EG358266

Overview
NameEG358266
Unique NameEG358266
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length172
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358266 vs. ExPASy Swiss-Prot
Match: CHSY_PERFR (Chalcone synthase OS=Perilla frutescens GN=CHS PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.020e-24
Identity = 52/57 (91.23%), Postives = 55/57 (96.49%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 172
            P+LGKEAA +AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKR MM
Sbjct:  103 PKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRFMM 159          
BLAST of EG358266 vs. ExPASy Swiss-Prot
Match: CHSA_PETHY (Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.020e-24
Identity = 52/57 (91.23%), Postives = 55/57 (96.49%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 172
            P+LGKEAA +AIKEWGQPKSKITHLVFCTTSGVDMPG DY+LTKLLGLRPSVKRLMM
Sbjct:  103 PKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGCDYQLTKLLGLRPSVKRLMM 159          
BLAST of EG358266 vs. ExPASy Swiss-Prot
Match: CHS6_IPOBA (Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DII PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.020e-24
Identity = 52/57 (91.23%), Postives = 55/57 (96.49%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 172
            P+LGKEAA  AIKEWGQPKSKITH+VFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  103 PKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 159          
BLAST of EG358266 vs. ExPASy Swiss-Prot
Match: CHS4_IPOBA (Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF4 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.020e-24
Identity = 52/57 (91.23%), Postives = 55/57 (96.49%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 172
            P+LGKEAA  AIKEWGQPKSKITH+VFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  103 PKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 159          
BLAST of EG358266 vs. ExPASy Swiss-Prot
Match: CHSY_PINST (Chalcone synthase OS=Pinus strobus GN=CHS PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.638e-24
Identity = 50/57 (87.72%), Postives = 56/57 (98.25%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 172
            PRLGKEAA +AIKEWGQPKSKITH++FCTTSGVDMPGADY++TKLLGLRPSVKR+MM
Sbjct:  108 PRLGKEAAAKAIKEWGQPKSKITHVIFCTTSGVDMPGADYQMTKLLGLRPSVKRVMM 164          
BLAST of EG358266 vs. ExPASy Swiss-Prot
Match: CHSD_IPONI (Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.638e-24
Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 172
            P+LGKEAA  AIKEWGQPKSKITH++FCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  103 PKLGKEAAQSAIKEWGQPKSKITHVIFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 159          
BLAST of EG358266 vs. ExPASy Swiss-Prot
Match: CHSB_PEA (Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.638e-24
Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 172
            P+LGKEAAT+AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MM
Sbjct:  103 PKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPHVKRYMM 159          
BLAST of EG358266 vs. ExPASy Swiss-Prot
Match: CHS8_IPOBA (Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DIV PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.638e-24
Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 172
            P+LGKEAA  AIKEWGQPKSKITH+VFCTTSG+DMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  103 PKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGIDMPGADYQLTKLLGLRPSVKRLMM 159          
BLAST of EG358266 vs. ExPASy Swiss-Prot
Match: CHS1_IPOBA (Chalcone synthase LF1 OS=Ipomoea batatas GN=CHS-LF1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.638e-24
Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 172
            P+LGKEAA  AIKEWGQPKSKITH+VFCTTSG+DMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  103 PKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGIDMPGADYQLTKLLGLRPSVKRLMM 159          
BLAST of EG358266 vs. ExPASy Swiss-Prot
Match: CHSY_CHRAE (Chalcone synthase OS=Chrysosplenium americanum GN=CHS PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.445e-24
Identity = 52/56 (92.86%), Postives = 55/56 (98.21%), Query Frame = 2
Query:    5 RLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 172
            +LGKEAA +AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMM
Sbjct:  107 KLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMM 162          
The following BLAST results are available for this feature:
BLAST of EG358266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CHSY_PERFR2.020e-2491.23Chalcone synthase OS=Perilla frutescens GN=CHS PE=... [more]
CHSA_PETHY2.020e-2491.23Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=... [more]
CHS6_IPOBA2.020e-2491.23Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DI... [more]
CHS4_IPOBA2.020e-2491.23Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF... [more]
CHSY_PINST2.638e-2487.72Chalcone synthase OS=Pinus strobus GN=CHS PE=2 SV=... [more]
CHSD_IPONI2.638e-2489.47Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV... [more]
CHSB_PEA2.638e-2489.47Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE... [more]
CHS8_IPOBA2.638e-2489.47Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DI... [more]
CHS1_IPOBA2.638e-2489.47Chalcone synthase LF1 OS=Ipomoea batatas GN=CHS-LF... [more]
CHSY_CHRAE3.445e-2492.86Chalcone synthase OS=Chrysosplenium americanum GN=... [more]

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Properties
Property NameValue
Genbank description11a8 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0011a8, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358266 ID=EG358266; Name=EG358266; organism=Citrus sinensis; type=EST; length=172bp
ACCGAGGCTCGGCAAAGAAGCGGCCACCGAGGCCATTAAAGAATGGGGCC
AGCCCAAGTCCAAAATCACCCACTTGGTCTTTTGCACCACTAGTGGAGTT
GACATGCCCGGGGCCGATTACCGGCTCACAAAACTCTTGGGCCTTCGCCC
ATCCGTCAAACGTCTCATGATG
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