CX671262
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671262 vs. ExPASy Swiss-Prot
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.628e-12 Identity = 46/140 (32.86%), Postives = 77/140 (55.00%), Query Frame = -2 Query: 149 RSLSQVLNFMDQMTESPFF-------SGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIR------XXXXXXXXXXESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP*VKEEERADVFQVKVD 529 R++ Q+++ MD++ E SGT G +R WD + ++ + + DMPGL KEDV+VS+E + LVI+ + Y +R+ LP+ + + D+IKAE+KNGVL +++P K E V V+++ Sbjct: 100 RTMRQMIDTMDRLFEDTMTFPGRNRASGT-GEIRTPWDIHDDENEIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEEDGRDKHSWGRNYSSYDTRLSLPDNVVK-DKIKAELKNGVLFISIP--KTEVEKKVIDVQIN 235
BLAST of CX671262 vs. ExPASy Swiss-Prot
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.918e-11 Identity = 43/134 (32.09%), Postives = 73/134 (54.48%), Query Frame = -2 Query: 155 RSLSQVLNFMDQMTESPFFSGTR----GGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXESVRR-----YTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP*VKEEERADVFQVK 529 RS+ Q+L+ MD++ E R G +R W+ K+ + + + DMPG+ KEDV+VS+E + LVI+ + R Y +R+ LP+ + +++KAE+K+GVL +T+P K E Q++ Sbjct: 100 RSMRQMLDTMDRIFEDAITIPGRNIGGGEIRVPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHREENGGEDCWSRKSYSCYDTRLKLPDNCEK-EKVKAELKDGVLYITIPKTKIERTVIDVQIQ 232 The following BLAST results are available for this feature:
BLAST of CX671262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671262 ID=CX671262; Name=CX671262; organism=Citrus sinensis; type=EST; length=842bpback to top |