CX671401
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671401 vs. ExPASy Swiss-Prot
Match: C3H5_ORYSJ (Zinc finger CCCH domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=Os01g0257400 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.356e-28 Identity = 75/204 (36.76%), Postives = 104/204 (50.98%), Query Frame = 2 Query: 41 LPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNL------IYSSRNQGDLGA---GAQMHILSASSQN---------LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH-----------------PYAGYPINY 544 L W + R P L S L G SY P+++ + +VP GWN Y I P++ + AG + Y +QG A G+Q LS+S+ P RP QP+C+YY+ TG+CK+G+ CK+HHP+ + + PLGLP RPG C+ Y+ +G CKFGPTC+FDH P A YP+NY Sbjct: 200 LAGWQMGRPPVLPGSFLSG--SYPPMMLPST--VVPMQGWNPY---ISPVNQVASAGGHQTVQAGPFYGLSHQGPSAAVTYGSQYAPLSSSTMPSSSSKQEPAFPARPGQPECQYYLKTGSCKFGSACKYHHPQYLNTPKSNCMLSPLGLPLRPGSQPCAYYTQHGFCKFGPTCKFDHPMGTLSYSPSASSITDLPIAPYPLNY 396 HSP 2 Score: 90.8929 bits (224), Expect = 7.015e-18 Identity = 40/99 (40.40%), Postives = 56/99 (56.57%), Query Frame = 2 Query: 245 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG----PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 529 LG G + ++ LPERP + DC YY+ TG C YG +C+++HP++R A + + G P RPGQ +C Y G CKFG C++DHP G Sbjct: 32 LGGGGGGGGEAVAAGRLPERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVLNGGGKTTHSAEYPERPGQPVCEYYMKNGTCKFGSNCKYDHPREG 130 HSP 3 Score: 90.1225 bits (222), Expect = 1.197e-17 Identity = 43/94 (45.74%), Postives = 52/94 (55.32%), Query Frame = 2 Query: 248 GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 529 G G H S PERP QP C YYM GTCK+G++CK+ HP+E Q+ N G P R G+ C+ Y G CKFG TC+F HP G Sbjct: 88 GGGKTTH-----SAEYPERPGQPVCEYYMKNGTCKFGSNCKYDHPREGSVQAVMLNSS--GYPLRSGEKDCTYYVKTGHCKFGSTCKFHHPEIG 174
BLAST of CX671401 vs. ExPASy Swiss-Prot
Match: C3H58_ARATH (Zinc finger CCCH domain-containing protein 58 OS=Arabidopsis thaliana GN=At5g18550 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.841e-27 Identity = 60/162 (37.04%), Postives = 92/162 (56.79%), Query Frame = 2 Query: 80 SRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-SPTS--IAGSNLIYS----SRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINY 544 S +Q Y +++ P G+VP GWN Y ++ + SP + G++ +Y S + +G +S Q P+RP+QP+C+Y+M TG CK+G C+FHHP E A AS + +GLP RPG C++++ +GICKFGP C+FDH ++Y Sbjct: 221 SYVQSPYGYGQMVLPP--GMVPYSGWNPYQASVSAMPSPGTQPSMGTSSVYGITPLSPSAPAYQSGPSSTGVSNKEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHHPME-AASPEASTLSHIGLPLRPGAVPCTHFAQHGICKFGPACKFDHSLGSSSLSY 379 HSP 2 Score: 87.8113 bits (216), Expect = 5.938e-17 Identity = 37/85 (43.53%), Postives = 53/85 (62.35%), Query Frame = 2 Query: 272 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAAS--NIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 520 L + PER QP C+++M TGTCK+GA CK+HHP++ + + ++ +G P RPG+ CS + G CKFG TCR+ HP Sbjct: 87 LRTEAGEFPERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVSLNYMGFPLRPGEKECSYFMRTGQCKFGSTCRYHHP 171 HSP 3 Score: 87.4261 bits (215), Expect = 7.756e-17 Identity = 34/81 (41.98%), Postives = 47/81 (58.02%), Query Frame = 2 Query: 287 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 529 + PERPD+PDC YY+ TG C YG+ C+F+HP+ R P R GQ +C ++ G CKFG +C++ HP G Sbjct: 46 ETFPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRAPVLGGLRTEAGEFPERMGQPVCQHFMRTGTCKFGASCKYHHPRQG 126
BLAST of CX671401 vs. ExPASy Swiss-Prot
Match: C3H34_ARATH (Zinc finger CCCH domain-containing protein 34 OS=Arabidopsis thaliana GN=At3g06410 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 8.267e-27 Identity = 67/178 (37.64%), Postives = 98/178 (55.06%), Query Frame = 2 Query: 8 LPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-SPTS--IAGSNLIY-----SSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 517 +PSS QY L S YL S Y P +V P G+VP GWN Y ++ + SP + GS+ IY S G + +++S+ P+RPDQP+C+Y+M TG CK+G+ C++HHP + + + +GLP RPG A C++++ +GICKFGP C+FDH Sbjct: 209 IPSSQ-QYGLVLTRPSFLTGSYLQS------PYGPPMVLPP-GMVPYSGWNPYQASLSAMPSPGTQPSIGSSSIYGLTPLSPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDH 378 HSP 2 Score: 89.3521 bits (220), Expect = 2.041e-17 Identity = 39/78 (50.00%), Postives = 52/78 (66.67%), Query Frame = 2 Query: 293 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAAS--NIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 520 LPER P C+++M TGTCK+GA CK+HHP++ + + ++ LG P RPG+ CS Y G CKFG TCRF+HP Sbjct: 97 LPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYPLRPGEKECSYYLRTGQCKFGLTCRFNHP 174 HSP 3 Score: 88.9669 bits (219), Expect = 2.666e-17 Identity = 39/102 (38.24%), Postives = 55/102 (53.92%), Query Frame = 2 Query: 287 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP---------------YAGYPINYG 547 ++ PERPD+PDC YY+ TG C YG+ C+F+HP++R A LP R G +C ++ G CKFG +C++ HP Y GYP+ G Sbjct: 49 ESYPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYPLRPG 150
BLAST of CX671401 vs. ExPASy Swiss-Prot
Match: C3H6_ORYSJ (Zinc finger CCCH domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=Os01g0258700 PE=2 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 2.659e-25 Identity = 63/178 (35.39%), Postives = 94/178 (52.81%), Query Frame = 2 Query: 38 SLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNL----IYSSRNQGDLGA----GAQMHILSASSQN--------LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 520 SL W + R P + S + G SY P+++S G++P GW+ Y ++ P+ A N+ +Y + G G + S++ Q+ PERP QPDC+YYM TG CK+GA CK+HHP+E A + + L LP RPG C+ Y+ G C++G C++DHP Sbjct: 207 SLANWQMGRPPVVPGSYIPG--SYTPMMLS--SGMIPLQGWSPYPASVNPVVSGG-AQQNVQAGPVYGMGHHGSSSTIAYGGPYVPYASSTGQSSNNQQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHP 379 HSP 2 Score: 92.8189 bits (229), Expect = 1.846e-18 Identity = 47/107 (43.93%), Postives = 62/107 (57.94%), Query Frame = 2 Query: 230 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP-YAGYPINYG 547 R + G GA+ +A++ + PER QP C YYM TGTCK+G +CK+HHPK+ A + G P R G+ CS Y G CKFG TC+F HP + G P+ G Sbjct: 88 RGGTEFGGGAR----NAAALDYPERAGQPICEYYMKTGTCKFGTNCKYHHPKQDGAVLPVM-LNNSGFPIRLGEKECSYYMKTGQCKFGTTCKFHHPEFGGVPMTPG 189 HSP 3 Score: 82.4185 bits (202), Expect = 2.495e-15 Identity = 39/100 (39.00%), Postives = 51/100 (51.00%), Query Frame = 2 Query: 293 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQ---SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP------------YAGYPINYG 547 LPERP + DC YY+ TG C +G C+++HP++R A N L P R GQ IC Y G CKFG C++ HP +G+PI G Sbjct: 56 LPERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPICEYYMKTGTCKFGTNCKYHHPKQDGAVLPVMLNNSGFPIRLG 155
BLAST of CX671401 vs. ExPASy Swiss-Prot
Match: C3H57_ARATH (Zinc finger CCCH domain-containing protein 57 OS=Arabidopsis thaliana GN=ZFN3 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 2.940e-24 Identity = 63/177 (35.59%), Postives = 91/177 (51.41%), Query Frame = 2 Query: 17 SGLQYAGSLPTWSLQRAPYLSS--RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPIN 541 S LQ P++S R ++++ RLQ + S SQG + + G+++ GN PL ++ N+ PERP QP+C++YM TG CK+G CKFHHP++R + +GLP RPG+ +C YS YGICKFGP+C+FDHP + N Sbjct: 177 SALQSLTGQPSYSWSRTSFVANPPRLQDPSGF----ASGSQGGLFSSGFHS--GNSVPLGFYALPRENVF-------------------------PERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYN 322 HSP 2 Score: 90.1225 bits (222), Expect = 1.197e-17 Identity = 35/75 (46.67%), Postives = 48/75 (64.00%), Query Frame = 2 Query: 296 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 520 PER QP+C +Y+ TGTCK+G CKFHHP+ + + ++ L P RP + CS + G CKFG TC+F+HP Sbjct: 85 PERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHP 159 HSP 3 Score: 78.5666 bits (192), Expect = 3.603e-14 Identity = 35/75 (46.67%), Postives = 45/75 (60.00%), Query Frame = 2 Query: 296 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 520 PER +PDC YY+ TG C++G+ C+F+HP +R A + I P R GQ C Y G CKFG TC+F HP Sbjct: 40 PERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKG-EYPERIGQPECEFYLKTGTCKFGVTCKFHHP 113
BLAST of CX671401 vs. ExPASy Swiss-Prot
Match: C3H65_ORYSJ (Zinc finger CCCH domain-containing protein 65 OS=Oryza sativa subsp. japonica GN=Os12g0278800 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.489e-23 Identity = 49/139 (35.25%), Postives = 75/139 (53.96%), Query Frame = 2 Query: 125 PSQGIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 538 P QG+ P P WN Y + P P + + + N A S+ PERP QP+C++++ +G CK+ CK+HHP+ + + A + PLGLP +P Q +C+ Y YG+CKFGP C ++HP+ P+ Sbjct: 373 PPQGMYPPPEWNGYHQVPLNPYYPPGVPFQHFPAAPINHPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGA--LSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHPFNFSPV 509
BLAST of CX671401 vs. ExPASy Swiss-Prot
Match: C3H13_ARATH (Zinc finger CCCH domain-containing protein 13 OS=Arabidopsis thaliana GN=At1g48195 PE=4 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.190e-21 Identity = 40/79 (50.63%), Postives = 51/79 (64.56%), Query Frame = 2 Query: 281 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 517 S + PERP +P+C YY+ TG C +CK+HHPK + GLP RPGQAIC +YS +GIC+ GPTC+FDH Sbjct: 2 SEEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICPHYSRFGICRSGPTCKFDH 80
BLAST of CX671401 vs. ExPASy Swiss-Prot
Match: C3H37_ARATH (Zinc finger CCCH domain-containing protein 37 OS=Arabidopsis thaliana GN=HUA1 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.547e-17 Identity = 49/131 (37.40%), Postives = 66/131 (50.38%), Query Frame = 2 Query: 158 NTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA-------QSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 529 NT N+G ++P + Y + Q LG ++SA+ P+RP Q +C YYM TG CK+G CKFHHP +R++ Q + G P R G C Y G CK+G TC+FDHP G Sbjct: 386 NTANLNLGLVTPATS-----FYQTLTQPTLG------VISAT---YPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHPPPG 502 HSP 2 Score: 87.4261 bits (215), Expect = 7.756e-17 Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = 2 Query: 284 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 520 ++ PERP +PDC YY+ T CKYG+ CKF+HP+E A S + LP RP + +C+ Y G CKFG +C+F HP Sbjct: 219 NEEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQD---SLPERPSEPMCTFYMKTGKCKFGLSCKFHHP 294 HSP 3 Score: 83.5741 bits (205), Expect = 1.120e-15 Identity = 40/106 (37.74%), Postives = 53/106 (50.00%), Query Frame = 2 Query: 281 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG--------------------------PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 520 + +LPERP +P C +YM TG CK+G CKFHHPK+ S++ +IG GLP R G+ C Y G CK+G TCR++HP Sbjct: 261 TQDSLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHP 366
BLAST of CX671401 vs. ExPASy Swiss-Prot
Match: C3H43_ORYSJ (Zinc finger CCCH domain-containing protein 43 OS=Oryza sativa subsp. japonica GN=Os06g0520600 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.947e-16 Identity = 40/103 (38.83%), Postives = 55/103 (53.40%), Query Frame = 2 Query: 284 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP--------KERIAQSAAS-------------NIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 529 ++ P RP +PDC YY+ G+CK+G +C+F+HP +E + +A + LGLP RPG +CS Y GICKFG C+FDHP G Sbjct: 84 AEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSKVEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHPDPG 186 HSP 2 Score: 82.8037 bits (203), Expect = 1.910e-15 Identity = 34/75 (45.33%), Postives = 43/75 (57.33%), Query Frame = 2 Query: 296 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 520 P RP +PDC YY+ G+CK+G C ++HP R A P RPG+ CS Y +G CKFG CRF+HP Sbjct: 42 PRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHP 116
BLAST of CX671401 vs. ExPASy Swiss-Prot
Match: C3H42_ORYSJ (Zinc finger CCCH domain-containing protein 42 OS=Oryza sativa subsp. japonica GN=Os06g0519400 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.575e-16 Identity = 40/98 (40.82%), Postives = 54/98 (55.10%), Query Frame = 2 Query: 296 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQ------------------SAASNI--GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 529 P+RP + DC +Y+ G CKYG +C+F+HP +R+ Q S A ++ LGLP RPG +CS Y GICKFG C+F HP +G Sbjct: 118 PQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVKLNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHPNSG 215 HSP 2 Score: 77.0258 bits (188), Expect = 1.048e-13 Identity = 33/78 (42.31%), Postives = 44/78 (56.41%), Query Frame = 2 Query: 287 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 520 Q P RP PDC YY+ G+CK+G C ++HP + A L P RPG+ C +Y +G CK+G CRF+HP Sbjct: 74 QEYPRRPGVPDCSYYVEFGSCKFGMRCLYNHPAKH-----AGGCDKLEHPQRPGEHDCLHYLRFGRCKYGMNCRFNHP 146 The following BLAST results are available for this feature:
BLAST of CX671401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671401 ID=CX671401; Name=CX671401; organism=Citrus sinensis; type=EST; length=696bpback to top |