKYTWK+YS+RL+TLTGVYGFWK+VSNL+R E+RRYLEM YALKYR +A +VPLAVE
Sbjct:  578 IFSMARLDRVKNLTGLVELYGRNPRLQELVNLVVVCGDHGNPSKDKEEQAEFKKMFDLIEQYNLNGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAFYEAFGLTVVESMTCGLPTFATAYGGPAEIIVNGVSGFHIDPYQGDKASALLVEFFEKCQEDPSHWTKISQGGLQRIEEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYALKYRTMASTVPLAVE 810
[Close]
BLAST of CX671416 vs. ExPASy Swiss-Prot
Match: SUS3_ORYSJ (Sucrose synthase 3 OS=Oryza sativa subsp. japonica GN=SUS3 PE=1 SV=2)

HSP 1 Score: 378.637 bits (971), Expect = 2.664e-104
Identity = 178/233 (76.39%), Postives = 209/233 (89.70%), Query Frame = -1 
Query:  218 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 916
            +F+MARLD VKNLTGLVE YG+N +L+ELVNLVVV GD  KESKD EEQAE KKM++LI+QY LNG  RWIS+QMNRVRNGELYRYICD +GAFVQPALYEAFGLTV+EAMTCGLPTFAT  GGPAEIIV+G SGYHIDPY  ++A+ +LV+FFEKC+ DP++W KIS GGL+RIEEKYTWK+YS+RL+TL+GVYGFWK+V+NLDR E+RRYLEM YALKYRK+A +VPLA+E
Sbjct:  578 IFSMARLDHVKNLTGLVELYGRNPRLQELVNLVVVCGDHGKESKDKEEQAEFKKMFNLIEQYNLNGHIRWISAQMNRVRNGELYRYICDMRGAFVQPALYEAFGLTVIEAMTCGLPTFATAYGGPAEIIVHGVSGYHIDPYQNDKASALLVEFFEKCQEDPNHWIKISQGGLQRIEEKYTWKLYSERLMTLSGVYGFWKYVTNLDRRETRRYLEMLYALKYRKMATTVPLAIE 810
[Close]
BLAST of CX671416 vs. ExPASy Swiss-Prot
Match: SUS2_HORVU (Sucrose synthase 2 OS=Hordeum vulgare GN=SS2 PE=1 SV=1)

HSP 1 Score: 374.015 bits (959), Expect = 6.561e-103
Identity = 177/233 (75.97%), Postives = 205/233 (87.98%), Query Frame = -1 
Query:  218 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 916
            +F+MARLDRVKN+TGLVE YG+N +L+ELVNLVVV GD  K SKD EEQ E KKM+ LI++Y L+G  RWIS+QMNRVRNGELYRYICD KGAFVQPA YEAFGLTV+EAMTCGLPTFAT  GGPAEIIVNG SGYHIDPY  ++A+ +LV FF KC+ DPS+W+KIS GGL+RIEEKYTWK+YS+RL+TL+GVYGFWK+VSNLDR E+RRYLEM YALKYRK+A +VPLAVE
Sbjct:  578 IFSMARLDRVKNMTGLVEMYGRNPRLQELVNLVVVCGDHGKVSKDKEEQVEFKKMFDLIEKYNLSGHIRWISAQMNRVRNGELYRYICDMKGAFVQPAFYEAFGLTVIEAMTCGLPTFATAYGGPAEIIVNGVSGYHIDPYQNDKASALLVGFFGKCQEDPSHWNKISQGGLQRIEEKYTWKLYSERLMTLSGVYGFWKYVSNLDRRETRRYLEMLYALKYRKMAATVPLAVE 810
The following BLAST results are available for this feature:
BLAST of CX671416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SUS2_DAUCA1.193e-11283.26Sucrose synthase isoform 2 OS=Daucus carota PE=2 S... [more]
SUS1_MAIZE6.127e-10978.97Sucrose synthase 1 OS=Zea mays GN=SH-1 PE=2 SV=1[more]
SUS1_TULGE1.045e-10879.40Sucrose synthase 1 OS=Tulipa gesneriana PE=2 SV=1[more]
SUS1_HORVU5.187e-10879.40Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 ... [more]
SUS2_TULGE4.391e-10779.83Sucrose synthase 2 OS=Tulipa gesneriana PE=2 SV=1[more]
SUS2_ORYSJ3.717e-10677.68Sucrose synthase 2 OS=Oryza sativa subsp. japonica... [more]
SUS2_MAIZE1.082e-10578.11Sucrose synthase 2 OS=Zea mays GN=SUS1 PE=1 SV=1[more]
SUS1_ORYSJ4.110e-10577.68Sucrose synthase 1 OS=Oryza sativa subsp. japonica... [more]
SUS3_ORYSJ2.664e-10476.39Sucrose synthase 3 OS=Oryza sativa subsp. japonica... [more]
SUS2_HORVU6.561e-10375.97Sucrose synthase 2 OS=Hordeum vulgare GN=SS2 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_10H10_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-10H10-O20-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671416 ID=CX671416; Name=CX671416; organism=Citrus sinensis; type=EST; length=916bp
GCAAACTATAATGGAATTGATGAGGGTGGAACACCCAAAAGTACAAACAA
TGCTGAGAAAGCAAAAAGGCAAAAAAAAATTGGAAAAAAGAAAATTTAAC
GGGGGGAAAAAAGTCTTTGTCCAATCGCAATCCCGGAAGCGACATTATTC
TCCACAACTCAAGAAACCTCCACTCGGACCAACCACCCTGAGAGCTTCCC
TCAATGTCCATTTACTCCTCCACAGCCAGAGGAACAGATTCAGCCAGCTT
ACGGTACTTGAGAGCATAAAACATTTCAAGGTATCGACGGCTCTCAAGAC
GATCAAGGTTAGATACATGTTTCCAGAACCCATAGACTCCAGTCAGGGTC
AGAAGCCTCTGAGAGTAAATTTTCCATGTATACTTCTCTTCAATACGCTT
CAGGCCACCCAGTGATATCTTGTCCCAGTATGAGGGATCTGCCTTGCACT
TCTCAAAGAAGTCAACAAGGATCTCAGCAGCCTGCTCACCATGGTAAGGA
TCAATGTGGTAGCCAGATTTCCCGTTAACGATAATCTCAGCGGGGCCACC
CTTGCAAGTTGCAAATGTTGGCAATCCACAGGTCATGGCCTCAACAACAG
TCAAGCCAAAGGCCTCATACAGTGCAGGTTGCACAAAAGCTCCCTTTGTA
TCACAAATGTACCGGTACAATTCACCGTTCCTGACCCGATTCATCTGAGA
TGAGATCCATCGGAACTGGCCATTCAATTTGTATTGATCAATGAGGGAAT
ACATCTTCTTCATTTCAGCCTGTTCTTCCAAGTCCTTGGACTCCTTTCTC
CTATCACCACCCACTACGACTAAGTTAACCAACTCACGTAGCTTAGCATT
CTTTCCATACCACTCCACAAGCCCAGTCAAATTCTTAACACGGTCCAATC
TTGCCATTGTAAACAG
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