CV712872
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712872 vs. ExPASy Swiss-Prot
Match: DBP6_PICST (ATP-dependent RNA helicase DBP6 OS=Pichia stipitis GN=DBP6 PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11 Identity = 41/128 (32.03%), Postives = 70/128 (54.69%), Query Frame = 2 Query: 365 LPWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVW--------QETIGPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGLS 724 L W+ +P+ S + P + P L L+ ++ F VQ+A+ + + P + + D+ +N+ TGSGKTL+Y++PI++ L NR V +RA+V++PT+ L QVK F ++ LS Sbjct: 138 LDWLATPIYASPEDSKPFSEFE-ISPFLLKNLERDNFTTAFSVQIAIMDILLHDIKRNRLEPDV-KGDILVNAATGSGKTLAYSIPIIEALHNRVVPRVRAIVLVPTKPLINQVKATFVQLSRGTNLS 263
BLAST of CV712872 vs. ExPASy Swiss-Prot
Match: DBP6_ASPNC (ATP-dependent RNA helicase dbp6 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dbp6 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11 Identity = 45/119 (37.82%), Postives = 60/119 (50.42%), Query Frame = 2 Query: 368 PWMRSPVDVSLFEDCPLDHLPCLDPRLKVALQNMGISSLFPVQVAVWQETI-GPGLFERDLCINSPTGSGKTLSYALPIVQTLSNRAVRCLRALVVLPTRDLALQVKDVFAAIAPAVGL 721 PW+ +P+ S E L +D L L++ G F VQ V + GP DLCI++ TGSGKTLSY LP+V L LR L+V+PTR+L Q ++ A GL Sbjct: 107 PWLANPLRASAQERRKFADLG-IDSSLLRVLEDNGYREAFAVQSTVIPLLLQGPTNHPGDLCISAATGSGKTLSYVLPLVTALKPLPAPRLRGLIVVPTRELVKQAREACELCAAGSGL 224 The following BLAST results are available for this feature:
BLAST of CV712872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712872 ID=CV712872; Name=CV712872; organism=Citrus sinensis; type=EST; length=725bpback to top |