CX671280
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671280 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.198e-29 Identity = 76/219 (34.70%), Postives = 105/219 (47.95%), Query Frame = 1 Query: 175 EMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCDPN---YPCR--GKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFC 813 E F + ++ + C + FYT +F+ AA ++ GF KREIAAFFA HET C+I+E++ S DYCD N +PC+ KYYGRGP+Q+SWNYNY +PD +A DP +SFK+A+WFWM N+V L G+G T ING +EC AV R+ ++ +C Sbjct: 93 EAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNY--GPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWM---------------------NNVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYYKDYC 275
BLAST of CX671280 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.580e-28 Identity = 83/225 (36.89%), Postives = 104/225 (46.22%), Query Frame = 1 Query: 163 IISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPP--SDYCDPN----YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFC 813 I+S+ FD ++ + CP + FYT AF+ A P FGN G+ KREIAAFFA HETT C I E YCD + YPC KYYGRGP+QLSWNYNY NP+ +ATD SFK+A+WFWMT + H V+ G+G TT ING +EC +RI F+ +C Sbjct: 90 IVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTN-------------LCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNY--ALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT------NVHSVMNQ---------------GFGATTKAINGALECNGQNQDQANDRIQFYKKYC 275
BLAST of CX671280 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 4.400e-28 Identity = 78/226 (34.51%), Postives = 115/226 (50.88%), Query Frame = 1 Query: 154 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCDPN---YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFC 813 +G I+++ F+ ++ C + FYT D+FI AA FP F NS + +REIA FA HET +C+I E++ S DYCD N YPC GK Y+GRGPIQLSWNYNY C P+L++++P ++F++ +WFWM + P ++++ G+G T IN G+EC G + AV RI ++ +C Sbjct: 72 VGSIVTQAFFNGIINQAGGG-CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHET-------------GHFCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGAC--GQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP-------VLNQ--------------GFGATIRAIN-GMECNGGNSGAVNARIRYYRDYC 255
BLAST of CX671280 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 9.803e-28 Identity = 73/219 (33.33%), Postives = 106/219 (48.40%), Query Frame = 1 Query: 175 EMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCDPN---YPCR--GKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFC 813 E F + ++ + C + FYT +F+ AA+++ GF N KREIAAFFA HET C+I+E++ + DYCD + +PC+ KYYGRGP+Q+SWN+NY +PD +A DP +SFK+A+WFWM N+V G+G T ING +EC AV R+ ++ +C Sbjct: 90 EAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNY--GPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM---------------------NNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYC 272
BLAST of CX671280 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.414e-26 Identity = 73/224 (32.59%), Postives = 108/224 (48.21%), Query Frame = 1 Query: 163 IISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCD----PNYPCRGK--YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVXAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFC 813 I++ + + +++ + D C + FYT DAF+ A ++ FG G+E KREIAA FA HET +C+I E+ S DYCD YPC Y+GRGPIQLSWN+NY P+ ++ D V+SFK+A+W+WM Q +P ++ G+G T ING +EC V+ R+ ++T +C Sbjct: 71 ILTADFLNGIID-QADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHET-------------GHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNY--GPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM--QHVRPVINQ-------------------GFGATIRAINGALECDGANPTTVQARVNYYTEYC 257
BLAST of CX671280 vs. ExPASy Swiss-Prot
Match: CHI4_ARAHY (Endochitinase 4 (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.680e-11 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 1 Query: 619 MTAQPPKPSCHEVIIDEWKPSANDVXAGRLPGYGLTTNIINGGIEC 756 MT Q KPSCH+VI + W+P+A D AGR PGYG+ TNIINGG++C Sbjct: 1 MTPQGNKPSCHDVITNAWRPTATDSAAGRAPGYGVITNIINGGLDC 46 The following BLAST results are available for this feature:
BLAST of CX671280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671280 ID=CX671280; Name=CX671280; organism=Citrus sinensis; type=EST; length=813bpback to top |