CV712869

Overview
NameCV712869
Unique NameCV712869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRI1_BRANA (Ferritin-1, chloroplastic OS=Brassica napus GN=LSC30 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.153e-52
Identity = 103/161 (63.98%), Postives = 122/161 (75.78%), Query Frame = -1
Query:  299 EAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLH 781
            EAAINEQINVEYNVSYVYH+M+AYFDRDNVALKGL               EK MEYQN+RGG+V L  I+ P+S+F+HAEKGDALYAME               LH+VA++N+D QLADFVESE+L EQ+EAIKKIS+++ QLR VG+GHGVWHFDQMLL+
Sbjct:   94 EAAINEQINVEYNVSYVYHSMYAYFDRDNVALKGLAKFFKESSDEEREHAEKFMEYQNQRGGRVTLHPIVSPISDFEHAEKGDALYAMELALSLEKLTNEKLLNLHRVASENNDPQLADFVESEFLGEQIEAIKKISDFITQLRMVGKGHGVWHFDQMLLN 254          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRI2_MAIZE (Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 7.024e-52
Identity = 106/163 (65.03%), Postives = 119/163 (73.01%), Query Frame = -1
Query:  302 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVG-QGHGVWHFDQMLL 787
            DCEAAINEQINVEYN SY YH++FAYFDRDNVALKG                EKLMEYQNKRGG+V+LQSI+ PL+EFDH EKGDALYAME               LH VA + +D QL DF+ESE+L EQ EAI K+S+YVAQLRRVG +GHGVWHFDQMLL
Sbjct:   86 DCEAAINEQINVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVAPLTEFDHPEKGDALYAMELTLALEKLVNEKLHSLHGVATRCNDPQLIDFIESEFLEEQGEAINKVSKYVAQLRRVGNKGHGVWHFDQMLL 248          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRI2_SOYBN (Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.553e-51
Identity = 102/168 (60.71%), Postives = 122/168 (72.62%), Query Frame = -1
Query:  284 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLHGEEVV 787
            D E+AINEQINVEYNVSYVYHA+FAYFDRDN+ALKGL               E+L++YQN RGG+V L  I  P SEF+H+EKGDALYAME               +H VA +N+D Q ADF+ESE+L+EQV++IKKI+EYVAQLR VG+GHGVWHFDQ LLH E+ V
Sbjct:   90 DSESAINEQINVEYNVSYVYHALFAYFDRDNIALKGLAKFFKESSEEEREHAEQLIKYQNIRGGRVVLHPITSPPSEFEHSEKGDALYAMELALSLEKLTNEKLLHVHSVAERNNDPQXADFIESEFLYEQVKSIKKIAEYVAQLRLVGKGHGVWHFDQKLLHDEDHV 257          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRI_PHAVU (Ferritin, chloroplastic OS=Phaseolus vulgaris GN=PFE PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.946e-51
Identity = 103/163 (63.19%), Postives = 116/163 (71.17%), Query Frame = -1
Query:  299 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLH 787
            +CE+AINEQINVEYN SYVYH++FAYFDRDNVALKG                EKLM+YQN RGG+V L  I    SEF+H EKGDALYAME               +H VA++N D QLADF+ESE+L EQVEAIKKISEYVAQLR VG+GHGVWHFDQ LLH
Sbjct:   87 ECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFARFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNVPSEFEHVEKGDALYAMELALSLEKLVNEKLRSVHSVADRNKDPQLADFIESEFLSEQVEAIKKISEYVAQLRMVGKGHGVWHFDQSLLH 249          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRI3_VIGUN (Ferritin-3, chloroplastic OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.946e-51
Identity = 101/163 (61.96%), Postives = 119/163 (73.01%), Query Frame = -1
Query:  299 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLH 787
            + EAAINEQINVEYNVSYVYH++FAYFDRDN+ALKGL               EKL++YQN RGG+V L  I  P SEF+H EKGDALYAME               +H VA++N+D QLADF+ESE+L+EQVE+IKKI+EYV QLR VG+GHGVWHFDQ LLH
Sbjct:   93 EAEAAINEQINVEYNVSYVYHSLFAYFDRDNIALKGLAKFFKESSEEEREHAEKLIKYQNIRGGRVVLHPITSPPSEFEHPEKGDALYAMELALSLEKLTNEKLLYVHSVADRNNDAQLADFIESEFLNEQVESIKKIAEYVTQLRLVGKGHGVWHFDQRLLH 255          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRI_MALXI (Ferritin, chloroplastic OS=Malus xiaojinensis PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.325e-50
Identity = 101/162 (62.35%), Postives = 118/162 (72.84%), Query Frame = -1
Query:  302 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLL 787
            +CE+AINEQINVEYN SYVYH++FAYFDRDNVALKG                EKLM+YQN RGG+V L +I    SEF+H EKGDALYAME               +H VA++N+D Q+ADF+ESE+L EQVE+IKKISEYVAQLRRVG+GHGVWHFDQ LL
Sbjct:   88 ECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHAIKNVPSEFEHVEKGDALYAMELALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVESIKKISEYVAQLRRVGKGHGVWHFDQRLL 249          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRI1_SOYBN (Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4)

HSP 1 Score: 199.519 bits (506), Expect = 1.730e-50
Identity = 101/162 (62.35%), Postives = 117/162 (72.22%), Query Frame = -1
Query:  302 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLL 787
            +CE+AINEQINVEYN SYVYH++FAYFDRDNVALKG                EKLM+YQN RGG+V L  I    SEF+H EKGDALYAME               +H VA++N+D Q+ADF+ESE+L EQVE+IKKISEYVAQLRRVG+GHGVWHFDQ LL
Sbjct:   88 ECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNAPSEFEHVEKGDALYAMELALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVESIKKISEYVAQLRRVGKGHGVWHFDQRLL 249          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRI1_PEA (Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 2.951e-50
Identity = 100/164 (60.98%), Postives = 115/164 (70.12%), Query Frame = -1
Query:  296 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLHG 787
            +CE+ INEQINVEYN SYVYH++FAYFDRDNVALKG                EKLM+YQN RGG+V L  I    SEF+H EKGDALYAME               +H VA +N+D+++  F+E EYL EQVEAIKKISEYVAQLRRVG+GHGVWHFDQ LLHG
Sbjct:   86 ECESVINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEHREHAEKLMKYQNTRGGRVVLHPIKDVPSEFEHVEKGDALYAMELALSLEKLTNEKLLNVHSVAERNNDLEMTHFIEGEYLAEQVEAIKKISEYVAQLRRVGKGHGVWHFDQRLLHG 249          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRIS_LYMST (Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 3.510e-27
Identity = 70/162 (43.21%), Postives = 92/162 (56.79%), Query Frame = -1
Query:  302 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLL 787
            + EA IN QIN+E   SY Y +M  YFDRD+VAL G                EKLM+YQNKRGG++ LQ I  P    D  E G  L AM+               LHK+   + D Q+ADF+ESE+L EQV++IK++S+Y+  L+RVG G G + FD+  L
Sbjct:   13 ESEAGINRQINMELYASYSYQSMAYYFDRDDVALPGFHKFFKHQSEEEREHAEKLMKYQNKRGGRIVLQDIKKP----DRDEWGTGLEAMQVALQLEKSVNQSLLDLHKLCTSHDDAQMADFLESEFLEEQVKSIKELSDYITNLKRVGPGLGEYIFDKETL 170          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRI2_RANCA (Ferritin, middle subunit OS=Rana catesbeiana PE=1 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 9.559e-25
Identity = 66/162 (40.74%), Postives = 90/162 (55.56%), Query Frame = -1
Query:  311 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQ 787
            DCEAA+N  +N+E   SY Y +M+A+FDRD+VAL  +               EK M+YQNKRGG+V LQ I  P    +  E G+ L AM+               LHK+A    D  L DF+ESEYL EQV+ IK+I +++  L+R+G    G G + FD+
Sbjct:   12 DCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMKYQNKRGGRVVLQDIKKP----ERDEWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVDPHLCDFLESEYLEEQVKDIKRIGDFITNLKRLGLPENGMGEYLFDK 169          
The following BLAST results are available for this feature:
BLAST of CV712869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
FRI1_BRANA3.153e-5263.98Ferritin-1, chloroplastic OS=Brassica napus GN=LSC... [more]
FRI2_MAIZE7.024e-5265.03Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1... [more]
FRI2_SOYBN4.553e-5160.71Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI_PHAVU5.946e-5163.19Ferritin, chloroplastic OS=Phaseolus vulgaris GN=P... [more]
FRI3_VIGUN5.946e-5161.96Ferritin-3, chloroplastic OS=Vigna unguiculata PE=... [more]
FRI_MALXI1.325e-5062.35Ferritin, chloroplastic OS=Malus xiaojinensis PE=3... [more]
FRI1_SOYBN1.730e-5062.35Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4[more]
FRI1_PEA2.951e-5060.98Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV... [more]
FRIS_LYMST3.510e-2743.21Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2[more]
FRI2_RANCA9.559e-2540.74Ferritin, middle subunit OS=Rana catesbeiana PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002A04_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712869 ID=CV712869; Name=CV712869; organism=Citrus sinensis; type=EST; length=787bp
TTTTTTTTTTTTTTTTTAAAATCAAGCAACAATTATATATTATATAATTC
ACCCAAATTGCAAGATTGAACTTCAGAGGACTCCTACAGAGAAAGAAAGT
CAGATAAGCCTGATGTACCCCATATGCCATTCATCTATCAACACAATGTA
AAAGTTTCTGCACTAATTGCATGCCTGAAAGTTTCTAAATTAAGAACTAG
TGAACAAAAAAACAAAAACAACATAAAGATCAAGCCTTAGTAGGGATAGT
CAGGTGACAAGCAAGATGTGTCCACCATCATGCGACGACTTCCTCCCCAT
GGAGCAGCATTTGATCAAAGTGCCAGACACCATGCCCCTGGCCAACTCTT
CTCAGCTGAGCAACATATTCAGATATCTTTTTGATGGCTTCTACCTGCTC
ATGTAAATACTCGCTTTCAACGAAATCTGCCAACTGCACATCATGGTTCT
TGTTGGCCACCTTGTGCAAGTTGAGGAGTTTCTCATTTGTTAGCTTCTCC
AGAGACAGCGTAAGCTCCATGGCATACAAAGCATCTCCTTTCTCAGCATG
ATCAAACTCAGAGAGAGGCATCAATATTGATTGCAGCTTCACTTTACCTC
CTCGTTTGTTCTGATATTCCATCAATTTCTCAGCATGCTCTCTTTCCTCT
TCACTTGATTCCTTGAAAAACTTGGCGAGACCCTTGAGCGCGACATTGTC
TCTGTCAAAGTAAGCAAACATGGCATGATACACATAGGAGACATTGTATT
CCACATTGATCTGCTCGTTGATTGCGGCCTCACAATC
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