CV713042

Overview
NameCV713042
Unique NameCV713042
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV713042 vs. ExPASy Swiss-Prot
Match: KPYK_STAHJ (Pyruvate kinase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=pyk PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.983e-16
Identity = 59/201 (29.35%), Postives = 105/201 (52.24%), Query Frame = 3
Query:  159 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV---KGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLS 752
            TKIV T+GP S S +++   +KAGM+VAR +FS G+ E H+  ++ ++       K   ++LDT GPE++  +  +  I L+  G  V+      E T +   + ++ L   V+ G  I +   L        V L+V ++   KG +V C I NT  L      ++   +++ LP ++DKD + I  +G++  +D+++ S
Sbjct:    4 TKIVCTIGPASESEEMLEKLMKAGMNVARLNFSHGSHEEHKARIDTIRKVADRLGKTIGILLDTKGPEIRTHDMKDGLIMLE-KGKEVIVSMSQVEGTPEKFSVTYEDLINDVQVGSYILLDDGL--------VELQVKDIDKTKG-EVKCDILNTGELKNKK-GVNLPGVKVNLPGITDKDADDI-LFGIKEDVDYIAAS 192          
BLAST of CV713042 vs. ExPASy Swiss-Prot
Match: KPYM_FELCA (Pyruvate kinase isozyme M1 OS=Felis catus GN=PKM2 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.590e-16
Identity = 60/209 (28.71%), Postives = 111/209 (53.11%), Query Frame = 3
Query:  159 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLS 752
            T I+ T+GP SRSV+++   +K+GM+VAR +FS G  EYH ET++N++AA ++        +  AV LDT GPE++   +       + LK   ++ +T D    ++    VL +++  + K V+ G  +++   L +        L V E   + +   ++N  +L GS   ++     ++LP +S+KD + +  +GV+  +D +  S
Sbjct:   45 TGIICTIGPASRSVEILKEMIKSGMNVARLNFSHGTHEYHAETIKNVRAATESFASDPIRYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENVLWLDYKNICKVVEVGSKVYVDDGLIS--------LLVKEKGADFLVTEVENGGSL-GSKKGVNLPGAAVDLPAVSEKDIQDL-KFGVEQDVDMVFAS 243          
BLAST of CV713042 vs. ExPASy Swiss-Prot
Match: KPYK_LACDE (Pyruvate kinase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=pyk PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 3.383e-16
Identity = 52/198 (26.26%), Postives = 99/198 (50.00%), Query Frame = 3
Query:  159 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLS 752
            TKIV TLGP S  ++ I+   +AG +V RF+FS GN E H   +  ++   K T KL  + LDT G E++  ++     ++     + ++ D  +     ++ + + GL      G T+ I            + ++  + +  ++ C  +NT  + GS   ++A  + I LP +++KD + I  +G+++ I+F+  S
Sbjct:    4 TKIVSTLGPASDDIETITKLAEAGANVFRFNFSHGNHEEHLARMNMVREVEKKTGKLLGIALDTKGAEIRTTDQEGGKFTINTGDEIRVSMDATKAGNKDMIHVTYPGLFDDTHVGGTVLI------DDGAVGLTIKAKDEEKRELVCEAQNTGVI-GSKKGVNAPGVEIRLPGITEKDTDDI-RFGLKHGINFIFAS 193          
BLAST of CV713042 vs. ExPASy Swiss-Prot
Match: KPYK_ASPNG (Pyruvate kinase OS=Aspergillus niger GN=pkiA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.383e-16
Identity = 69/230 (30.00%), Postives = 122/230 (53.04%), Query Frame = 3
Query:   78 SSHLLLEEPIRMASILEPSKASFFPAMTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT-TKKLCAVMLDTVGPELQVVN-KSEKAISLKADGSVVLTPDCGQEATS---QVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLS 752
            S+ + LE   ++ + + PSK       T I+GT+GPK+ SV+ I+    AG++V R +FS G+ +YHQ  ++N + A KT   +  A+ LDT GPE++  N   +K I +K    + +T D  Q AT+   + + +++  + K +  G  I++   + +        LEV + K   V C+  N   ++ S   ++     ++LP LS+KD   +  +GV+NK+D +  S
Sbjct:   11 SNRMKLEWHSKLNTEMVPSKNF---RRTSIIGTIGPKTNSVEKINSLRTAGLNVVRMNFSHGSYQYHQSVIDNAREAAKTQVGRPLAIALDTKGPEIRTGNTPDDKDIPIKQGHELNITTD-EQYATASDDKNMYLDYKNITKVISPGKLIYVDDGILSFEV-----LEVVDDKTIRVRCL--NNGNIS-SRKGVNLPGTDVDLPALSEKDIADL-KFGVRNKVDMVFAS 227          
BLAST of CV713042 vs. ExPASy Swiss-Prot
Match: KPYK1_TRYBB (Pyruvate kinase 1 OS=Trypanosoma brucei brucei GN=PYK1 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.383e-16
Identity = 59/199 (29.65%), Postives = 101/199 (50.75%), Query Frame = 3
Query:  162 KIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQE--ATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLS 752
            +IV T+GP ++SV+ +   +K+GMSVAR +FS G+ EYHQ T+ N++AA         + LDT GPE++     +  +S      V +T D   E   T +   I++  L  +V+ G +I++      G  T  V   VS+     + C + N   L      ++     ++LP +S+KD++ +  +GV   +D +  S
Sbjct:   23 RIVCTIGPSTQSVEALKNLMKSGMSVARMNFSHGSHEYHQTTINNVRAAAAELGLHIGIALDTKGPEIRTGLFKDGEVSFAPGDIVCVTTDPAYEKVGTKEKFYIDYPQLTNAVRPGGSIYVDD----GVMTLRV---VSKEDDRTLKCHVNNHHRLTDRR-GINLPGCEVDLPAVSEKDRKDL-EFGVAQGVDMIFAS 212          
BLAST of CV713042 vs. ExPASy Swiss-Prot
Match: KPYM_MOUSE (Pyruvate kinase isozymes M1/M2 OS=Mus musculus GN=Pkm2 PE=1 SV=4)

HSP 1 Score: 85.1149 bits (209), Expect = 4.418e-16
Identity = 59/209 (28.23%), Postives = 111/209 (53.11%), Query Frame = 3
Query:  159 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLS 752
            T I+ T+GP SRSV+++   +K+GM+VAR +FS G  EYH ET++N++ A ++        +  AV LDT GPE++   +       + LK   ++ +T D    ++    +L +++  + K V+ G  I++   L +        L+V E   + +   ++N  +L GS   ++     ++LP +S+KD + +  +GV+  +D +  S
Sbjct:   45 TGIICTIGPASRSVEMLKEMIKSGMNVARLNFSHGTHEYHAETIKNVREATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLIS--------LQVKEKGADFLVTEVENGGSL-GSKKGVNLPGAAVDLPAVSEKDIQDL-KFGVEQDVDMVFAS 243          
BLAST of CV713042 vs. ExPASy Swiss-Prot
Match: KPYK_CHICK (Pyruvate kinase muscle isozyme OS=Gallus gallus GN=PKM2 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.418e-16
Identity = 61/209 (29.19%), Postives = 105/209 (50.24%), Query Frame = 3
Query:  159 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLS 752
            T I+ T+GP SRSVD +   +K+GM+VAR +FS G  EYH+ T++N++ A ++      T +  A+ LDT GPE++   +       + LK   ++ +T D    +     VL +++  L K +  G  I++   L +        L V E KG D          + GS   ++     ++LP +S+KD + +  +GV+  +D +  S
Sbjct:   44 TGIICTIGPASRSVDKLKEMIKSGMNVARLNFSHGTHEYHEGTIKNVREATESFASDPITYRPVAIALDTKGPEIRTGLIKGSGTAEVELKKGAALKVTLDNAFMENCDENVLWVDYKNLIKVIDVGSKIYVDDGLIS--------LLVKE-KGKDFVMTEVENGGMLGSKKGVNLPGAAVDLPAVSEKDIQDL-KFGVEQNVDMVFAS 242          
BLAST of CV713042 vs. ExPASy Swiss-Prot
Match: KPYM_HUMAN (Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=PKM2 PE=1 SV=4)

HSP 1 Score: 83.9593 bits (206), Expect = 9.842e-16
Identity = 58/209 (27.75%), Postives = 110/209 (52.63%), Query Frame = 3
Query:  159 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLS 752
            T I+ T+GP SRSV+ +   +K+GM+VAR +FS G  EYH ET++N++ A ++        +  AV LDT GPE++   +       + LK   ++ +T D    ++    +L +++  + K V+ G  I++   L +        L+V +   + +   ++N  +L GS   ++     ++LP +S+KD + +  +GV+  +D +  S
Sbjct:   45 TGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLIS--------LQVKQKGADFLVTEVENGGSL-GSKKGVNLPGAAVDLPAVSEKDIQDL-KFGVEQDVDMVFAS 243          
BLAST of CV713042 vs. ExPASy Swiss-Prot
Match: KPYM_PONAB (Pyruvate kinase isozyme M1 OS=Pongo abelii GN=PKM2 PE=2 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 1.285e-15
Identity = 58/209 (27.75%), Postives = 110/209 (52.63%), Query Frame = 3
Query:  159 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLS 752
            T I+ T+GP SRSV+ +   +K+GM+VAR +FS G  EYH ET++N++ A ++        +  AV LDT GPE++   +       + LK   ++ +T D    ++    +L +++  + K V+ G  I++   L +        L+V +   + +   ++N  +L GS   ++     ++LP +S+KD + +  +GV+  +D +  S
Sbjct:   45 TGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLIS--------LQVKQKGADFLLTEVENGGSL-GSKKGVNLPGAAVDLPAVSEKDIQDL-KFGVEQDVDMVFAS 243          
BLAST of CV713042 vs. ExPASy Swiss-Prot
Match: KPYK2_TRYBB (Pyruvate kinase 2 OS=Trypanosoma brucei brucei GN=PYK2 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.285e-15
Identity = 58/199 (29.15%), Postives = 101/199 (50.75%), Query Frame = 3
Query:  162 KIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQE--ATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIELPTLSDKDKEVISSWGVQNKIDFLSLS 752
            +IV T+GP ++SV+ +   +K+GMSVAR +FS G+ EYHQ T+ N++AA         + LDT GPE++     +  ++      V +T D   E   T +   I++  L K+V  G +I++      G  T  V   +S+     + C + N   L      ++     ++LP +S+KD++ +  +GV   +D +  S
Sbjct:   23 RIVCTIGPSTQSVEALKNLMKSGMSVARMNFSHGSHEYHQTTINNVRAAAAELGLHIGIALDTKGPEIRTGLFKDGEVTFAPGDIVCVTTDPAYEKVGTKEKFYIDYPQLTKAVPVGGSIYVDD----GVMTLRV---LSKEDDRTLKCHVNNHHRLTDRR-GINLPGCEVDLPAVSEKDRKDL-EFGVAQGVDMIFAS 212          
The following BLAST results are available for this feature:
BLAST of CV713042 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
KPYK_STAHJ1.983e-1629.35Pyruvate kinase OS=Staphylococcus haemolyticus (st... [more]
KPYM_FELCA2.590e-1628.71Pyruvate kinase isozyme M1 OS=Felis catus GN=PKM2 ... [more]
KPYK_LACDE3.383e-1626.26Pyruvate kinase OS=Lactobacillus delbrueckii subsp... [more]
KPYK_ASPNG3.383e-1630.00Pyruvate kinase OS=Aspergillus niger GN=pkiA PE=3 ... [more]
KPYK1_TRYBB3.383e-1629.65Pyruvate kinase 1 OS=Trypanosoma brucei brucei GN=... [more]
KPYM_MOUSE4.418e-1628.23Pyruvate kinase isozymes M1/M2 OS=Mus musculus GN=... [more]
KPYK_CHICK4.418e-1629.19Pyruvate kinase muscle isozyme OS=Gallus gallus GN... [more]
KPYM_HUMAN9.842e-1627.75Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=... [more]
KPYM_PONAB1.285e-1527.75Pyruvate kinase isozyme M1 OS=Pongo abelii GN=PKM2... [more]
KPYK2_TRYBB1.285e-1529.15Pyruvate kinase 2 OS=Trypanosoma brucei brucei GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002D21_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002D21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV713042 ID=CV713042; Name=CV713042; organism=Citrus sinensis; type=EST; length=753bp
TCGGCACGGGCTGCCTCTTTCATCTCTCGTACTCTCTCTGTATCTCTCTG
TATCTCTCTGTTCAGTGAAAGATGCATTCAAGTCACTTGCTTCTCGAGGA
GCCAATCAGGATGGCTTCAATCCTGGAGCCATCCAAAGCCAGTTTCTTCC
CGGCAATGACCAAAATTGTCGGAACGCTTGGTCCTAAATCTCGATCTGTT
GATGTTATATCCGGTTGCCTCAAAGCTGGAATGTCTGTGGCTAGATTCGA
TTTCTCGTGGGGTAATACTGAATACCACCAAGAGACCTTGGAGAATCTCA
AGGCGGCAGTTAAGACTACTAAGAAGCTTTGTGCTGTTATGTTGGACACA
GTGGGTCCCGAATTGCAGGTTGTTAATAAGAGTGAGAAGGCAATTTCACT
TAAGGCAGATGGTTCTGTTGTTCTCACACCTGACTGTGGACAAGAAGCCA
CTTCTCAAGTTTTGCCCATCAATTTCGATGGACTTGCTAAGTCAGTGAAG
AAAGGAGACACCATTTTTATCGGTCAATACTTGTTCACTGGAAGTGAGAC
TACTTCTGTGTGGCTGGAGGTTTCTGAAGTGAAAGGAAATGATGTAACTT
GTGTGATAAAGAATACTGCAACGTTGGCTGGTTCACTTTTCACTTTACAT
GCCTCTCAAATTCGTATTGAACTGCCAACTCTTTCTGATAAAGATAAGGA
GGTCATTAGTTCTTGGGGAGTTCAAAACAAAATTGACTTCCTCTCATTGT
CCT
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