EG358266

Overview
NameEG358266
Unique NameEG358266
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length172
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358266 vs. ExPASy Swiss-Prot
Match: CHS2_MEDSA (Chalcone synthase 2 OS=Medicago sativa GN=CHS2 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.809e-23
Identity = 50/57 (87.72%), Postives = 53/57 (92.98%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 172
            PRLGKEAA +AIKEWGQPKSKITHL+ CTTSGVDMPGADY+LTKLLGLRP VKR MM
Sbjct:  103 PRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMM 159          
BLAST of EG358266 vs. ExPASy Swiss-Prot
Match: CHSY_DIAMO (Chalcone synthase OS=Dianthus monspessulanus GN=CHS PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 4.974e-23
Identity = 48/57 (84.21%), Postives = 54/57 (94.74%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 172
            PRLGKEAA +AIKEWGQPKSKITH++ CTTSGVDMPGADY+LTKLLGLRPSV+R M+
Sbjct:  103 PRLGKEAAVKAIKEWGQPKSKITHVIMCTTSGVDMPGADYQLTKLLGLRPSVRRFML 159          
BLAST of EG358266 vs. ExPASy Swiss-Prot
Match: CHSY_DIACA (Chalcone synthase OS=Dianthus caryophyllus GN=CHS PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 4.974e-23
Identity = 48/57 (84.21%), Postives = 54/57 (94.74%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 172
            PRLGKEAA +AIKEWGQPKSKITH++ CTTSGVDMPGADY+LTKLLGLRPSV+R M+
Sbjct:  103 PRLGKEAAVKAIKEWGQPKSKITHVIMCTTSGVDMPGADYQLTKLLGLRPSVRRFML 159          
BLAST of EG358266 vs. ExPASy Swiss-Prot
Match: CHSY_CATRO (Chalcone synthase OS=Catharanthus roseus GN=CHS PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 4.974e-23
Identity = 51/57 (89.47%), Postives = 54/57 (94.74%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 172
            P+LGKEAA +AIKEWGQ KSKITHLVFCTTSGVDMPGADY+LTKLLGLR SVKRLMM
Sbjct:  103 PKLGKEAAQKAIKEWGQSKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRLMM 159          
BLAST of EG358266 vs. ExPASy Swiss-Prot
Match: CHS7_SOYBN (Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.497e-23
Identity = 49/57 (85.96%), Postives = 53/57 (92.98%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 172
            P+LGKEAA +AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTK LGLRP VKR MM
Sbjct:  103 PKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKQLGLRPYVKRYMM 159          
BLAST of EG358266 vs. ExPASy Swiss-Prot
Match: CHSF_PETHY (Chalcone synthase F OS=Petunia hybrida GN=CHSF PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 1.108e-22
Identity = 50/57 (87.72%), Postives = 53/57 (92.98%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 172
            P+LGKEAA  AIKEWGQPKSKITHLVFCTT+GVDM GADY+LTKLLGL PSVKRLMM
Sbjct:  103 PKLGKEAAQNAIKEWGQPKSKITHLVFCTTTGVDMHGADYQLTKLLGLSPSVKRLMM 159          
BLAST of EG358266 vs. ExPASy Swiss-Prot
Match: CHS2_MAIZE (Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.108e-22
Identity = 49/57 (85.96%), Postives = 53/57 (92.98%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 172
            P+LGK AA +AIKEWGQPKS+ITHLVFCTTSGVDMPGADY+LTK LGLRPSV RLMM
Sbjct:  107 PKLGKAAAQKAIKEWGQPKSRITHLVFCTTSGVDMPGADYQLTKALGLRPSVNRLMM 163          
BLAST of EG358266 vs. ExPASy Swiss-Prot
Match: CHS6_MEDSA (Chalcone synthase 6-4 (Fragment) OS=Medicago sativa GN=CHS6-4 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.447e-22
Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 2
Query:    8 LGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 172
            LGKEAA +AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MM
Sbjct:    1 LGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMM 55          
BLAST of EG358266 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSJ (Chalcone synthase OS=Oryza sativa subsp. japonica GN=CHS PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.381e-22
Identity = 46/57 (80.70%), Postives = 53/57 (92.98%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 172
            P+LGK AA +AIKEWGQP+S+ITHLVFCTTSGVDMPGADY+L K+LGLRP+V RLMM
Sbjct:  106 PKLGKAAAQKAIKEWGQPRSRITHLVFCTTSGVDMPGADYQLAKMLGLRPNVNRLMM 162          
BLAST of EG358266 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSI (Chalcone synthase OS=Oryza sativa subsp. indica GN=CHS PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.381e-22
Identity = 46/57 (80.70%), Postives = 53/57 (92.98%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM 172
            P+LGK AA +AIKEWGQP+S+ITHLVFCTTSGVDMPGADY+L K+LGLRP+V RLMM
Sbjct:  106 PKLGKAAAQKAIKEWGQPRSRITHLVFCTTSGVDMPGADYQLAKMLGLRPNVSRLMM 162          
The following BLAST results are available for this feature:
BLAST of EG358266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CHS2_MEDSA3.809e-2387.72Chalcone synthase 2 OS=Medicago sativa GN=CHS2 PE=... [more]
CHSY_DIAMO4.974e-2384.21Chalcone synthase OS=Dianthus monspessulanus GN=CH... [more]
CHSY_DIACA4.974e-2384.21Chalcone synthase OS=Dianthus caryophyllus GN=CHS ... [more]
CHSY_CATRO4.974e-2389.47Chalcone synthase OS=Catharanthus roseus GN=CHS PE... [more]
CHS7_SOYBN6.497e-2385.96Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV... [more]
CHSF_PETHY1.108e-2287.72Chalcone synthase F OS=Petunia hybrida GN=CHSF PE=... [more]
CHS2_MAIZE1.108e-2285.96Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1[more]
CHS6_MEDSA1.447e-2289.09Chalcone synthase 6-4 (Fragment) OS=Medicago sativ... [more]
CHSY_ORYSJ9.381e-2280.70Chalcone synthase OS=Oryza sativa subsp. japonica ... [more]
CHSY_ORYSI9.381e-2280.70Chalcone synthase OS=Oryza sativa subsp. indica GN... [more]

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Properties
Property NameValue
Genbank description11a8 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0011a8, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358266 ID=EG358266; Name=EG358266; organism=Citrus sinensis; type=EST; length=172bp
ACCGAGGCTCGGCAAAGAAGCGGCCACCGAGGCCATTAAAGAATGGGGCC
AGCCCAAGTCCAAAATCACCCACTTGGTCTTTTGCACCACTAGTGGAGTT
GACATGCCCGGGGCCGATTACCGGCTCACAAAACTCTTGGGCCTTCGCCC
ATCCGTCAAACGTCTCATGATG
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