CX671292
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671292 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.492e-12 Identity = 53/176 (30.11%), Postives = 72/176 (40.91%), Query Frame = 3 Query: 141 NQEGLYLERVKXXXXXXXXXXXXWGRNPRDDSPCSWRGVECDPRSHSVASIDLSNANIAGPFPSLLCRLEXXXXXXXXXXSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYN 668 N E L VK W N D PC+W V C V S+++++ ++G L I +L L L N LTG + L L L+ LDL+GN FSG+IP S G L + L NLL G +P + +S L L+LS+N Sbjct: 37 NYEVAALMSVKNKMKDEKEVLSGWDINSVD--PCTWNMVGCSSEGF-VVSLEMASKGLSG------------------------ILSTSIGELTHLHTLLLQNNQLTGPIPSELGQLSELETLDLSGNRFSGEIPASLGFLTHLNYLRLSRNLLSGQVPHLVAGLSGLSFLDLSFN 185
BLAST of CX671292 vs. ExPASy Swiss-Prot
Match: Y4374_ARATH (Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.492e-12 Identity = 54/179 (30.17%), Postives = 83/179 (46.37%), Query Frame = 3 Query: 246 WRGVECDPRSHSVASIDLSNANIAGPFPSLLCRLEXXXXXXXXXXSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLT-ECNLVGEIPDSLGR 779 W GV C+ + ++ L + G P P+ IS L+ L L NL++G +L +L FL L NN SG +P F ++ L ++L N +GTIP+ L + ++ LNL+ N L G I P+L L++L+ + L+ +L G IPD L R Sbjct: 58 WTGVTCNQDGSRIIAVRLPGVGLNGQIP-----------------------PNTISRLSALRVLSLRSNLISGEFPKDFVELKDLAFLYLQDNNLSGPLPLDFSVWKNLTSVNLSNNGFNGTIPSSLSRLKRIQSLNLANNT-LSGDI-PDLSVLSSLQHIDLSNNYDLAGPIPDWLRR 211
BLAST of CX671292 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 7.492e-12 Identity = 48/175 (27.43%), Postives = 80/175 (45.71%), Query Frame = 3 Query: 282 VASIDLSNANIAGPFPSLLCRLEXXXXXXXXXXSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVGEIPDSLGRLAKLVDLDL 806 + +I + ++ GP P L L + +LP I +Q + N L+G + + L +L+ L ++ NNFSG IP+ GR KL+ + + + L G IP N+ L+ ++ + + +IP +G+ T L L + L G IP S L L +L L Sbjct: 101 ITNIKVYAIDVVGPIPPELWTLTYLTNLNLGQNVLTGSLPPAIGNLTRMQWMTFGINALSGPVPKEIGLLTDLRLLGISSNNFSGSIPDEIGRCTKLQQMYIDSSGLSGRIPLSFANLVQLEQAWIA-DLEVTDQIPDFIGDWTKLTTLRIIGTGLSGPIPSSFSNLTSLTELRL 274
BLAST of CX671292 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.847e-11 Identity = 55/190 (28.95%), Postives = 84/190 (44.21%), Query Frame = 3 Query: 237 PC--SWRGVECDPRSHSVASIDLSNANIAGPFPS-LLCRLEXXXXXXXXXXSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVGEIPDSLGRLAKLVD 797 PC +WRGV C V I LS ++G +L +L ++ LP NLQ L+L+ N TG + +L+ + LK+L+L N F G I F + L + +N ++PA ++++LK L L N F G + G LE L + + G IP SL + + D Sbjct: 58 PCGQNWRGVTCS--GSRVTQIKLSGLELSGTLGGYMLDKLTSLTELDLSSNNLGGDLPYQFPP--NLQRLNLANNQFTGAASYSLSQITPLKYLNLGHNQFKGQIAIDFSKLDSLTTLDFSFNSFTNSLPATFSSLTSLKSLYLQNNQF-SGTVDVLAG--LPLETLNIANNDFTGWIPSSLKGITLIKD 240
BLAST of CX671292 vs. ExPASy Swiss-Prot
Match: PGIP1_ORYSJ (Polygalacturonase inhibitor 1 OS=Oryza sativa subsp. japonica GN=FOR1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.718e-11 Identity = 58/196 (29.59%), Postives = 86/196 (43.88%), Query Frame = 3 Query: 312 IAGPFPSLLCRLEXXXXXXXXXXSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESF--GRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNP--------FLPGR--------------------IPPELGNLTNLEILWLTECNLVGEIPDSLGRLAKLVDLDLA 809 ++GP P+ L L +++ +PD ++ ++L +DLS N LTG + + +DLPNL+ LDL N +G IP G+F+ L L YN L G IP + ++LS+N F GR PPEL L L+ + G +P SL L+ L LDL+ Sbjct: 108 LSGPIPACLTALSNLQFLTISHTNVSGVIPDSLARIRSLDSVDLSHNSLTGPIPNSFSDLPNLRSLDLRSNKLTGCIPAGLVQGQFRSL---ILSYNQLTGPIPRDDAQ-DEINTVDLSHNRLTGDASFLFAAGRPIGKVDLSWNDLDFDLSKLVFPPELTYLD------LSHNRIRGTVPRSLAALSTLQTLDLS 293
BLAST of CX671292 vs. ExPASy Swiss-Prot
Match: MRH1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MRH1 OS=Arabidopsis thaliana GN=MRH1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.718e-11 Identity = 41/83 (49.40%), Postives = 52/83 (62.65%), Query Frame = 3 Query: 426 LQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPF 674 +Q LDLS L GTL P L+ L +L+ L L+ N+FSG IP+ +G F+ LEV+ L N L G IP L N +LK L LS N F Sbjct: 72 VQILDLSGYSLEGTLAPELSQLSDLRSLILSRNHFSGGIPKEYGSFENLEVLDLRENDLSGQIPPELSNGLSLKHLLLSGNKF 154
BLAST of CX671292 vs. ExPASy Swiss-Prot
Match: LRRC1_MOUSE (Leucine-rich repeat-containing protein 1 OS=Mus musculus GN=Lrrc1 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.718e-11 Identity = 53/138 (38.41%), Postives = 79/138 (57.25%), Query Frame = 3 Query: 393 TLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVGEIPDSLGRLAKLVDLDL 806 +LP++I NL L+L +NLLT L +L L L+ LDL GNN ++PES G L+ + L N L +P +GN+ L L++S N R+P E+ LT+L L +++ NL+ IP+ +G+L KL L L Sbjct: 142 SLPENIGNLYNLASLELRENLLT-YLPDSLTQLRRLEELDL-GNNEIYNLPESIGALLHLKDLWLDGNQL-SELPQEIGNLKNLLCLDVSENRL--ERLPEEISGLTSLTYLVISQ-NLLETIPEGIGKLKKLSILKL 273
BLAST of CX671292 vs. ExPASy Swiss-Prot
Match: LRRC1_HUMAN (Leucine-rich repeat-containing protein 1 OS=Homo sapiens GN=LRRC1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.718e-11 Identity = 52/133 (39.10%), Postives = 77/133 (57.89%), Query Frame = 3 Query: 393 TLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPELGNLTNLEILWLTECNLVGEIPDSLGRLAKL 791 +LP++I NL L+L +NLLT L +L L L+ LDL GNN ++PES G L+ + L N L +P +GN+ L L++S N R+P E+ LT+L L +++ NL+ IPD +G+L KL Sbjct: 142 SLPENIGNLYNLASLELRENLLT-YLPDSLTQLRRLEELDL-GNNEIYNLPESIGALLHLKDLWLDGNQL-SELPQEIGNLKNLLCLDVSENRL--ERLPEEISGLTSLTDLVISQ-NLLETIPDGIGKLKKL 268
BLAST of CX671292 vs. ExPASy Swiss-Prot
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.856e-11 Identity = 49/160 (30.63%), Postives = 73/160 (45.62%), Query Frame = 3 Query: 225 RDDSPCSWRGVECDPRSHSVASIDLSNANIAGPFPS-LLCRLEXXXXXXXXXXSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALADLPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPEL 701 + SPC+W GV CD V ++ L ++G P + L + +LP D+ +C +L+ L L N +G + L L NL L+L N FSG+I F +L+ + L N L G++ L +L N+S N L G IP L Sbjct: 55 KQTSPCNWTGVLCD--GGRVTALRLPGETLSGHIPEGIFGNLTQLRTLSLRLNGLTGSLPLDLGSCSDLRRLYLQGNRFSGEIPEVLFSLSNLVRLNLAENEFSGEISSGFKNLTRLKTLYLENNKLSGSL---LDLDLSLDQFNVS-NNLLNGSIPKSL 208
BLAST of CX671292 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.342e-11 Identity = 50/163 (30.67%), Postives = 75/163 (46.01%), Query Frame = 3 Query: 219 NPRDDSPCSWRGVEC-DPRSHSVASIDLSNANIAGPFPSLLCRLEXXXXXXXXXXSINSTLPDDISACQNLQHLDLSQNLLTGTLTPALAD-LPNLKFLDLTGNNFSGDIPESFGRFQKLEVISLVYNLLDGTIPAFLGNISTLKMLNLSYNPFLPGRIPPEL 701 N S C GV C + + + + S+ L + +AG +P+ + C++LQ LDLS N L+G++ + LP L LDL+GN G IP + L + L N L G+IP+ L + L+ L+L+ N L G IP EL Sbjct: 52 NSSASSICKLTGVSCWNEKENRIISLQLQSMQLAGE------------------------IPESLKLCRSLQSLDLSGNDLSGSIPSQICSWLPYLVTLDLSGNKLGGSIPTQIVECKFLNALILSDNKLSGSIPSQLSRLDRLRRLSLAGND-LSGTIPSEL 189 The following BLAST results are available for this feature:
BLAST of CX671292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671292 ID=CX671292; Name=CX671292; organism=Citrus sinensis; type=EST; length=812bpback to top |