CX671280

Overview
NameCX671280
Unique NameCX671280
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12923 contig Csv1_Contig12923:19..831. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671280 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.819e-67
Identity = 119/219 (54.34%), Postives = 151/219 (68.95%), Query Frame = 1
Query:  157 GKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFC 813
            G I++RE+F+ +L +RN++ CPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HET GG      G +  GYCF+ ++    D  D       +YYGRGPIQL+   NY R            NNPDL+ATDP++SF++AIWFWMTAQ  KPSCH VII +W PS  D  A R+PGYG+ TNIINGG+EC  G N AV +RIGF+  +C
Sbjct:   28 GSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQI----DQSD-------RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYC 231          
BLAST of CX671280 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2)

HSP 1 Score: 254.988 bits (650), Expect = 3.682e-67
Identity = 123/227 (54.19%), Postives = 151/227 (66.52%), Query Frame = 1
Query:  154 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNET-MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS--DYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFC 813
            +  I+SR +FD +L +RND  CPA  FYTYDAF+ AA AFPGF  +G +    KRE+AAF AQT HETTGGW  AP G YAWGYCF  E    +  DYC  +  +PC    KYYGRGPIQLS+N+NY               +PDL+A+D  +SF +A WFWMT Q PKPSCH V   +W PSA+D  AGR+PGYG+ TNIINGG+ECG G +  V +RIGF+  +C
Sbjct:   81 VASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNY--GPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLECGHGEDDRVADRIGFYKRYC 305          
BLAST of CX671280 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.827e-66
Identity = 116/219 (52.97%), Postives = 146/219 (66.67%), Query Frame = 1
Query:  157 GKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFC 813
            G I++RE+F+ +L +RN++ CPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HET GG      G +  GYCF+ ++               +YYGRGPIQL+   NY R            NNPDL+ATDP++SFK+AIWFWMT Q  KPSCH VII +W PS  D  A R+PGYG+ TNIING  ECG G N A  +RIGF+  +C
Sbjct:   28 GSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD-----------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYC 231          
BLAST of CX671280 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.639e-65
Identity = 117/221 (52.94%), Postives = 154/221 (69.68%), Query Frame = 1
Query:  154 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQG-GNAAVRNRIGFFTTFC 813
            +G II+R MF+ +L +R D+ C    FYTYDAFI+AA  FP FG +GN+  R+RE+AAFF QT HETTGGW  AP G +AWGYC ++E++P     DP       YYGRGPIQL+  YNY              NNPDL+++DPV++F++AIWFWMTAQ PKPSCH+VI ++W PS +D  +GRLPGYG+ TNIINGG ECG+G      ++R+G++  +C
Sbjct:   27 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPS----DP------PYYGRGPIQLTHKYNYQLAGDALGLDLV--NNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYC 234          
BLAST of CX671280 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.234e-64
Identity = 120/221 (54.30%), Postives = 152/221 (68.78%), Query Frame = 1
Query:  151 ELGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFC 813
            ++G I++ ++F+++L+ RND+RCPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HETTGG   A G  +A GYCF+ E +               +YGRGPIQL+   NY              NNPDL+ATD  +SFK+AIWFWMTAQ  KPSCH+VI  +W PSA D  A R PGYG+ TNIINGGIECG+G N  V +RIGF+  +C
Sbjct:   18 DVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSADG-PFAGGYCFVREGNQMGS----------GFYGRGPIQLTGQSNY--DLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYC 225          
BLAST of CX671280 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 6.083e-62
Identity = 118/220 (53.64%), Postives = 150/220 (68.18%), Query Frame = 1
Query:  154 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFC 813
            +G I++ ++F+++L+ RND RCPA GFYTYDAFI AA +FPGFG +G++T R++EIAAFF QT HETTGG   A    +  GYCF+ +    +D  D       +YYGRGPIQL+   NY +            NNPDL+ATD  +SFK+AIWFWMT Q  KPS H+VII  W PSA D  A R+PGYG+ TNIINGGIECG G N AV +RIG++  +C
Sbjct:   27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ----NDQSD-------RYYGRGPIQLTNRNNYEKAGTAIGQELV--NNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYC 231          
BLAST of CX671280 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 6.083e-62
Identity = 119/220 (54.09%), Postives = 149/220 (67.73%), Query Frame = 1
Query:  154 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFC 813
            +G I++ ++F+++L+ RND RCPA GFYTYDAFI AA +FPGFG SG++T R++EIAAFF QT HETTGG   A    +  GYCF+ +    +D  D       +YYGRGPIQL+   NY +            NNPDL+ATD  +SFK+AIWFWMT Q  KPS H+VII  W PSA D  A R PG G+ TNIINGGIECG G NAAV +RIG++  +C
Sbjct:   27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ----NDQSD-------RYYGRGPIQLTNQNNYEKAGNAIRQDLV--NNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYC 231          
BLAST of CX671280 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 7.945e-62
Identity = 117/221 (52.94%), Postives = 138/221 (62.44%), Query Frame = 1
Query:  154 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGG-NAAVRNRIGFFTTFC 813
            L  II   MFDD+L+YRND +CPA GFYTY+AFI AA+ FP FGN+G++ MRKREIAAF  QT HET G WP A G +Y WGYC +                              NYNY  C             P+L+ TDP ++FK+A+WFWMT Q PKPSCH VI + W PSA D  AGR+PGYG+ TNIINGGIECGQGG N A  NRIGF+ T+C
Sbjct:   85 LSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHM------------------------------NYNYGLCGDDLNLPLL--QEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYC 273          
BLAST of CX671280 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.355e-61
Identity = 119/216 (55.09%), Postives = 146/216 (67.59%), Query Frame = 1
Query:  154 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFF 801
            +G I++ ++FD +L+ RND RC A  FYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HETTGG   +P G YA GYCF+ E +   +           YYGRGPIQL+   NY              NNPDL+ATD  +SFK+AIWFWMT Q  KPSCH+VI   W PSA D  A R+PGYG+ TNIINGGIECG+G NA V +RIG++
Sbjct:   26 VGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGTL-SPDGPYAGGYCFLREGNQMGN----------GYYGRGPIQLTGQSNY--DLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYY 228          
BLAST of CX671280 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.770e-61
Identity = 107/226 (47.35%), Postives = 147/226 (65.04%), Query Frame = 1
Query:  154 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCD------PNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFC 813
            +  I+S +++  L  +++D  CPARGFYTY +F+ AA  FP F  +G    RKRE+AAF AQ  HETTGGW  AP G YAWG C+  E++P S YCD      P YP +  Y+GRGPIQ+SWN+NY               NP+++A    ++F++A+WFWMT +  KPSCH+V++ E++P   DV A R  G+GL TNI+NGG+EC + G+A V NRIGF+  +C
Sbjct:   49 VSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGK-SYHGRGPIQISWNFNY--GPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVNGGLECNRAGDARVNNRIGFYRRYC 271          
The following BLAST results are available for this feature:
BLAST of CX671280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHIA_SOLCI2.819e-6754.34Acidic endochitinase pcht28 OS=Solanum chilense PE... [more]
CHI12_ORYSJ3.682e-6754.19Chitinase 12 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIA_SOLLC1.827e-6652.97Acidic 26 kDa endochitinase OS=Solanum lycopersicu... [more]
CHI11_ORYSJ2.639e-6552.94Chitinase 11 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIB_SOLLC2.234e-6454.30Acidic 27 kDa endochitinase OS=Solanum lycopersicu... [more]
CHIQ_TOBAC6.083e-6253.64Acidic endochitinase Q OS=Nicotiana tabacum PE=1 S... [more]
CHIP_TOBAC6.083e-6254.09Acidic endochitinase P OS=Nicotiana tabacum PE=1 S... [more]
CHIB_POPTR7.945e-6252.94Acidic endochitinase WIN6.2B OS=Populus trichocarp... [more]
CHIT_PETHY1.355e-6155.09Acidic endochitinase OS=Petunia hybrida PE=2 SV=1[more]
CHI10_ORYSJ1.770e-6147.35Chitinase 10 OS=Oryza sativa subsp. japonica GN=Ch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_10B02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-10B02-C4-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671280 ID=CX671280; Name=CX671280; organism=Citrus sinensis; type=EST; length=813bp
ATCATAACTGTTGCTTTCAAAATGAGGCTTATTGGGTCCTTACTAATTTT
CTCTCTAGTTTTATCTTTTGTACTAGGAGGCTCAGCACAGAACTGTGGAA
GCGACGTTGTGTACGGTGGACGTGATACCGGCCATGGGACGCATGGCGGT
GAACTGGGCAAGATCATCTCAAGGGAGATGTTTGATGACTTGCTTGAGTA
TAGAAATGATGAACGATGCCCTGCCAGAGGCTTCTACACTTATGATGCTT
TTATAGAGGCAGCCCAAGCTTTTCCAGGCTTTGGTAACTCTGGAAATGAA
ACCATGCGTAAAAGAGAAATCGCTGCCTTTTTTGCCCAAACTGGCCATGA
AACTACTGGGGGATGGCCCGATGCACCTGGTGGCGAATATGCTTGGGGAT
ATTGCTTTATAAGCGAAGTTAGCCCTCCGTCCGACTACTGTGATCCTAAC
TATCCATGTCGAGGGAAGTACTATGGCCGAGGTCCAATTCAACTCTCTTG
GAATTACAATTACTTACGGTGCGGAGAAGGCCTAGGGCTAGGAGAGGAGT
TGTTGAACAATCCAGACCTTCTTGCTACTGATCCAGTACTATCATTCAAG
TCAGCAATCTGGTTCTGGATGACTGCACAGCCACCAAAGCCATCGTGCCA
CGAAGTCATTATCGACGAATGGAAACCATCAGCAAATGACGTANACGCCG
GCCGGCTTCCGGGATACGGTCTAACCACAAATATAATCAACGGTGGAATT
GAATGTGGCCAAGGTGGGAATGCCGCTGTACGTAACCGTATTGGGTTCTT
TACCACTTTCTGT
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