CX671272

Overview
NameCX671272
Unique NameCX671272
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2043 contig Csv1_Contig2043:28..831. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX671272 vs. ExPASy Swiss-Prot
Match: CBPS_YEAST (Carboxypeptidase S OS=Saccharomyces cerevisiae GN=CPS1 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.625e-12
Identity = 45/135 (33.33%), Postives = 69/135 (51.11%), Query Frame = 2 
Query:  365 ILLKWPGSNPQLPSILLNSHTDVVPSEP---SKWSHHPFGAHLDSQGN-IFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGA--------EKFADSHVFNSLNVGIVLDEGLASTTED 733
            +L  W GS+P L  +LL +H DVVP      S W   PF  H D + + ++ RGS D K + +   EAI +L   GF+P R++ +S   DEE  G  GA        E++ D  +++ ++ G    EG+    +D
Sbjct:  149 LLYTWEGSDPDLKPLLLMAHQDVVPVNNETLSSWKFPPFSGHYDPETDFVWGRGSNDCKNLLIAEFEAIEQLLIDGFKPNRTIVMSLGFDEEASGTLGAASLASFLHERYGDDGIYSIIDEG----EGIMEVDKD 279
[Close]
BLAST of CX671272 vs. ExPASy Swiss-Prot
Match: P20D1_CHICK (Probable carboxypeptidase PM20D1 OS=Gallus gallus GN=PM20D1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.123e-11
Identity = 39/112 (34.82%), Postives = 59/112 (52.68%), Query Frame = 2 
Query:  383 GSNPQLPSILLNSHTDVVPSEPSKWSHHPFGAHLDSQGNIFARGSQDMKCVGMQYLEAIRRLKASGFQPVRSVYLSFVPDEEIGGHDGAEKFADSHVFNSLNVGIVLDEGLA 718
            GS+ ++   +L +H DVVP+ P  W   PF A  + +G I+ RG+ D K   +  L+A+  L    ++P RS Y+    DEE+ G  GA K A       + +  +LDEG A
Sbjct:  124 GSDSEMMPYMLLAHMDVVPAPPEGWDFPPFSA-AEHEGFIYGRGTLDNKNSAIGILQALEFLLRRNYRPRRSFYVGIGHDEEVFGQKGALKIAALLESRGVKLSFLLDEGSA 234
The following BLAST results are available for this feature:
BLAST of CX671272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
CBPS_YEAST5.625e-1233.33Carboxypeptidase S OS=Saccharomyces cerevisiae GN=... [more]
P20D1_CHICK8.123e-1134.82Probable carboxypeptidase PM20D1 OS=Gallus gallus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_10A08_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-10A08-A16-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671272 ID=CX671272; Name=CX671272; organism=Citrus sinensis; type=EST; length=804bp
CAAGATTCCATTTGGTAAACAAGTGCAGCCCTGGGCGCTTTAACTGTGTT
GAGGAGGACCAACCGTTAATCGGCTAATCGCTGTCCTGAAGTTGTCACTC
ACACACACTCACTGTCTCCTTGGAAACAAAATGAGGAATCGGCATCGTCT
TCTTCATATCTGCTTCGTATTCTATCAACTGATCATCTTCTCAAGCCCAG
CAAAATCAGATGATTCTATAATAGAAAGATTCCGAGCATACCTCCAAATC
GACACATCTCAACCAAACCCAGACTACACAAATGCCTCCAAGTTTATCCT
GGCTCAGGCCGAAGCCCTCTCCCTCGAATCCCAAACCCTCGAATTCGCCA
AAAACAAGCCCCTCATTCTTCTCAAGTGGCCCGGCTCAAACCCTCAACTA
CCCTCCATCCTCCTCAACTCCCACACCGACGTCGTTCCATCTGAACCCAG
CAAATGGTCCCACCATCCCTTCGGTGCCCACCTCGATTCTCAGGGGAATA
TCTTCGCTAGAGGGTCCCAGGACATGAAGTGCGTGGGCATGCAGTACTTG
GAGGCCATACGAAGATTGAAGGCAAGTGGGTTTCAGCCTGTTCGGTCTGT
TTACTTGTCTTTTGTCCCTGATGAGGAGATTGGTGGCCATGATGGCGCTG
AGAAGTTTGCTGATTCTCATGTCTTTAACAGCTTGAACGTTGGTATTGTT
CTCGATGAAGGGCTGGCATCGACCACTGAGGATTACAGAGCGTTTTATGC
GGAGAGATGTCCTTGGTGGCTGGTTATTAAGGCTAGAGGGGCTCCTGGAC
ATGG
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