CV713041

Overview
NameCV713041
Unique NameCV713041
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV713041 vs. ExPASy Swiss-Prot
Match: KPYR_MOUSE (Pyruvate kinase isozymes R/L OS=Mus musculus GN=Pklr PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.374e-18
Identity = 50/123 (40.65%), Postives = 72/123 (58.54%), Query Frame = -1
Query:  478 VDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSV 846
            ++SM    RPTRAE +DVANAVLDG+D I+L  ET +G +PVE + +   I  EAE        F++  +         E  A  AV A+ K  A+ II  T +GR+A+L+++YRP   V++V
Sbjct:  374 LESMITKARPTRAETSDVANAVLDGADCIMLSGETAKGSFPVEAVKMQHAIAREAEAAVYHRQLFEELRRAAPLSRDPTEVTAIGAVEASFKCCAAAIIVLTKTGRSAQLLSRYRPRAAVIAV 496          
BLAST of CV713041 vs. ExPASy Swiss-Prot
Match: KPYK_BACST (Pyruvate kinase OS=Bacillus stearothermophilus GN=pyk PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 4.374e-18
Identity = 47/124 (37.90%), Postives = 76/124 (61.29%), Query Frame = -1
Query:  478 VDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVF-NQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSV 846
            +DSM  N RPTRAEA+DVANA+ DG+DA++L  ET  G YPVE +  + +I    E+   ++D+  ++T +      T  ++I  S    A+ +  + I+  T SG+  +++AKYRP  P+++V
Sbjct:  282 LDSMQRNPRPTRAEASDVANAIFDGTDAVMLSGETAAGQYPVEAVKTMHQIALRTEQALEHRDILSQRTKE---SQTTITDAIGQSVAHTALNLDVAAIVTPTVSGKTPQMVAKYRPKAPIIAV 402          
BLAST of CV713041 vs. ExPASy Swiss-Prot
Match: KPYR_RAT (Pyruvate kinase isozymes R/L OS=Rattus norvegicus GN=Pklr PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 7.461e-18
Identity = 50/123 (40.65%), Postives = 72/123 (58.54%), Query Frame = -1
Query:  478 VDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSV 846
            ++SM    RPTRAE +DVANAVLDG+D I+L  ET +G +PVE + +   I  EAE        F++  +         E  A  AV A+ K  A+ II  T +GR+A+L+++YRP   V++V
Sbjct:  374 LESMITKARPTRAETSDVANAVLDGADCIMLSGETAKGSFPVEAVMMQHAIAREAEAAVYHRQLFEELRRAAPLSRDPTEVTAIGAVEASFKCCAAAIIVLTKTGRSAQLLSQYRPRAAVIAV 496          
BLAST of CV713041 vs. ExPASy Swiss-Prot
Match: KPYK_CHLTR (Pyruvate kinase OS=Chlamydia trachomatis GN=pyk PE=3 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 2.171e-17
Identity = 46/124 (37.10%), Postives = 74/124 (59.68%), Query Frame = -1
Query:  478 VDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMT-HLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSV 846
            ++SM  N  PTRAE +DVANA+ DG+ A++L  ET  G +PV  +  +  I  E EK F+   +F+   K     ++ +LE+I  S ++ A K  A  II +T +G +   ++KYRP +P+++V
Sbjct:  280 LESMIRNPLPTRAEVSDVANAIYDGTSAVMLSGETALGAHPVHAVKTMRSIIQETEKTFDYHAFFQLNDKNSALKVSPYLEAIGFSGIQIAEKASAKAIIVYTQTGGSPMFLSKYRPYLPIIAV 403          
BLAST of CV713041 vs. ExPASy Swiss-Prot
Match: KPYK_CLOPE (Pyruvate kinase OS=Clostridium perfringens GN=pykF PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.703e-17
Identity = 42/123 (34.15%), Postives = 73/123 (59.35%), Query Frame = -1
Query:  478 VDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSV 846
            +DSM  N RPTRAEA+DV NA+ DG+DAI+L  E+  G +P+E    + +I  +AE   + +   ++       P    ++I+ SA + A K     I+  T +G  A++++KY+P+ P++++
Sbjct:  280 LDSMIRNPRPTRAEASDVCNAIFDGTDAIMLSGESASGSFPIEAAMTMSRIAKKAEANLDYNYLLRRLKDPNPNPDAFADAISYSASKTASKFPTKAIVAATQTGSTAKILSKYKPSCPIIAI 402          
BLAST of CV713041 vs. ExPASy Swiss-Prot
Match: KPYK_STAAW (Pyruvate kinase OS=Staphylococcus aureus (strain MW2) GN=pyk PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16
Identity = 51/149 (34.23%), Postives = 73/149 (48.99%), Query Frame = -1
Query:  406 VDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQ--LKWSFSGAFEQGNHS 846
            +DSM  N R TRAEA+DVANA+ DG+DA++L  ET  GLYP E +  +  I   AE   +         K V   +  + +I  S    A+ +    I+  T SG  AR I+KYRP   +++V        Q  + W      ++G  S
Sbjct:  280 LDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRTKLVETSL--VNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEETARQCSIVWGVQPVVKKGRKS 426          
BLAST of CV713041 vs. ExPASy Swiss-Prot
Match: KPYK_STAAS (Pyruvate kinase OS=Staphylococcus aureus (strain MSSA476) GN=pyk PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16
Identity = 51/149 (34.23%), Postives = 73/149 (48.99%), Query Frame = -1
Query:  406 VDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQ--LKWSFSGAFEQGNHS 846
            +DSM  N R TRAEA+DVANA+ DG+DA++L  ET  GLYP E +  +  I   AE   +         K V   +  + +I  S    A+ +    I+  T SG  AR I+KYRP   +++V        Q  + W      ++G  S
Sbjct:  280 LDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRTKLVETSL--VNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEETARQCSIVWGVQPVVKKGRKS 426          
BLAST of CV713041 vs. ExPASy Swiss-Prot
Match: KPYK_STAAR (Pyruvate kinase OS=Staphylococcus aureus (strain MRSA252) GN=pyk PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16
Identity = 51/149 (34.23%), Postives = 73/149 (48.99%), Query Frame = -1
Query:  406 VDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQ--LKWSFSGAFEQGNHS 846
            +DSM  N R TRAEA+DVANA+ DG+DA++L  ET  GLYP E +  +  I   AE   +         K V   +  + +I  S    A+ +    I+  T SG  AR I+KYRP   +++V        Q  + W      ++G  S
Sbjct:  280 LDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRTKLVETSL--VNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEETARQCSIVWGVQPVVKKGRKS 426          
BLAST of CV713041 vs. ExPASy Swiss-Prot
Match: KPYK_STAAN (Pyruvate kinase OS=Staphylococcus aureus (strain N315) GN=pyk PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16
Identity = 51/149 (34.23%), Postives = 73/149 (48.99%), Query Frame = -1
Query:  406 VDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQ--LKWSFSGAFEQGNHS 846
            +DSM  N R TRAEA+DVANA+ DG+DA++L  ET  GLYP E +  +  I   AE   +         K V   +  + +I  S    A+ +    I+  T SG  AR I+KYRP   +++V        Q  + W      ++G  S
Sbjct:  280 LDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRTKLVETSL--VNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEETARQCSIVWGVQPVVKKGRKS 426          
BLAST of CV713041 vs. ExPASy Swiss-Prot
Match: KPYK_STAAM (Pyruvate kinase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pyk PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16
Identity = 51/149 (34.23%), Postives = 73/149 (48.99%), Query Frame = -1
Query:  406 VDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISIVGKICAEAEKVFNQDLYFKKTVKCVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQ--LKWSFSGAFEQGNHS 846
            +DSM  N R TRAEA+DVANA+ DG+DA++L  ET  GLYP E +  +  I   AE   +         K V   +  + +I  S    A+ +    I+  T SG  AR I+KYRP   +++V        Q  + W      ++G  S
Sbjct:  280 LDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRTKLVETSL--VNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEETARQCSIVWGVQPVVKKGRKS 426          
The following BLAST results are available for this feature:
BLAST of CV713041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
KPYR_MOUSE4.374e-1840.65Pyruvate kinase isozymes R/L OS=Mus musculus GN=Pk... [more]
KPYK_BACST4.374e-1837.90Pyruvate kinase OS=Bacillus stearothermophilus GN=... [more]
KPYR_RAT7.461e-1840.65Pyruvate kinase isozymes R/L OS=Rattus norvegicus ... [more]
KPYK_CHLTR2.171e-1737.10Pyruvate kinase OS=Chlamydia trachomatis GN=pyk PE... [more]
KPYK_CLOPE3.703e-1734.15Pyruvate kinase OS=Clostridium perfringens GN=pykF... [more]
KPYK_STAAW1.838e-1634.23Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAS1.838e-1634.23Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAR1.838e-1634.23Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]
KPYK_STAAN1.838e-1634.23Pyruvate kinase OS=Staphylococcus aureus (strain N... [more]
KPYK_STAAM1.838e-1634.23Pyruvate kinase OS=Staphylococcus aureus (strain M... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_0002D21_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002D21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV713041 ID=CV713041; Name=CV713041; organism=Citrus sinensis; type=EST; length=846bp
CGTGTGAATTTCATACTCAAAAAAAACTAAAATATCTTTCCCCGACTTCC
AGTCTGGGAAGTTTCATAATTACTAGTGCGCTTTAAATACAATTTGGCCA
TAATAAAAACCTGGAGATATACCTCACAGGTGCCAGCAACATGGTCCACC
ACCGTTTTCAAAAAATTAGGACAAAATAATGCCACAAAACATGGGCAGTA
CAAGCATTTTAGTCTTCGAGCTCAATAATCTTAACCACAGATGCATCGCC
GACTTTCTGGCAAACAACAACTCGATCATGCGACTTTATAACTCCTGAAG
CCTTCCCGTGATCAAGAGCAACCTTTAGAACCGACTCATTCGTGGCATTT
GTAGACTCCGCAGGATGTCGAGGATCAGCAAGCATAGGGAAGAGACCTCT
CACAATGAGTGATTGCCTTGCTCAAAGGCTCCACTAAAGCTCCATTTTAG
TTGATTTGTCTTAAGGCGTGGGATCACAACTGATAGAACCGGCATTGTTG
GCCTGTACTTGGCAATCAATCTTGCAGCTCTTCCTGATGAAGTGAAGCAT
ATAATAACAGATGCCTTCACTTTAATGGCTGCCCTTACCGCTGAAGATGC
AATAGACTCTAAGTGGGTCATTGGCTCTCCAACGCATTTGACGGTCTTCT
TGAAATAAAGGTCCTGGTTGAAAACCTTCTCTGCCTCAGCACAAATTTTA
CCAACAATAGAAATAGTTTCTACGGGGTACAATCCACGCAGAGTCTCAGC
ACCAAGAAGAATCGCATCACTTCCATCTAACACAGCATTTGCAACATCAG
TTGCTTCAGCACGAGTTGGTCTCAGGTTGTCAGTCATACTGTCCAC
back to top