CX671281
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671281 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.688e-21 Identity = 65/194 (33.51%), Postives = 93/194 (47.94%), Query Frame = -3 Query: 163 SEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLE----DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 732 +E P LTGE P D G+DP L+ PD +++ + E+ H R AML G I+PE K WF+ G +DG L + + + EY+R G + + D+ +PG FDPL L D + E+KNGRLA+ A+ G Q TGE P+ NL+ HL++P N+ T Sbjct: 194 AEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELLGK--------GAWFEAGD-SVDGLKLGFI--------------TMAIAAPTEYWRGQGGFNWQKGELDRSYPG--FDPLNLTTD-----YTRAAEVKNGRLALTAVAGLTAQYLATGESPLANLSAHLANPIGANITT 357 HSP 2 Score: 90.8929 bits (224), Expect = 1.039e-17 Identity = 64/178 (35.96%), Postives = 87/178 (48.88%), Query Frame = -3 Query: 205 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYR-----ITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENL 723 P YLTGE GD G+DP GL+ P F + Q E+ H R +ML G ++PE WF+ + D N FAV+A + +V EY+R + N + D+ +PG FDPL L + K EIKNGRLAM M G +Q++VTG+ P+ NL Sbjct: 381 PRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELLG--------NGAWFQ----IWDKVDFNR----------FAVVA-LQVVAPLEYWRGNGGFLWNDEETVDQSYPG--FDPLNLTTE-----YTKEAEIKNGRLAMNGMFGLEVQSHVTGKSPINNL 528
BLAST of CX671281 vs. ExPASy Swiss-Prot
Match: FCP_ISOGA (Fucoxanthin-chlorophyll a-c binding protein, chloroplastic OS=Isochrysis galbana GN=FCP PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.228e-11 Identity = 56/171 (32.75%), Postives = 76/171 (44.44%), Query Frame = -3 Query: 223 YDPFGLSKKPDDFSKYQAYEL--IHARWAMLGAAGFIIPEAFNK-FGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLD------------LEDKLHPGG-PFDPLGLA-KDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGE 684 +DP G K D Y+ E H R AML + GF++ E F+ F + GP + IP + I + +G AE +RI G L + PG FDPLGLA DPD+F L++ KE+ +GRLAM A GF Q V+G+ Sbjct: 46 FDPAGFLKGKDKLEVYRLREAETTHGRVAMLASLGFVVQEKFHPLFSGDNGPAI-------------------EQIPQLPYWLWIVMTIGIGRAELFRIQKGWAKVNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQEAVSGD 197 The following BLAST results are available for this feature:
BLAST of CX671281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671281 ID=CX671281; Name=CX671281; organism=Citrus sinensis; type=EST; length=881bpback to top |