CV713027
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV713027 vs. ExPASy Swiss-Prot
Match: ODPA_RICTY (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia typhi GN=pdhA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.104e-14 Identity = 46/172 (26.74%), Postives = 89/172 (51.74%), Query Frame = -2 Query: 243 SEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVY 758 ++G + A N +++ PV++I NN +++ T +S KG ++G+R ++DG D +Y+ E P+++E TYR H+ SD + KYR +E+ ++ +D + R R+ I N + + + SV++ I A++ +E + P +L+TD+Y Sbjct: 156 NQGQVYEAFNMASLWGLPVVYIIENNEYSMGTSVSRSTFMRDLYKKGESFGIRGFQLDGMDFEEMYNGTKQVAEYVRENSFPVILEVKTYRYRGHSMSDPA-KYRSKEEVAKYK-ERDTLVRIRQIILDNKYATEEDLKAIERSVQEVIKVAVEFSENSPLPSEDELYTDIY 325
BLAST of CV713027 vs. ExPASy Swiss-Prot
Match: ODPAT_MOUSE (Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial OS=Mus musculus GN=Pdha2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.104e-14 Identity = 52/176 (29.55%), Postives = 83/176 (47.16%), Query Frame = -2 Query: 231 SEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSP 758 ++G A N SA+ + P +FIC NN + + T S KG + + +RV+G D L + A A + PI++E TYR H+ SD YR +E+ R+ DP+ R+ I SN N + E+ + V+K++ A Q A +P + D+ +Y P Sbjct: 201 NQGQVFEAYNMSALWKLPCVFICENNLYGMGTSNERSAASTDYHKKG--FIIPGLRVNGMDILCVREATKFAADHCRSGKGPIVMELQTYRYHGHSMSDPGISYRSREEVHNVRSKSDPIMLLRERIISNNLSNIEELKEIDADVKKEVEDAAQFATTDPEPAVEDIANYLYHQDP 374
BLAST of CV713027 vs. ExPASy Swiss-Prot
Match: ODPA_SMIMA (Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial (Fragment) OS=Sminthopsis macroura GN=PDHA PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.442e-14 Identity = 52/176 (29.55%), Postives = 81/176 (46.02%), Query Frame = -2 Query: 231 SEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSP 758 ++G A N +A+ + P IFIC NN + + T + S +G + I VDG D L + A A P+L+E TYR H+ SD YR +EI+ R+ DP+ + + +N + + E+ VRK+I A Q A +PP+ +L +Y P Sbjct: 173 NQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDF--IPGIMVDGMDVLCVREATKFAAAYCRSGKGPMLMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNNNLASIEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSRDP 346
BLAST of CV713027 vs. ExPASy Swiss-Prot
Match: ODPA_PIG (Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial (Fragment) OS=Sus scrofa GN=PDHA1 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.883e-14 Identity = 51/176 (28.98%), Postives = 82/176 (46.59%), Query Frame = -2 Query: 231 SEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSP 758 ++G A N +A+ + P +FIC NN + + T + S +G + +RVDG D L + A A PIL+E TYR H+ SD YR +EI+ R+ DP+ + + ++ + + E+ VRK+I A Q A +PP+ +L +Y P Sbjct: 199 NQGQIFEAYNMAALWKLPCVFICENNRYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYCNDP 372
BLAST of CV713027 vs. ExPASy Swiss-Prot
Match: ODPA_KLULA (Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial OS=Kluyveromyces lactis GN=PDA1 PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.883e-14 Identity = 49/174 (28.16%), Postives = 82/174 (47.13%), Query Frame = -2 Query: 243 SEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKP--PISDLFTDVY 758 ++G + N + + P +F C NN + + T + +G+ + ++V+G D LA+Y A A++ + PI++E TYR G H+ SD T YR DEI+ R+ DP+ + + G D + RK + ++ A+ A P +S LF DVY Sbjct: 212 NQGQVFESFNMAKLWNLPAVFCCENNKYGMGTAAARSSAMTEYFKRGQY--IPGLKVNGMDILAVYQASKFAKDWTVSGNGPIVLEYETYRYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKMHLLELGIATEDEIKAYDKAARKYVDEQVELADAAPAPEAKMSILFEDVY 383
BLAST of CV713027 vs. ExPASy Swiss-Prot
Match: ODPA_BOVIN (Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Bos taurus GN=PDHA1 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.883e-14 Identity = 52/176 (29.55%), Postives = 82/176 (46.59%), Query Frame = -2 Query: 231 SEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSP 758 ++G A N +A+ + P IFIC NN + + T + S +G + +RVDG D L + A A PIL+E TYR H+ SD YR +EI+ R+ DP+ + + ++ + + E+ VRK+I A Q A +PP+ +L +Y P Sbjct: 200 NQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYCNDP 373
BLAST of CV713027 vs. ExPASy Swiss-Prot
Match: ODPA_YEAST (Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial OS=Saccharomyces cerevisiae GN=PDA1 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.460e-14 Identity = 50/174 (28.74%), Postives = 82/174 (47.13%), Query Frame = -2 Query: 243 SEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKP--PISDLFTDVY 758 ++G + N + + PV+F C NN + + T S +G+ + ++V+G D LA+Y A A++ + P+++E TYR G H+ SD T YR DEI+ R+ DP+ + + G S RK + ++ A+ A P +S LF DVY Sbjct: 220 NQGQVFESFNMAKLWNLPVVFCCENNKYGMGTAASRSSAMTEYFKRGQY--IPGLKVNGMDILAVYQASKFAKDWCLSGKGPLVLEYETYRYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKMHLIDLGIATEAEVKAYDKSARKYVDEQVELADAAPPPEAKLSILFEDVY 391
BLAST of CV713027 vs. ExPASy Swiss-Prot
Match: ODPA_RICPR (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia prowazekii GN=pdhA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.460e-14 Identity = 45/172 (26.16%), Postives = 89/172 (51.74%), Query Frame = -2 Query: 243 SEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVY 758 ++G + A N +++ P+++I NN +++ T ++ KG ++G+R ++DG D +Y+ E P+++E TYR H+ SD + KYR +E+E ++ +D + R R+ I N + + SVR+ I A++ +E + P +L+T++Y Sbjct: 156 NQGQVYEAFNMASLWGLPIVYIIENNEYSMGTSVARSTFMCDLYKKGESFGIRGFQLDGMDFEEMYNGTKQVAEYVRENSFPVILEVKTYRYRGHSMSDPA-KYRSKEEVEKYK-ERDTLVRIREIILDNKYATEADLKAIEQSVREIIKVAVEFSENSPLPAEDELYTEIY 325
BLAST of CV713027 vs. ExPASy Swiss-Prot
Match: ODPA_PANTR (Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Pan troglodytes GN=PDHA1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.213e-14 Identity = 51/176 (28.98%), Postives = 81/176 (46.02%), Query Frame = -2 Query: 231 SEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSP 758 ++G A N +A+ + P IFIC NN + + T + S +G + +RVDG D L + A A PIL+E TYR H+ S YR +EI+ R+ DP+ + + ++ + + E+ VRK+I A Q A +PP+ +L +Y P Sbjct: 200 NQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDF--IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSGPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDP 373
BLAST of CV713027 vs. ExPASy Swiss-Prot
Match: ODPAT_HUMAN (Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial OS=Homo sapiens GN=PDHA2 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.763e-12 Identity = 49/177 (27.68%), Postives = 81/177 (45.76%), Query Frame = -2 Query: 228 SEGDFHAALNFSAVTEAPVIFICRNNGWAISTPISDQFRSDGAVVKGRAYGVRSIRVDGNDALAIYSAVHAAREMAIGEGRPILIEALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSPS 758 ++G A N +A+ + P +FIC NN + + T S +G + ++VDG D L + A A PIL+E TYR H+ SD YR +EI+ R+ +DP+ + + ++ + E+ + VRK+I A Q A +P + +L +Y S Sbjct: 198 NQGQIAEAFNMAALWKLPCVFICENNLYGMGTSTERAAASPDYYKRGNF--IPGLKVDGMDVLCVREATKFAANYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKRDPIIILQDRMVNSKLATVEELKEIGAEVRKEIDDAAQFATTDPEPHLEELGHHIYSSDSS 372 The following BLAST results are available for this feature:
BLAST of CV713027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CV713027 ID=CV713027; Name=CV713027; organism=Citrus sinensis; type=EST; length=759bpback to top |