EY650228

Overview
NameEY650228
Unique NameEY650228
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length627
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650228 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.545e-21
Identity = 48/110 (43.64%), Postives = 65/110 (59.09%), Query Frame = 1
Query:   64 KLVCALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFSPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 393
            KL    L+  ++      AITCGQV+++L PC  + +  G      CCSGV+ L G AR+T D+QA C CLK   G     +   AAG+PS+CGV +PY IS S DCS++
Sbjct:    8 KLALVALVAAMLLVAADAAITCGQVSSALGPCAAYAKGSGTSPSAGCCSGVKRLAGLARSTADKQATCRCLKSVAGAYNAGR---AAGIPSRCGVSVPYTISASVDCSKI 114          
BLAST of EY650228 vs. ExPASy Swiss-Prot
Match: NLTP5_ARATH (Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana GN=LTP5 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.777e-20
Identity = 59/121 (48.76%), Postives = 76/121 (62.81%), Query Frame = 1
Query:   52 MDGV-KLVCALLLCILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFSPPPCCSGVRSLNGAARTTPDRQAACNCLK---RAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 396
            M+G+ KL   +++C+LVTAP+ +  AI+CG VT SL  C  +L  GG F P  CCSGV+ LN  ARTT DRQ AC C++   RA G+   +    AA LP  C VRI Y IS  T+C+ VR
Sbjct:    1 MEGLLKLSTLVIVCMLVTAPMASEAAISCGAVTGSLGQCYNYLTRGG-FIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALGS--RLNAGRAARLPGACRVRISYPISARTNCNTVR 118          
BLAST of EY650228 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.080e-20
Identity = 50/122 (40.98%), Postives = 74/122 (60.66%), Query Frame = 1
Query:   52 MDGVKLVCALLLCILVTAPV------TNAITCGQVTASLAPCIPFLRTGGRFSPPP--CCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 393
            M G +   AL+  + V A        + A++CG VT+S+APC+ ++   GR S P   CCSGVR+LNG A ++ DR+ AC+CLK    + R +    AA +PS+CGV + + IS S DCS++
Sbjct:    1 MAGARRTMALVALVAVVAAAVVAERASAAVSCGDVTSSIAPCLSYVM--GRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120          
BLAST of EY650228 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.080e-20
Identity = 50/122 (40.98%), Postives = 74/122 (60.66%), Query Frame = 1
Query:   52 MDGVKLVCALLLCILVTAPV------TNAITCGQVTASLAPCIPFLRTGGRFSPPP--CCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 393
            M G +   AL+  + V A        + A++CG VT+S+APC+ ++   GR S P   CCSGVR+LNG A ++ DR+ AC+CLK    + R +    AA +PS+CGV + + IS S DCS++
Sbjct:    1 MAGARRTMALVALVAVVAAAVVAERASAAVSCGDVTSSIAPCLSYVM--GRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120          
BLAST of EY650228 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.055e-19
Identity = 48/112 (42.86%), Postives = 68/112 (60.71%), Query Frame = 1
Query:   61 VKLVCALLLCILVTAP-VTNAITCGQVTASLAPCIPFLRTGGRFSPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 393
            V L+ A L+ +L  AP    A+ CGQV + + PC+ +++ GG      CC+GVR L+  A+++ DRQ  CNCLK     I  +  N AA +PS+C V +PY ISP  DCSR+
Sbjct:    6 VLLMAAALVLMLTAAPRAAVALNCGQVDSKMKPCLTYVQ-GGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116          
BLAST of EY650228 vs. ExPASy Swiss-Prot
Match: NLTP_AMACA (Non-specific lipid-transfer protein OS=Amaranthus caudatus PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.351e-19
Identity = 45/94 (47.87%), Postives = 62/94 (65.96%), Query Frame = 1
Query:  118 AITCGQVTASLAPCIPFLRTGGRFSPPP-CCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 396
            A+TC  VT +L PC+ +L+  G   PP  CC+GVRSL  AA+T  DR+ ACNC+K A    + +   VAA L SQCGVR+ Y +SP+ +C+ V+
Sbjct:    1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94          
BLAST of EY650228 vs. ExPASy Swiss-Prot
Match: NLTP1_AMAHP (Non-specific lipid-transfer protein 1 OS=Amaranthus hypochondriacus PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.351e-19
Identity = 45/94 (47.87%), Postives = 62/94 (65.96%), Query Frame = 1
Query:  118 AITCGQVTASLAPCIPFLRTGGRFSPPP-CCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 396
            A+TC  VT +L PC+ +L+  G   PP  CC+GVRSL  AA+T  DR+ ACNC+K A    + +   VAA L SQCGVR+ Y +SP+ +C+ V+
Sbjct:    1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94          
BLAST of EY650228 vs. ExPASy Swiss-Prot
Match: NLTP7_ARATH (Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.070e-19
Identity = 48/115 (41.74%), Postives = 73/115 (63.48%), Query Frame = 1
Query:   61 VKLVCALLLCILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFSP-PPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTI-RGIKPNVAAGLPSQCGVRIPY--KISPSTDCS 387
            +KL C + + ++   P+T   A++CG+V ++L PC  +L  GG  SP P CC+GVR LNG   TT DR+ AC C+K A   +  G+  + AAG+P +CG++IPY  +I  +T C+
Sbjct:    5 MKLGCLVFVFVIAAGPITAKAALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCN 119          
BLAST of EY650228 vs. ExPASy Swiss-Prot
Match: NLTP1_HELAN (Non-specific lipid-transfer protein AP10 OS=Helianthus annuus PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 5.237e-19
Identity = 43/112 (38.39%), Postives = 71/112 (63.39%), Query Frame = 1
Query:   58 GVKLVCALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFSPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 393
            GV ++  +++  L+  P   AITC  VT +L PC+P+LR+GG+   P CC+G + L GA RT  DR+ AC C K A   ++ ++P++A+ LP +CG+     I+P+ +C+ +
Sbjct:    7 GVAILAMIVMAQLMVHPSV-AITCNDVTGNLTPCLPYLRSGGK-PTPACCAGAKKLLGATRTQADRRTACKCAKTAAPQLK-VRPDMASSLPGKCGISTSIPINPNVNCNTI 115          
BLAST of EY650228 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.563e-18
Identity = 47/110 (42.73%), Postives = 63/110 (57.27%), Query Frame = 1
Query:   64 KLVCALLLCILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFSPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 393
            K++  ++  +L  A    AI C QV   LA C+P+L+ GG  SP  CC+G+ SL  AA    DRQ ACNCLK    TI GI  + A  LP++CGV I    S + DC+ +
Sbjct:   10 KMLLLVITILLGIAYHGEAIACPQVNMYLAQCLPYLKAGGNPSPM-CCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNSI 118          
The following BLAST results are available for this feature:
BLAST of EY650228 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
NLTP8_HORVU9.545e-2143.64Non-specific lipid-transfer protein Cw18 OS=Hordeu... [more]
NLTP5_ARATH2.777e-2048.76Non-specific lipid-transfer protein 5 OS=Arabidops... [more]
NLTP3_ORYSJ8.080e-2040.98Non-specific lipid-transfer protein 3 OS=Oryza sat... [more]
NLTP3_ORYSI8.080e-2040.98Non-specific lipid-transfer protein 3 OS=Oryza sat... [more]
NLTP1_HORVU1.055e-1942.86Non-specific lipid-transfer protein 1 OS=Hordeum v... [more]
NLTP_AMACA2.351e-1947.87Non-specific lipid-transfer protein OS=Amaranthus ... [more]
NLTP1_AMAHP2.351e-1947.87Non-specific lipid-transfer protein 1 OS=Amaranthu... [more]
NLTP7_ARATH3.070e-1941.74Non-specific lipid-transfer protein 7 OS=Arabidops... [more]
NLTP1_HELAN5.237e-1938.39Non-specific lipid-transfer protein AP10 OS=Helian... [more]
NLTPB_ARATH7.563e-1842.73Non-specific lipid-transfer protein 11 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-F12-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650228 ID=EY650228; Name=EY650228; organism=Citrus sinensis; type=EST; length=627bp
ATCAGGGCGGCACCCACGCGTGCCGAGCATAAATCGGCCTGAAGAATTCT
CATGGATGGCGTTAAGCTTGTTTGTGCTTTGCTTTTGTGCATTCTGGTGA
CTGCCCCGGTGACTAATGCCATAACATGCGGGCAGGTGACAGCCTCCTTG
GCTCCATGCATCCCTTTCTTGAGAACTGGAGGGCGTTTTTCTCCACCGCC
ATGCTGTAGCGGCGTCAGGTCTCTCAACGGCGCCGCCAGAACCACCCCTG
ACCGCCAAGCTGCATGCAACTGCTTGAAACGAGCTTACGGAACAATCCGC
GGCATCAAACCTAATGTTGCCGCTGGCCTTCCTAGTCAATGTGGAGTCAG
AATTCCTTACAAGATCAGCCCCAGCACCGACTGCTCTAGGGTCAGGTGAA
GTTGAGTTTGAGCTCTGTGACTTTCCAAGTATGATTGACTGAGAAGAATA
AATAAATAAAGAATATCTATGTTAATCTCTTTGTCCGAACGAGTCTCCAC
TTGTATGAGTTTCACTCTCATGTCATGTTTGTATATTTGCTTCTTATGTC
ATATTAAATATGTAAACCCGATCTGTGCTTTGAGTGATTAATTATAGCTA
TTTTGTGGTACTAAAAAAAAAAAAAAA
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