FC871755
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871755 vs. ExPASy Swiss-Prot
Match: PABP1_HUMAN (Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1 PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.648e-21 Identity = 45/80 (56.25%), Postives = 61/80 (76.25%), Query Frame = 2 Query: 422 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDP 661 SLYVGDL +VT++ LY+ F+ G ++S+RVCRD+ TRRSLGY YVNF +A RAL+ +NF + GKP+R+M+S RDP Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDP 91
BLAST of FC871755 vs. ExPASy Swiss-Prot
Match: PABP1_BOVIN (Polyadenylate-binding protein 1 OS=Bos taurus GN=PABPC1 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.648e-21 Identity = 45/80 (56.25%), Postives = 61/80 (76.25%), Query Frame = 2 Query: 422 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDP 661 SLYVGDL +VT++ LY+ F+ G ++S+RVCRD+ TRRSLGY YVNF +A RAL+ +NF + GKP+R+M+S RDP Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDP 91
BLAST of FC871755 vs. ExPASy Swiss-Prot
Match: EPAB_XENTR (Embryonic polyadenylate-binding protein OS=Xenopus tropicalis GN=epabp PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.648e-21 Identity = 44/80 (55.00%), Postives = 62/80 (77.50%), Query Frame = 2 Query: 422 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDP 661 SLYVGDL +VT++ LY+ F+ G ++S+RVCRD++TRRSLGY Y+NF +A RAL+ +NF + G+PIR+M+S RDP Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDP 91
BLAST of FC871755 vs. ExPASy Swiss-Prot
Match: EPABB_XENLA (Embryonic polyadenylate-binding protein B OS=Xenopus laevis GN=epabp-B PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.152e-21 Identity = 43/80 (53.75%), Postives = 62/80 (77.50%), Query Frame = 2 Query: 422 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDP 661 SLY+GDL +VT++ LY+ F+ G ++S+RVCRD++TRRSLGY Y+NF +A RAL+ +NF + G+PIR+M+S RDP Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDP 91
BLAST of FC871755 vs. ExPASy Swiss-Prot
Match: PABP_NEUCR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neurospora crassa GN=pab-1 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.811e-21 Identity = 44/82 (53.66%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 416 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDP 661 + SLYVG+L+ +VT++ L++LF+Q+G V S+RVCRD TRRSLGY YVN++ + +ALE LN+T + G+P R+M+S RDP Sbjct: 59 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEELNYTLIKGRPCRIMWSQRDP 140
BLAST of FC871755 vs. ExPASy Swiss-Prot
Match: PABP_MAGGR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Magnaporthe grisea GN=PAB1 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.811e-21 Identity = 44/82 (53.66%), Postives = 64/82 (78.05%), Query Frame = 2 Query: 416 TTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDP 661 + SLYVG+L+ +VT++ L++LF+Q+G V S+RVCRD TRRSLGY YVN++ + +ALE LN+T + G+P R+M+S RDP Sbjct: 60 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEELNYTLIKGRPCRIMWSQRDP 141
BLAST of FC871755 vs. ExPASy Swiss-Prot
Match: PABP_USTMA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago maydis GN=PAB1 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.671e-21 Identity = 44/81 (54.32%), Postives = 63/81 (77.78%), Query Frame = 2 Query: 419 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDP 661 TSLYVG+L+ +VT++ L+++F+ +G V S+RVCRD TRRSLGY YVNF NA + RA+E LN++ + +P R+M+S RDP Sbjct: 47 TSLYVGELDPSVTEAMLFEIFSMIGTVASIRVCRDAVTRRSLGYAYVNFLNAADGERAMEQLNYSLIRNRPCRIMWSQRDP 127
BLAST of FC871755 vs. ExPASy Swiss-Prot
Match: PABPA_XENLA (Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-A PE=1 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 3.671e-21 Identity = 44/80 (55.00%), Postives = 61/80 (76.25%), Query Frame = 2 Query: 422 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDP 661 SLYVGDL +VT++ LY+ F+ G ++S+RVCRD+ TRRSLGY YVNF +A RAL+ +NF + G+P+R+M+S RDP Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPVRIMWSQRDP 91
BLAST of FC871755 vs. ExPASy Swiss-Prot
Match: PABP1_PONAB (Polyadenylate-binding protein 1 OS=Pongo abelii GN=PABPC1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.794e-21 Identity = 44/80 (55.00%), Postives = 60/80 (75.00%), Query Frame = 2 Query: 422 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDP 661 SLYVGDL + T++ LY+ F+ G ++S+RVCRD+ TRRSLGY YVNF +A RAL+ +NF + GKP+R+M+S RDP Sbjct: 12 SLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDP 91
BLAST of FC871755 vs. ExPASy Swiss-Prot
Match: EPABA_XENLA (Embryonic polyadenylate-binding protein A OS=Xenopus laevis GN=epabp-A PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.068e-20 Identity = 42/80 (52.50%), Postives = 61/80 (76.25%), Query Frame = 2 Query: 422 SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDP 661 SLY+GDL +VT++ LY+ F+ G ++S+RVCRD++TRRSL Y Y+NF +A RAL+ +NF + G+PIR+M+S RDP Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDP 91 The following BLAST results are available for this feature:
BLAST of FC871755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871755 ID=FC871755; Name=FC871755; organism=Citrus sinensis; type=EST; length=669bpback to top |