DY305706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305706 vs. ExPASy Swiss-Prot
Match: SR54C_ARATH (Signal recognition particle 54 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=FFC PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.842e-23 Identity = 55/121 (45.45%), Postives = 74/121 (61.16%), Query Frame = 2 Query: 143 VLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 505 + Q +K K+ D+V+ DT+GRL + +M+EL K V K +N P E+LLV+D TG FN +GITG ILTKLDG +RGG +SV + G P+K VG GE +EDL+PF Sbjct: 246 IAKQGLKEAKKNNVDVVIMDTAGRLQIDKGMMDEL----KDVKKFLN--PTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPF 360 HSP 2 Score: 28.8758 bits (63), Expect = 4.842e-23 Identity = 13/30 (43.33%), Postives = 18/30 (60.00%), Query Frame = 1 Query: 10 LMAAGDTFRAAASDQLEIWAERTGCEIVVA 99 ++ AGD +R AA DQL I E+ G + A Sbjct: 208 MLIAGDVYRPAAIDQLVILGEQVGVPVYTA 237
BLAST of DY305706 vs. ExPASy Swiss-Prot
Match: SRP54_THEAC (Signal recognition 54 kDa protein OS=Thermoplasma acidophilum GN=srp54 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.571e-22 Identity = 51/127 (40.16%), Postives = 84/127 (66.14%), Query Frame = 2 Query: 158 VKRGKEQGFDIV--LCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAI 532 +K G EQ D+ + DTSGR + L +E+ K+AV AP+E+L+++D T G P+A+ FND +G+TG+I+TK+DG+A+GG +S V E+ +P+ F+G GE ++DL+ FD + F++ + Sbjct: 168 IKHGLEQLKDVAVKIIDTSGRDSMDAELFDEIRRIKEAV------APDEVLMIIDATMGQQAGPEAKAFNDAIGVTGIIITKMDGTAKGGGALSAVAEIHVPIYFIGTGEHMDDLEVFDPKKFLSRL 288
BLAST of DY305706 vs. ExPASy Swiss-Prot
Match: SRP54_THEON (Signal recognition 54 kDa protein OS=Thermococcus onnurineus (strain NA1) GN=srp54 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.582e-22 Identity = 52/127 (40.94%), Postives = 80/127 (62.99%), Query Frame = 2 Query: 152 QAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAI 532 + V+ +E+G DI++ D++GR SL+EE+ A+ P+E++LV+DGT G QA F + I +I+TKLDGSA+GG +S V G P+KF+GVGE ++DL+PFD + FV+ + Sbjct: 173 EGVEHFREKGVDIIIVDSAGRHKEEKSLIEEMKQISAAI------KPHEVILVIDGTIGQQAYNQALAFKEATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGERIDDLEPFDPKRFVSRL 293
BLAST of DY305706 vs. ExPASy Swiss-Prot
Match: SRP54_THEGJ (Signal recognition 54 kDa protein OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=srp54 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.121e-21 Identity = 51/127 (40.16%), Postives = 80/127 (62.99%), Query Frame = 2 Query: 152 QAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAI 532 + V+ K++G D+++ DT+GR L+EE+ +A+ P+E++LV+DGT G QA F + I +I+TKLDGSA+GG +S V G P+KF+GVGE ++DL+PFD + FV+ + Sbjct: 173 EGVEYFKDKGVDVIIVDTAGRHKEESGLIEEMKQISEAI------KPHEVILVIDGTIGQQAYHQALAFKEATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPKRFVSRL 293
BLAST of DY305706 vs. ExPASy Swiss-Prot
Match: SRP54_SYNY3 (Signal recognition particle protein OS=Synechocystis sp. (strain PCC 6803) GN=ffh PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.464e-21 Identity = 58/132 (43.94%), Postives = 76/132 (57.58%), Query Frame = 2 Query: 143 VLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIFS 538 + Q V++ KE G D VL DT+GRL + +M EL K+ V P++ LLV+D TG F++ +GITG ILTKLDG RGG +SV G P+KFVGVGE VE LQPF + + I + Sbjct: 170 IARQGVEKAKELGVDTVLIDTAGRLQIDPQMMAELAEIKQVV------KPDDTLLVVDAMTGQEAANLTHTFHEQIGITGAILTKLDGDTRGGAALSVRQISGQPIKFVGVGEKVEALQPFYPDRLASRILN 295
BLAST of DY305706 vs. ExPASy Swiss-Prot
Match: DOCK_SULAC (Probable signal recognition particle protein OS=Sulfolobus acidocaldarius GN=dpa PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.494e-21 Identity = 54/132 (40.91%), Postives = 78/132 (59.09%), Query Frame = 2 Query: 143 VLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIFS 538 V A+ K + D+VL DT+GR+H + L+EEL K V ++ P+ +L+LD G + L QAR F + VG +ILTK+D A+GG +S+ EL PV ++GVG+ +DL PF + FV IFS Sbjct: 243 VAFDAISFAKSRNIDVVLIDTAGRMHIDSDLVEEL----KRVLRIAK--PDFRILILDSLAGSDALEQARHFENNVGYDAVILTKVDADAKGGIALSLAYELKKPVVYMGVGQNYDDLIPFSPDWFVERIFS 368 HSP 2 Score: 30.0314 bits (66), Expect = 1.494e-21 Identity = 13/29 (44.83%), Postives = 20/29 (68.97%), Query Frame = 1 Query: 7 TLMAAGDTFRAAASDQLEIWAERTGCEIV 93 T++AA DTFRAAA +QL A + +++ Sbjct: 204 TIIAASDTFRAAAQEQLAYHASKLEVQLI 232
BLAST of DY305706 vs. ExPASy Swiss-Prot
Match: SRP54_PYRKO (Signal recognition 54 kDa protein OS=Pyrococcus kodakaraensis GN=srp54 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.563e-21 Identity = 49/127 (38.58%), Postives = 79/127 (62.20%), Query Frame = 2 Query: 152 QAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAI 532 + V+ +E+G D+++ D++GR L+EE+ +A+ P+E++LV+DGT G QA F + I +I+TKLDGSA+GG +S V G P+KF+G GE ++DL+PFD + FV+ + Sbjct: 173 EGVEHFREKGVDVIIVDSAGRHKEEKGLIEEMRQISEAI------KPHEVILVIDGTIGQQAYNQAMAFKEATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGERIDDLEPFDPKRFVSRL 293
BLAST of DY305706 vs. ExPASy Swiss-Prot
Match: SRP54_MYCMY (Signal recognition particle protein OS=Mycoplasma mycoides GN=ffh PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.265e-21 Identity = 52/118 (44.07%), Postives = 75/118 (63.56%), Query Frame = 2 Query: 152 QAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPF 505 QA++ KE FD+V+ DT+GRL + LM+EL KK +PNEILLV+DG +G ++ EFND + ++G+++TKLDG ARGG +S+ +P+KF+G GEG L F Sbjct: 174 QALEYAKENNFDVVILDTAGRLQVDQVLMKELDNLKKKT------SPNEILLVVDGMSGQEIINVTNEFNDKLKLSGVVVTKLDGDARGGATLSISYLTKLPIKFIGEGEGYNALAAF 285
BLAST of DY305706 vs. ExPASy Swiss-Prot
Match: SRP54_METJA (Signal recognition 54 kDa protein OS=Methanocaldococcus jannaschii GN=srp54 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.265e-21 Identity = 55/128 (42.97%), Postives = 84/128 (65.62%), Query Frame = 2 Query: 158 VKRGKEQ--GFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITG-LILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAI 532 VK G E+ D+++ DT+GR L+EE+ K + ++ N P+EI+LV+DGT G QA+ F + VG G +I+TKLDGSA+GG +S V E P+KF+G+GEG++DL+PFD + F++ + Sbjct: 172 VKEGMEKFKKADVLIIDTAGRHKEEKGLLEEM----KQIKEITN--PDEIILVIDGTIGQQAGIQAKAFKEAVGEIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGIGEGIDDLEPFDPKKFISRL 293
BLAST of DY305706 vs. ExPASy Swiss-Prot
Match: SRP54_PYRFU (Signal recognition 54 kDa protein OS=Pyrococcus furiosus GN=srp54 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.489e-21 Identity = 50/121 (41.32%), Postives = 78/121 (64.46%), Query Frame = 2 Query: 170 KEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAI 532 K +G DI++ DT+GR + +L+EE+ K + V++ P+E++LV+DGT G QA F + I +I+TKLDGSA+GG +S V G P+KF+G GE ++D++PFD FV+ + Sbjct: 179 KSKGVDIIIVDTAGRHKEDKALIEEM----KQISNVIH--PHEVILVIDGTIGQQAYNQALAFKEATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPRFVSRL 293 The following BLAST results are available for this feature:
BLAST of DY305706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 132
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305706 ID=DY305706; Name=DY305706; organism=Citrus sinensis; type=EST; length=724bpback to top |