CX671364
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPB_YEAST (T-complex protein 1 subunit beta OS=Saccharomyces cerevisiae GN=CCT2 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.533e-30 Identity = 82/206 (39.81%), Postives = 127/206 (61.65%), Query Frame = 1 Query: 184 AQKANVSA---GKAVARILRTSLGPKGMDKMLQSPDGDVT-ITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERG-IHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL-EPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDK 783 A+ A +SA AV +++++LGPKGMDK+LQS + +TNDGATIL+ + +DN AK++V +S+ QD E+GDGTT V V++ LL +AEKL+++ IHP I EGY +AS A++ L + A E L+ TTL+SK++++ K AE+A A+L + + NL+ I++ +GG+L D+ L G + K Sbjct: 15 AENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRL----KGSTNLEHIQIIKILGGKLSDSFLDEGFILAK 216
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPA_SCHPO (T-complex protein 1 subunit alpha OS=Schizosaccharomyces pombe GN=cct1 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.002e-30 Identity = 74/194 (38.14%), Postives = 116/194 (59.79%), Query Frame = 1 Query: 166 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVN------LDLIKVEGK 729 ++ G D + NV A A+A ++++SLGP G+DKML GDVT+TNDGATIL +DV++ K++VEL++ QD E+GDGTT VV++A LL +A +L++ IHP I GY +A R AV+ + + L E L+ T+++SK++ + +AV A+L+V K ++++K GK Sbjct: 16 KISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFMTDVLSCSVDSLGK-ESLINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSNSKGETRYPVKAVNILKAHGK 208
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPG_YEAST (T-complex protein 1 subunit gamma OS=Saccharomyces cerevisiae GN=CCT3 PE=1 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 3.415e-30 Identity = 85/236 (36.02%), Postives = 141/236 (59.75%), Query Frame = 1 Query: 130 PFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQ-AEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLND--LEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDV--------NLDL-----IKVEGKVGGRLEDTELIYGITVDKDM 789 P + + +E R G AQ +N++A KAVA ++RT LGPK M KML P G + +TNDG IL ++DV + AK M+ELSR+QD E+GDGTT V+++AG +L Q A L+E+ IHP+ I + + A A+E ++++++ + ND ++ L+Q ++ +K V ++ E+A+ AV V RKD+ N ++ ++VE GG + D+ ++ G+ ++KD+ Sbjct: 4 PVVFMNASQE--RTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPAAKSMLELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVE-NDAAMKKLIQ---ASIGTKYVIHWSEKMCELALDAVKTV----RKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDV 229
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPB_RAT (T-complex protein 1 subunit beta OS=Rattus norvegicus GN=Cct2 PE=1 SV=3) HSP 1 Score: 132.109 bits (331), Expect = 3.415e-30 Identity = 79/195 (40.51%), Postives = 122/195 (62.56%), Query Frame = 1 Query: 214 AVARILRTSLGPKGMDKMLQSP--DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL---EPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDK 783 A+ +++++LGPKGMDK+L S D + +TNDGATIL+ + VDN AK++V++SR QD E+GDGTT V V+A LL +AE L+ + IHP I G+ A++ A E L ++ + G +++ + L+ TTL+SK++ K ++AV+AVL + + NL+ I V K+GG L D+ L G +DK Sbjct: 34 AIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAAREAL--LSSAVDHGSDEVKFWQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRL----KGSGNLEAIHVIKKLGGSLADSYLDEGFLLDK 222
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPB_MACFA (T-complex protein 1 subunit beta OS=Macaca fascicularis GN=CCT2 PE=2 SV=3) HSP 1 Score: 131.724 bits (330), Expect = 4.460e-30 Identity = 78/195 (40.00%), Postives = 122/195 (62.56%), Query Frame = 1 Query: 214 AVARILRTSLGPKGMDKMLQSP--DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL---EPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDK 783 A+ +++++LGPKGMDK+L S D + +TNDGATIL+ + VDN AK++V++SR QD E+GDGTT V V+A LL +AE L+ + IHP I G+ A++ A E L ++ + G +++ + L+ TTL+SK++ K ++AV+AVL + + NL+ I + K+GG L D+ L G +DK Sbjct: 34 AIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAAREAL--LSSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRL----KGSGNLEAIHIIKKLGGSLADSYLDEGFLLDK 222
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPB_HUMAN (T-complex protein 1 subunit beta OS=Homo sapiens GN=CCT2 PE=1 SV=4) HSP 1 Score: 131.724 bits (330), Expect = 4.460e-30 Identity = 78/195 (40.00%), Postives = 122/195 (62.56%), Query Frame = 1 Query: 214 AVARILRTSLGPKGMDKMLQSP--DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL---EPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDK 783 A+ +++++LGPKGMDK+L S D + +TNDGATIL+ + VDN AK++V++SR QD E+GDGTT V V+A LL +AE L+ + IHP I G+ A++ A E L ++ + G +++ + L+ TTL+SK++ K ++AV+AVL + + NL+ I + K+GG L D+ L G +DK Sbjct: 34 AIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAAREAL--LSSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRL----KGSGNLEAIHIIKKLGGSLADSYLDEGFLLDK 222
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPH_TETPY (T-complex protein 1 subunit eta OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.825e-30 Identity = 74/204 (36.27%), Postives = 129/204 (63.24%), Query Frame = 1 Query: 193 ANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLER----IAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNL---DLIKVEGKVGGRLEDTELIYGITVDK 783 +N++A +++ I++T+LGP+GMDK+++ G TI+NDGATIL +D+ + AK +V+++++QD E+GDGTT V ++AG LL++++ +E G+HP + +GY+ A ++A+ L+ +A K + E L++ T+LNSK++ K +E+ V+AV E D NL DLI ++ GG + D+ L+ G+ K Sbjct: 24 SNINAVQSIVEIVKTTLGPRGMDKLIEGNRG-ATISNDGATILNLLDIVHPAAKTLVDIAKAQDDEVGDGTTSVCLLAGELLKESKNFIEEGMHPQIVTKGYKEALKLALTFLQENSYSVADKSDG--EKREMLLKCAQTSLNSKLLAHYKEFFSEMVVQAV------ETLDTNLLDKDLIGIKMVTGGSVTDSVLVKGVAFKK 218
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPB_MOUSE (T-complex protein 1 subunit beta OS=Mus musculus GN=Cct2 PE=1 SV=4) HSP 1 Score: 130.954 bits (328), Expect = 7.608e-30 Identity = 79/195 (40.51%), Postives = 121/195 (62.05%), Query Frame = 1 Query: 214 AVARILRTSLGPKGMDKMLQSP--DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL---EPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDK 783 A+ +++++LGPKGMDK+L S D + +TNDGATIL+ + VDN AK++V++SR QD E+GDGTT V V+A LL +AE L+ + IHP I G+ A++ A E L ++ + G ++ + L+ TTL+SK++ K ++AV+AVL + + NL+ I V K+GG L D+ L G +DK Sbjct: 34 AIGDLVKSTLGPKGMDKILLSSGRDAALMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIISGWREATKAAREAL--LSSAVDHGSDEARFWQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRL----KGSGNLEAIHVIKKLGGSLADSYLDEGFLLDK 222
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPB_DICDI (T-complex protein 1 subunit beta OS=Dictyostelium discoideum GN=cct2 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.298e-29 Identity = 80/213 (37.56%), Postives = 125/213 (58.69%), Query Frame = 1 Query: 154 EEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDG--DVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFG-LNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDK 783 + S RG A+ ++ A+ +++T+LGPKGMDK+L S ++ ITNDGATIL ++ +DN AK++V++SR+QD E+GDGTT V V+AG LL + E+L+++ +HP I G+ +A A L+ Q + E L+ TTL+SK+++ K A + V AVL + + NLD I + K GG L ++ L G ++K Sbjct: 13 QNASEERGEIARLSSFVGAIAITDLVKTTLGPKGMDKILISASNPNELIITNDGATILTKIYIDNPAAKILVDISRTQDDEVGDGTTSVCVLAGELLREGERLVQQKVHPQTIISGWRLALETARAALQSSTQDHSSDKVKFREDLLNIARTTLSSKILHTEKDHFANMVVDAVLRL----NGNTNLDNIHIIKKSGGSLRESYLDEGFILEK 221
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPA_DICDI (T-complex protein 1 subunit alpha OS=Dictyostelium discoideum GN=tcp1 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.298e-29 Identity = 73/195 (37.44%), Postives = 122/195 (62.56%), Query Frame = 1 Query: 166 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHL-ERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERK-DVN-----LDLIKVEGK 729 R+ G + + NV A A+A I++TS GP G+DKML G + +TNDGATIL+++D+++ AK++V+LS QD E+GDGTT VV++A LL++A +L+ R +HP I G+ +A A++++ E +A K E D +V T+++SK +N ++I ++A+ V ++ K DV ++++K GK Sbjct: 12 RISGNEVRAQNVLAVTAIANIVKTSFGPIGLDKMLIDNIGSIVVTNDGATILQKIDIEHPAAKILVQLSELQDQEVGDGTTTVVILAAELLKRANELVARKVHPTVIISGFRLACTEAIKYINETLAVKVETLPKDF--IVNIAKTSMSSKTINDDSDFFSKIVIEAITRVKTIDYKGDVKYPINAINILKAHGK 204 The following BLAST results are available for this feature:
BLAST of CX671364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 460
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671364 ID=CX671364; Name=CX671364; organism=Citrus sinensis; type=EST; length=790bpback to top |