CV712801
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_BARBK (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=dxs PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 9.187e-57 Identity = 116/207 (56.04%), Postives = 145/207 (70.05%), Query Frame = -2 Query: 150 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG-QTREALEI 767 GSFD+ F+A LP VVMAPSDE EL HMV TAA D P FRYPRG GIG++LP +G LE+GKGR+L EG RVAL+ +GT + L A+ L + G+ TVADARF KPLD L+R LA+ HEV IT+EEG+IGGFG+HV+QFLA + LL+ +K R L LPD Y++HGSP L++ GL I VF LG +TR+ L+I Sbjct: 434 GSFDIVFLATLPEFVVMAPSDEVELMHMVRTAAVYDQGPISFRYPRGEGIGMDLP--QRGEVLEIGKGRVLREGSRVALVCFGTQLSEVLVAADELAAEGISTTVADARFAKPLDKDLMRRLAREHEVFITIEEGAIGGFGAHVLQFLAQEALLEHGLKVRTLRLPDEYLNHGSPEKILSRVGLDAKGIINAVFTSLGYETRKTLQI 638
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_BARHE (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella henselae GN=dxs PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.200e-56 Identity = 113/199 (56.78%), Postives = 142/199 (71.36%), Query Frame = -2 Query: 171 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 767 GSFD+ F+ LP VVMAPSDE EL HMV TAAA D P FRYPRG GIG++LP +G LE+GKGRIL EG R+AL+ +GT + L A+ L + GL TVADARF KPLD L+R LA+ HEVL+T+EEG+IGGFG+H++QFLA +GLL+ +K R L LPD Y++HGS L++ GL I TVF+ LG+ Sbjct: 434 GSFDIVFLTTLPEFVVMAPSDEVELMHMVRTAAAYDQGPISFRYPRGEGIGMDLP--QRGEILEIGKGRILHEGNRIALVCFGTRISEVLVAADELSAEGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAIGGFGAHLLQFLAQEGLLEHGLKVRTLKLPDEYLNHGSQEKVLSRIGLDAVGIVNTVFSALGR 630
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_AGRRK (1-deoxy-D-xylulose-5-phosphate synthase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=dxs PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.200e-56 Identity = 116/200 (58.00%), Postives = 143/200 (71.50%), Query Frame = -2 Query: 168 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQT 767 GSFD TF+A LP VVMA +DEAEL HMV TAAA D P FRYPRG G+G+E+P +G LE+GKGRI+ +G +VALL +GT + LAA+ L++ GL TVADARF KPLDH LIR LA HEVLIT+EEGS+GGFGS V+QFLA +GLLD +K R LV+PD +++ P A AGL + I TVF LG++ Sbjct: 434 GSFDTTFLATLPGFVVMAAADEAELKHMVRTAAAYDLGPISFRYPRGEGVGIEMP--ERGQILEIGKGRIVKQGSKVALLSFGTRLADSLAAAEDLDAAGLPTTVADARFAKPLDHDLIRQLASHHEVLITIEEGSVGGFGSQVMQFLASEGLLDNGLKIRTLVMPDIWVEQAKPEVMNAMAGLDRAGIVQTVFKALGRS 631
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_NITHX (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=dxs PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.673e-56 Identity = 114/200 (57.00%), Postives = 139/200 (69.50%), Query Frame = -2 Query: 171 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 767 GSFD ++ CLPN V+MA SDEAEL HMVAT AI+DRPS RYPRG G GVE+P G+PL +GKGRI+ +G +VALL GT + C A+ L +HGL T+ADARF KPLD L+ LA+ H+VLIT+EEGSIGGFGSHV+Q LA G LD G V+ R +VLPD ++DH +P A GL I A VF LG+ Sbjct: 461 GSFDNAYLGCLPNFVIMAASDEAELVHMVATQVAINDRPSAVRYPRGEGRGVEMP--EVGVPLPIGKGRIVRQGSKVALLSLGTRLAECEKAADELAAHGLSTTIADARFMKPLDVDLVLKLARDHDVLITIEEGSIGGFGSHVMQTLAEHGALDSGQVRVRAMVLPDEFLDHDTPNAMYASVGLDDRGIVAKVFEALGK 658
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_BART1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=dxs PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 3.491e-56 Identity = 111/199 (55.78%), Postives = 141/199 (70.85%), Query Frame = -2 Query: 171 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 767 GSFD+ F+A LP VVMAPSDE EL HMV TAAA D P FRYPRG GIG++LP +G LE+GKGR+L EG R+AL+ +GT + L A+ L + GL TVADARF KPLD L+R LA+ HEVL+T+EEG+IGGFG+H++QFLA +GLL+ +K R L PD Y++HGSP L+ GL I TV ++G+ Sbjct: 434 GSFDIVFLATLPEFVVMAPSDELELMHMVRTAAAYDQGPISFRYPRGEGIGIDLP--QRGEILEIGKGRVLREGNRIALVCFGTRMSEVLRAADRLGAKGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAIGGFGAHLLQFLAQEGLLEHGLKVRTLKFPDEYLNHGSPEKVLSTIGLDAMGIVNTVLTVVGR 630
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_RHIL3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=dxs PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 4.559e-56 Identity = 113/199 (56.78%), Postives = 141/199 (70.85%), Query Frame = -2 Query: 171 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 767 GSFD F+ LP VVMA +DEAEL HMV TA A D P FRYPRG G+GV++P +G L++GKGRI+ EG +VALL +GT + CL A+ L++ GL TVADARF KPLDH LIR LA+ HE++ITVEEGSIGGFGSHV+ FLA +GLLD +K R LV+PD +++ P A AGL + I +TVF LG+ Sbjct: 434 GSFDTAFLTTLPGFVVMAAADEAELKHMVRTAVAYDGGPISFRYPRGEGVGVDMPA--RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHEMVITVEEGSIGGFGSHVMHFLATEGLLDNGLKLRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFKALGR 630
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_BARQU (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella quintana GN=dxs PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 5.955e-56 Identity = 113/199 (56.78%), Postives = 140/199 (70.35%), Query Frame = -2 Query: 171 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 767 GSFD+ F+A LP VVMAPSDE EL HMV TAAA D P FRYPRG G+G++LP +G LE+GKGR+L EG RVAL+ +GT + L A+ L + GL TVADARF KPLD L+R LA HEVL+ VEEG+IGGFG+H++QFLA +GLL+ +K R L PD Y++HGSP L++ GL I TVF LG+ Sbjct: 434 GSFDIVFLATLPEFVVMAPSDEVELMHMVRTAAAYDQGPISFRYPRGEGVGMDLP--QRGELLEIGKGRVLREGSRVALVCFGTRMSEVLVAADALIAEGLSTTVADARFAKPLDKDLMRRLACEHEVLVAVEEGAIGGFGAHLLQFLAKEGLLEHGLKVRTLKFPDEYLNHGSPEKVLSRIGLDAVGIVNTVFTALGR 630
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_RHIE6 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium etli (strain CIAT 652) GN=dxs PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.016e-55 Identity = 113/199 (56.78%), Postives = 142/199 (71.36%), Query Frame = -2 Query: 171 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 767 GSFD F+A LP VVMA +DEAEL HMV TA A D P FRYPRG G+GV++P +G L++GKGRI+ EG +VALL +GT + CL A+ LE+ GL TVADARF KPLDH LIR LA+ HE+LITVEEGS+GGFGS V+Q+L+ +GLLD +K R LV+PD +++ P A AGL + I +TVF LG+ Sbjct: 434 GSFDTAFLATLPGFVVMAAADEAELKHMVRTAVAYDAGPISFRYPRGEGVGVDMPA--RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLEAAGLSTTVADARFAKPLDHDLIRQLARHHEMLITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALGR 630
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_RHIEC (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=dxs PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.327e-55 Identity = 113/197 (57.36%), Postives = 141/197 (71.57%), Query Frame = -2 Query: 177 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 767 GSFD F+A LP VVMA +DEAEL HMV TAAA D P FRYPRG G+GV++P +G L++GKGRI+ EG +VALL +GT + CL AS LE+ GL TVADARF KPLDH L+R LA+ HE+LITVEEGS+GGFGS V+Q+L+ +GLLD +K R LV+PD +++ P A AGL + I +TVF L Sbjct: 434 GSFDTAFLATLPGFVVMAAADEAELKHMVRTAAAYDAGPISFRYPRGEGVGVDMPA--RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLASEDLEAAGLSTTVADARFAKPLDHELLRQLARHHEMLITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRAL 628
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_SILPO (1-deoxy-D-xylulose-5-phosphate synthase OS=Silicibacter pomeroyi GN=dxs PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.733e-55 Identity = 111/198 (56.06%), Postives = 140/198 (70.71%), Query Frame = -2 Query: 174 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 767 GSFD+ ++A LP MVVMA +DEAEL HMVATAAA DD P FRYPRG G+GVE+P G LE+GKGR++ +G RVALL +GT + A+ L + G+ T+ADARF KPLD LI +LA HE LIT+EEG++GGFGSHV Q LA +G+ D +K+R +VLPD +ID SPAD A AG+ I A V ++LG Sbjct: 438 GSFDIAYLANLPGMVVMAAADEAELVHMVATAAAHDDGPIAFRYPRGEGVGVEMP--ELGKVLEIGKGRMIQKGARVALLSFGTRLTEVQKAAEALAARGITPTIADARFAKPLDRDLILNLAHDHEALITIEEGAVGGFGSHVAQLLADEGVFDHGLKFRSMVLPDIFIDQSSPADMYAVAGMNAPQIEAKVLDVLG 633 The following BLAST results are available for this feature:
BLAST of CV712801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712801 ID=CV712801; Name=CV712801; organism=Citrus sinensis; type=EST; length=771bpback to top |