CV712869

Overview
NameCV712869
Unique NameCV712869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRIH1_XENLA (Ferritin heavy chain 1 OS=Xenopus laevis PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.129e-24
Identity = 68/165 (41.21%), Postives = 92/165 (55.76%), Query Frame = -1
Query:  302 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQMLL 787
            DCEAAIN  +N+E   SYVY +M  YFDRD+VAL  +               EK ++YQNKRGG+V LQ I  P    +  E  + L AM+               LHK+A+   D QL DF+ESEYL EQV+A+K++ +Y+  L+R+G    G G + FD+  L
Sbjct:   12 DCEAAINRMVNLEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGRVVLQDIKKP----ERDEWSNTLEAMQAALQLEKTVNQALLDLHKLASDKVDPQLCDFLESEYLEEQVKAMKELGDYITNLKRLGVPQNGMGEYLFDKHTL 172          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRIH2_SCHMA (Ferritin-2 heavy chain OS=Schistosoma mansoni GN=SCM-2 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.781e-24
Identity = 67/164 (40.85%), Postives = 93/164 (56.71%), Query Frame = -1
Query:  299 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPL-SEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLH 787
            +CE AIN+QINVE   +Y Y A F YFDRD+V+                   EKL +YQNKR G+V+   I  P  +EF   E      AM                LH+VA+KN+D  LADF+ESE+LHEQ +AIK+ ++Y+ + +RVG+G G + FD++ L+
Sbjct:   13 ECENAINKQINVELQAAYDYMAFFTYFDRDDVSFPKAAEFFRKASHEEREHAEKLAKYQNKRVGRVQYSDINGPTKTEFSSLED-----AMNTALGMEKAVSKSLLELHEVASKNNDPALADFIESEFLHEQEDAIKQFADYLTETQRVGKGLGEYLFDKLTLN 171          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRIH2_XENLA (Ferritin heavy chain 2 OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.744e-24
Identity = 67/165 (40.61%), Postives = 91/165 (55.15%), Query Frame = -1
Query:  302 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQMLL 787
            DCEAAIN  +N+E   SYVY +M  YFDRD+VAL  +               EK ++YQNKRGG+V LQ I  P    +  E G+ L A +               LHK+A+   D  L DF+ESEYL EQV+A+K++ +Y+  L+R+G    G G + FD+  L
Sbjct:   12 DCEAAINRMVNMEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGRVVLQDIKKP----ERDEWGNTLEATQAALQLEKTVNQALLDLHKLASDKVDAHLCDFLESEYLEEQVKAMKQLGDYITNLKRLGVPQNGMGEYLFDKHTL 172          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRIH1_SCHMA (Ferritin-1 heavy chain OS=Schistosoma mansoni GN=SCM-1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.057e-23
Identity = 62/165 (37.58%), Postives = 85/165 (51.52%), Query Frame = -1
Query:  293 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLHGE 787
            +CEA +N+QIN+E   SYVY  M  +F+RD+VAL G                 KLM YQN RGG++ LQ I  P            L+AM+               L  V  ++ D    DF+ +EYL  QV+++KK+S+Y+  L RVG G G + FD+  LHGE
Sbjct:   11 ECEAGVNKQINMELYASYVYMTMAFHFNRDDVALNGFYKFFLNESEEERQHAIKLMTYQNMRGGRIVLQDISAP----PQLSWNSGLHAMQDALDLEKKVNQSLMELVAVGERHRDTHFCDFINNEYLEIQVQSMKKLSDYITNLIRVGNGLGEYTFDKETLHGE 171          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRIH_CHICK (Ferritin heavy chain OS=Gallus gallus GN=FTH PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.380e-23
Identity = 64/149 (42.95%), Postives = 85/149 (57.05%), Query Frame = -1
Query:  341 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVG 787
            DCEAAIN QIN+E   SYVY +M  YFDRD+VALK                 EKLM+ QN+RGG++ LQ I  P    D  +  + L AME               LHK+A + +D  L DF+E+ YL EQV+AIK++ ++V  LR++G
Sbjct:   15 DCEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWENGLTAMECALHLEKNVNQSLLELHKLATEKNDPHLCDFIETHYLDEQVKAIKQLGDHVTNLRKMG 159          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRIH_PAGBE (Ferritin, heavy subunit OS=Pagothenia bernacchii PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.354e-23
Identity = 65/165 (39.39%), Postives = 92/165 (55.76%), Query Frame = -1
Query:  302 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQMLL 787
            DCEAAIN QIN+E   SY Y +M  YFDRD+VAL G                EKL+++QN+RGG++ LQ +  P    D  E G  L A+E               LHKV ++++D  + DF+E+ YL EQV++IK++ ++V  LRR+G    G   + FD+  L
Sbjct:   12 DCEAAINRQINLELYASYSYLSMAYYFDRDDVALPGFAHFFKQQSEEEREHAEKLLKFQNQRGGRIFLQDVKKP----DRDEWGSGLDALECALQLEKNVNQSLLDLHKVCSEHNDPHMCDFLETHYLDEQVKSIKELGDWVTNLRRLGAPQNGMAEYLFDKHTL 172          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRIH_TRENE (Ferritin, heavy subunit OS=Trematomus newnesi PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.075e-23
Identity = 66/165 (40.00%), Postives = 91/165 (55.15%), Query Frame = -1
Query:  302 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQMLL 787
            DCEAAIN QIN+E   SY Y +M  YFDRD+VAL G                EKLM+ QN+RGG++ LQ +  P    D  E G  L A+E               LHKV ++++D  + DF+E+ YL EQV++IK++ ++V  LRR+G    G   + FD+  L
Sbjct:   12 DCEAAINRQINLELYASYSYLSMAYYFDRDDVALPGFAHFFKHQSEEEREHAEKLMKQQNQRGGRIFLQDVKKP----DRDEWGSGLDALECALQLEKNVNQSLLDLHKVCSEHNDPHMCDFLETHYLDEQVKSIKELGDWVTNLRRLGAPQNGMAEYLFDKHTL 172          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRIH_ECHGR (Ferritin heavy chain OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.075e-23
Identity = 67/166 (40.36%), Postives = 84/166 (50.60%), Query Frame = -1
Query:  290 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLHGEE 787
            +CE  IN QIN+E   SY+Y AM  +FDRD+VAL G                 KLM YQ  RGG++  Q I  P +     E    L AME               L  VANKN+D Q  +F+E E+L EQV  IKK++ YV  L+R G G G + FD+  L G E
Sbjct:   11 ECERGINRQINMELYASYLYLAMSQHFDRDDVALPGFREFFAKASEEEREHAIKLMRYQCGRGGRIVYQDIAKPQT----TEWASGLEAMEMALKIEREVNESLLALRGVANKNNDSQFCEFLEGEFLGEQVSDIKKLAGYVTNLKRCGPGLGEYIFDKETLQGGE 172          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRIH_HORSE (Ferritin heavy chain OS=Equus caballus GN=FTH1 PE=2 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 5.245e-23
Identity = 68/165 (41.21%), Postives = 91/165 (55.15%), Query Frame = -1
Query:  302 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQMLL 787
            D EAAIN QIN+E + SYVY +M  YFDRD+VALK                 EKLM+ QN+RGG++ LQ I  P    D  +  + L AME               LHK+A   +D  L DF+E+ YL+EQV+AIK++ ++V  LRR+G    G   + FD+  L
Sbjct:   16 DSEAAINRQINLELHASYVYLSMSFYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DQDDWENGLKAMECALHLEKNVNESLLELHKLATDKNDPHLCDFLETHYLNEQVKAIKELGDHVTNLRRMGAPESGMAEYLFDKHTL 176          
BLAST of CV712869 vs. ExPASy Swiss-Prot
Match: FRI1_RANCA (Ferritin, higher subunit OS=Rana catesbeiana PE=1 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 5.245e-23
Identity = 63/162 (38.89%), Postives = 89/162 (54.94%), Query Frame = -1
Query:  311 DCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXEKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXLHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQ 787
            DCEAAIN  +N+E   SY Y +M  YFDRD++AL  +               EKLM+ QNKRGG++ LQ +  P    +  E G+ L AM+               LHKV +   D  L DF+E+EYL EQV++IK++ +Y+  L+R+G    G G + FD+
Sbjct:   12 DCEAAINRMVNMELYASYTYLSMAFYFDRDDIALHNVAKFFKEQSHEEREHAEKLMKDQNKRGGRIVLQDVKKP----ERDEWGNTLEAMQAALQLEKTVNQALLDLHKVGSDKVDPHLCDFLETEYLEEQVKSIKQLGDYITNLKRLGLPQNGMGEYLFDK 169          
The following BLAST results are available for this feature:
BLAST of CV712869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
FRIH1_XENLA2.129e-2441.21Ferritin heavy chain 1 OS=Xenopus laevis PE=2 SV=2[more]
FRIH2_SCHMA2.781e-2440.85Ferritin-2 heavy chain OS=Schistosoma mansoni GN=S... [more]
FRIH2_XENLA4.744e-2440.61Ferritin heavy chain 2 OS=Xenopus laevis PE=2 SV=1[more]
FRIH1_SCHMA1.057e-2337.58Ferritin-1 heavy chain OS=Schistosoma mansoni GN=S... [more]
FRIH_CHICK1.380e-2342.95Ferritin heavy chain OS=Gallus gallus GN=FTH PE=2 ... [more]
FRIH_PAGBE2.354e-2339.39Ferritin, heavy subunit OS=Pagothenia bernacchii P... [more]
FRIH_TRENE3.075e-2340.00Ferritin, heavy subunit OS=Trematomus newnesi PE=1... [more]
FRIH_ECHGR3.075e-2340.36Ferritin heavy chain OS=Echinococcus granulosus PE... [more]
FRIH_HORSE5.245e-2341.21Ferritin heavy chain OS=Equus caballus GN=FTH1 PE=... [more]
FRI1_RANCA5.245e-2338.89Ferritin, higher subunit OS=Rana catesbeiana PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0002A04_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0002A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712869 ID=CV712869; Name=CV712869; organism=Citrus sinensis; type=EST; length=787bp
TTTTTTTTTTTTTTTTTAAAATCAAGCAACAATTATATATTATATAATTC
ACCCAAATTGCAAGATTGAACTTCAGAGGACTCCTACAGAGAAAGAAAGT
CAGATAAGCCTGATGTACCCCATATGCCATTCATCTATCAACACAATGTA
AAAGTTTCTGCACTAATTGCATGCCTGAAAGTTTCTAAATTAAGAACTAG
TGAACAAAAAAACAAAAACAACATAAAGATCAAGCCTTAGTAGGGATAGT
CAGGTGACAAGCAAGATGTGTCCACCATCATGCGACGACTTCCTCCCCAT
GGAGCAGCATTTGATCAAAGTGCCAGACACCATGCCCCTGGCCAACTCTT
CTCAGCTGAGCAACATATTCAGATATCTTTTTGATGGCTTCTACCTGCTC
ATGTAAATACTCGCTTTCAACGAAATCTGCCAACTGCACATCATGGTTCT
TGTTGGCCACCTTGTGCAAGTTGAGGAGTTTCTCATTTGTTAGCTTCTCC
AGAGACAGCGTAAGCTCCATGGCATACAAAGCATCTCCTTTCTCAGCATG
ATCAAACTCAGAGAGAGGCATCAATATTGATTGCAGCTTCACTTTACCTC
CTCGTTTGTTCTGATATTCCATCAATTTCTCAGCATGCTCTCTTTCCTCT
TCACTTGATTCCTTGAAAAACTTGGCGAGACCCTTGAGCGCGACATTGTC
TCTGTCAAAGTAAGCAAACATGGCATGATACACATAGGAGACATTGTATT
CCACATTGATCTGCTCGTTGATTGCGGCCTCACAATC
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