CV712873

Overview
NameCV712873
Unique NameCV712873
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712873 vs. ExPASy Swiss-Prot
Match: PDR5_ORYSJ (Pleiotropic drug resistance protein 5 OS=Oryza sativa subsp. japonica GN=PDR5 PE=2 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 5.888e-55
Identity = 109/229 (47.60%), Postives = 140/229 (61.14%), Query Frame = -1
Query:   46 DLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKXXXXXXXXXXXXXXXXXFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQDRL------ESGETVKQFLRSYYGFKHDFLGXXXXXVFVLPSLFAFVFALGIRVLNFQKR 714
            DL N +G  Y AV+FLG  N+ ++ PVV +ER+VFYREK AGMYSP++YAFAQ  +E  Y  VQ   Y++++Y+MIG+EW A K                 F MMLVA T +  +A+++ +     WN  +GFIIPR  IPVWWRW YWANP++WT+YG  ASQF D  DR+       +   VK FL    GFKHDFLG      F    +F F+F  GI+ LNFQKR
Sbjct: 1227 DLNNLLGATYAAVFFLGAANLLTLLPVVSVERTVFYREKAAGMYSPLSYAFAQGFVEFCYSAVQGVLYTILIYSMIGYEWKADKFFYFLFFMIAAFAYFTLFSMMLVACTASEMLAAVLVSFVLSSWNNFAGFIIPRPLIPVWWRWFYWANPVSWTIYGVIASQFAD-SDRVVTVPGQSTTMVVKDFLEKNMGFKHDFLGYVVLAHFGYVIIFFFLFGYGIKCLNFQKR 1454          
BLAST of CV712873 vs. ExPASy Swiss-Prot
Match: AB31G_ARATH (ABC transporter G family member 31 OS=Arabidopsis thaliana GN=ABCG31 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.004e-54
Identity = 105/227 (46.26%), Postives = 140/227 (61.67%), Query Frame = -1
Query:   46 QDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKXXXXXXXXXXXXXXXXXFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQDRLES---GETVKQFLRSYYGFKHDFLGXXXXXVFVLPSLFAFVFALGIRVLNFQKR 717
            QDL   MG +Y A  FLGV N SSVQP+V +ER+VFYREK AGMY+P+ YA AQ L+EIPYI  Q   Y +I Y  IGFE T +K                 +GMM V  TPN H+A+++S+ FY LWN++SGF++ +  IPVWW W Y+  P+AWTL G   SQ GDV+  +       TVK+F+  Y+G+K + +G     +    +LF   FAL ++ LNFQ+R
Sbjct: 1200 QDLITVMGALYSACLFLGVSNASSVQPIVSIERTVFYREKAAGMYAPIPYAAAQGLVEIPYILTQTILYGVITYFTIGFERTFSKFVLYLVFMFLTFTYFTFYGMMAVGLTPNQHLAAVISSAFYSLWNLLSGFLVQKPLIPVWWIWFYYICPVAWTLQGVILSQLGDVESMINEPLFHGTVKEFIEYYFGYKPNMIGVSAAVLVGFCALFFSAFALSVKYLNFQRR 1426          
BLAST of CV712873 vs. ExPASy Swiss-Prot
Match: AB38G_ARATH (ABC transporter G family member 38 OS=Arabidopsis thaliana GN=ABCG38 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.312e-54
Identity = 101/225 (44.89%), Postives = 146/225 (64.89%), Query Frame = -1
Query:   46 QQDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKXXXXXXXXXXXXXXXXXFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQDRLESGETVKQFLRSYYGFKHDFLGXXXXXVFVLPSLFAFVFALGIRVLNFQKR 720
            +QD+FN++G M   V FL   + ++V+PVV  ER+VFYRE GAGMYS + YAF+QV+IEIPY   QA  Y +IVY MIG+EWTA+K                  G+M+++ +PN  IASI++ +    WN+ SGF IPR R+ VW RW  +  P  W LYG   +Q+GDV+ RL++GETV +F+++YYG++++FL      +      F F++A  +++LNFQKR
Sbjct: 1194 RQDIFNSVGAMSTVVGFLSSQSAATVRPVVIAERTVFYREAGAGMYSALPYAFSQVIIEIPYTMAQACIYGVIVYGMIGYEWTASKFFLNIFFTFISILYSIYTGIMVISVSPNQEIASILNGVISTSWNVFSGFTIPRPRMHVWLRWFTYVCPGWWGLYGLTIAQYGDVETRLDTGETVVEFMKNYYGYEYNFLWVVSLTLIAFSMFFVFIYAFSVKILNFQKR 1418          
BLAST of CV712873 vs. ExPASy Swiss-Prot
Match: PDR3_TOBAC (Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum GN=PDR3 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.828e-49
Identity = 97/228 (42.54%), Postives = 137/228 (60.09%), Query Frame = -1
Query:   46 QQDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKXXXXXXXXXXXXXXXXXFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQDRL---ESGETVKQFLRSYYGFKHDFLGXXXXXVFVLPSLFAFVFALGIRVLNFQKR 720
            QQ +F+  G M+ AV F G+ N SSV P V  ERSV YRE+ AGMY+  AYA AQV IEIPY+  QA  +++I Y MIG+ W+A K                  GMMLV+ TP+  +A+I+ + FY ++N+ +GF++P+ +IP WW W Y+  P +WTL G   SQ+GD++  +   +  +TV  FL  Y+GF H+ L      +   P +FA +FA  I  LNFQ+R
Sbjct: 1220 QQSVFSVFGAMFTAVIFCGINNSSSVLPYVTTERSVLYRERFAGMYASWAYALAQVAIEIPYLLAQALAFTVITYPMIGYYWSAYKVFWYFYSMFCTLLYFTYLGMMLVSMTPSFPVAAILQSSFYTMFNLFAGFLMPKAQIPKWWIWFYYLTPTSWTLNGMLTSQYGDIEKEITVFQEKKTVAAFLGDYFGFHHNQLPIVAFVLIAYPLVFASLFAFFIGKLNFQRR 1447          
BLAST of CV712873 vs. ExPASy Swiss-Prot
Match: AB37G_ARATH (ABC transporter G family member 37 OS=Arabidopsis thaliana GN=ABCG37 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.189e-47
Identity = 95/228 (41.67%), Postives = 132/228 (57.89%), Query Frame = -1
Query:   46 QQDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKXXXXXXXXXXXXXXXXXFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQDRLE---SGETVKQFLRSYYGFKHDFLGXXXXXVFVLPSLFAFVFALGIRVLNFQKR 720
            QQ +F   G +Y  V FLG+ N +S     + ER+V YRE+ AGMYS  AYA  QV+ EIPYIF+QAA + ++ Y MIGF  +A K                   M LV+ TPN  +A+I+ +LFY  +N+ SGF+IP+T++P WW W Y+  P +WTL GF +SQ+GD+ + +       TV +FL+ Y+GF HD L          P   A +FA  +  LNFQ+R
Sbjct: 1223 QQSMFTVFGAIYGLVLFLGINNCASALQYFETERNVMYRERFAGMYSATAYALGQVVTEIPYIFIQAAEFVIVTYPMIGFYPSAYKVFWSLYSMFCSLLTFNYLAMFLVSITPNFMVAAILQSLFYVGFNLFSGFLIPQTQVPGWWIWLYYLTPTSWTLNGFISSQYGDIHEEINVFGQSTTVARFLKDYFGFHHDLLAVTAVVQIAFPIALASMFAFFVGKLNFQRR 1450          
BLAST of CV712873 vs. ExPASy Swiss-Prot
Match: PDR13_ORYSJ (Pleiotropic drug resistance protein 13 OS=Oryza sativa subsp. japonica GN=PDR13 PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.029e-47
Identity = 98/229 (42.79%), Postives = 133/229 (58.08%), Query Frame = -1
Query:   49 QDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQV---LIEIPYIFVQAAPYSLIVYAMIGFEWTAAKXXXXXXXXXXXXXXXXXFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQDRLES---GETVKQFLRSYYGFKHDFLGXXXXXVFVLPSLFAFVFALGIRVLNFQK 717
            +D+   MG +Y A  FLGV N SSVQPVV +ER+V+YRE+ A MYS   YA AQV   L+EIPYI VQ   + LI Y M+ +E    K                 +GM+ V  TP  H+AS+VS+ FY LWN++SGF+IP++RIP WW W Y+  P+AWTL G   SQ GDV  R+       TV +FL+   GF+    G     +      F  ++A+ I+++NFQ+
Sbjct: 1212 EDILLLMGALYAACLFLGVNNASSVQPVVSVERTVYYRERAANMYSSFPYAAAQVYHGLVEIPYIAVQTLIFGLITYFMVNYERNIRKLVLYLIYMFLTFTYFTFYGMVAVGLTPTQHMASVVSSAFYSLWNLLSGFLIPQSRIPGWWIWFYYICPVAWTLRGVITSQLGDVDTRIVGPGFDGTVHEFLQQNLGFEQGMTGATVAVLVAFSVFFFSIYAISIKMINFQR 1440          
BLAST of CV712873 vs. ExPASy Swiss-Prot
Match: AB33G_ARATH (ABC transporter G family member 33 OS=Arabidopsis thaliana GN=ABCG33 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.717e-46
Identity = 94/228 (41.23%), Postives = 137/228 (60.09%), Query Frame = -1
Query:   46 QQDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKXXXXXXXXXXXXXXXXXFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQDRLES-GE--TVKQFLRSYYGFKHDFLGXXXXXVFVLPSLFAFVFALGIRVLNFQKR 720
            QQ+LF  +G +Y  V F+G+ N +S     + ER+V YRE+ AGMYS  AYA AQV+ EIPYIF+Q+A + +++Y MIGF  + +K                   M L++ TPN  +A+I+ +LF+  +NI +GF+IP+ +IP WW W Y+  P +WTL  FF+SQ+GD+  ++ + GE  TV  FL  Y+GF HD L      +   P   A ++A  +  LNFQKR
Sbjct: 1186 QQNLFTVLGAIYGLVLFVGINNCTSALQYFETERNVMYRERFAGMYSAFAYALAQVVTEIPYIFIQSAEFVIVIYPMIGFYASFSKVFWSLYAMFCNLLCFNYLAMFLISITPNFMVAAILQSLFFTTFNIFAGFLIPKPQIPKWWVWFYYITPTSWTLNLFFSSQYGDIHQKINAFGETKTVASFLEDYFGFHHDRLMITAIILIAFPIALATMYAFFVAKLNFQKR 1413          
BLAST of CV712873 vs. ExPASy Swiss-Prot
Match: AB43G_ARATH (ABC transporter G family member 43 OS=Arabidopsis thaliana GN=ABCG43 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.454e-45
Identity = 95/228 (41.67%), Postives = 133/228 (58.33%), Query Frame = -1
Query:   46 QQDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKXXXXXXXXXXXXXXXXXFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQ-DRLESGE--TVKQFLRSYYGFKHDFLGXXXXXVFVLPSLFAFVFALGIRVLNFQKR 720
            QQDLFN  G M+  V F G+ N S+V   V  ER+VFYRE+ + MY+P AY+ AQVL+EIPY   Q+  Y +IVY M+G+ W+  K                 FGM+LV  TPN HIA  + + FY + N+ +G+++P+  IP WW W Y+ +P +W L G   SQ+GD++ + L  GE   V  FL  Y+G+++D L      +   P L A +FA  I  LNFQK+
Sbjct: 1163 QQDLFNVFGSMFTVVLFSGINNCSTVIFCVATERNVFYRERFSRMYNPWAYSLAQVLVEIPYSLFQSIIYVIIVYPMVGYHWSVYKVFWSFYSIFCSLLIFNYFGMLLVVVTPNVHIAFTLRSSFYAIVNLFAGYVMPKPNIPRWWIWMYYLSPTSWVLNGLLTSQYGDMEKEILAFGEKKKVSAFLEDYFGYRYDSLALVAVVLIAFPILLASLFAFFIGKLNFQKK 1390          
BLAST of CV712873 vs. ExPASy Swiss-Prot
Match: AB41G_ARATH (ABC transporter G family member 41 OS=Arabidopsis thaliana GN=ABCG41 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.524e-45
Identity = 88/228 (38.60%), Postives = 134/228 (58.77%), Query Frame = -1
Query:   46 QQDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKXXXXXXXXXXXXXXXXXFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQDRLE---SGETVKQFLRSYYGFKHDFLGXXXXXVFVLPSLFAFVFALGIRVLNFQKR 720
            QQDLF+  G MY  V F G+ N ++V   +  ER+VFYRE+ A MYS  AY+F+QVL+E+PY  +Q+   ++IVY MIG+  +  K                  GM++VA TPN H+A  + + F+ + N+ +GF++P+ +IP WW W Y+ +P +W L G  +SQ+GDV+  +      ++V  FL  Y+G+KHD L      +   P + A +FA  +  LNFQK+
Sbjct: 1170 QQDLFSIFGSMYTIVIFSGINNCATVMNFIATERNVFYRERFARMYSSWAYSFSQVLVEVPYSLLQSLLCTIIVYPMIGYHMSVYKMFWSLYSIFCSLLIFNYCGMLMVALTPNIHMALTLRSTFFSMVNLFAGFVMPKQKIPKWWIWMYYLSPTSWVLEGLLSSQYGDVEKEITVFGEKKSVSAFLEDYFGYKHDSLAVVAFVLIAFPIIVASLFAFFMSKLNFQKK 1397          
BLAST of CV712873 vs. ExPASy Swiss-Prot
Match: AB42G_ARATH (ABC transporter G family member 42 OS=Arabidopsis thaliana GN=ABCG42 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 7.215e-45
Identity = 94/228 (41.23%), Postives = 132/228 (57.89%), Query Frame = -1
Query:   46 QQDLFNTMGFMYVAVYFLGVLNVSSVQPVVDLERSVFYREKGAGMYSPMAYAFAQVLIEIPYIFVQAAPYSLIVYAMIGFEWTAAKXXXXXXXXXXXXXXXXXFGMMLVAWTPNHHIASIVSTLFYGLWNIVSGFIIPRTRIPVWWRWSYWANPIAWTLYGFFASQFGDVQ-DRLESGE--TVKQFLRSYYGFKHDFLGXXXXXVFVLPSLFAFVFALGIRVLNFQKR 720
            QQDLFN  G M+  V F G+ N S+V   V  ER+VFYRE+ + MY+  AY+ AQVL+EIPY   Q+  Y +IVY M+G+ W+  K                 FGM+LV  TPN HIA  + + FY + N+ +G+++P+  IP WW W Y+ +P +W L G   SQ+GD++ + L  GE   V  FL  Y+G+++D L      +   P L A +FA  I  LNFQK+
Sbjct: 1165 QQDLFNVFGSMFTVVLFSGINNCSTVLFSVATERNVFYRERFSRMYNSWAYSLAQVLVEIPYSLFQSIVYVIIVYPMVGYHWSVFKVFWSFYSIFCTLLIFNYFGMLLVVVTPNVHIAFTLRSSFYAIVNLFAGYVMPKPNIPRWWIWMYYLSPTSWVLNGLLTSQYGDMEKEILAFGEKKKVSDFLEDYFGYRYDSLALVAVVLIAFPILLASLFAFFIGKLNFQKK 1392          
The following BLAST results are available for this feature:
BLAST of CV712873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
PDR5_ORYSJ5.888e-5547.60Pleiotropic drug resistance protein 5 OS=Oryza sat... [more]
AB31G_ARATH1.004e-5446.26ABC transporter G family member 31 OS=Arabidopsis ... [more]
AB38G_ARATH1.312e-5444.89ABC transporter G family member 38 OS=Arabidopsis ... [more]
PDR3_TOBAC4.828e-4942.54Pleiotropic drug resistance protein 3 OS=Nicotiana... [more]
AB37G_ARATH1.189e-4741.67ABC transporter G family member 37 OS=Arabidopsis ... [more]
PDR13_ORYSJ2.029e-4742.79Pleiotropic drug resistance protein 13 OS=Oryza sa... [more]
AB33G_ARATH1.717e-4641.23ABC transporter G family member 33 OS=Arabidopsis ... [more]
AB43G_ARATH1.454e-4541.67ABC transporter G family member 43 OS=Arabidopsis ... [more]
AB41G_ARATH5.524e-4538.60ABC transporter G family member 41 OS=Arabidopsis ... [more]
AB42G_ARATH7.215e-4541.23ABC transporter G family member 42 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002A06_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712873 ID=CV712873; Name=CV712873; organism=Citrus sinensis; type=EST; length=723bp
CTGATCCAACGTGCAATAGTTTATAGGAAAAAAAAAAATTTTCTATCGCT
TTTGGAAGTTAAGCACCCTAATTCCTAAAGCAAAGACAAAAGCAAAAAGC
GATGGCAATACAAAAACAACAGCTGCAACAGCTCCTAGAAAATCATGTTT
GAAGCCATAATAACTTCTCAAAAACTGTTTCACTGTTTCACCTGACTCAA
GCCTATCTTGTACATCTCCAAACTGTGATGCAAAAAATCCATACAATGTC
CAAGCTATAGGGTTTGCCCAGTAGGACCATCTCCACCATACAGGAATCCT
TGTTCTGGGGATAATGAACCCTGAAACGATGTTCCATAATCCGTAAAATA
AAGTTGATACAATGCTAGCAATGTGGTGGTTTGGCGTCCAAGCCACAAGC
ATCATGCCAAAGAATGTGAAGTACAACAAGCTGAAGAACATGAAGAATAA
AAACCAAAAGAATTTCGCGGCAGTCCATTCGAATCCAATCATTGCATAGA
CTATAAGACTATATGGTGCAGCTTGAACAAATATATAAGGGATCTCAATT
AAAACTTGTGCAAAGGCATATGCCATGGGTGAATACATTCCGGCACCTTT
TTCTCTGTAGAAGACTGATCTTTCAAGATCTACTACTGGCTGCACTGACG
AAACATTTAGGACACCAAGGAAGTAAACGGCAACATACATGAAGCCCATT
GTATTAAACAGATCTTGTTGCTT
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